DR908304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908304 vs. ExPASy Swiss-Prot
Match: Y5208_ARATH (Uncharacterized protein At5g12080 OS=Arabidopsis thaliana GN=At5g12080 PE=1 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 9.787e-71 Identity = 124/188 (65.96%), Postives = 158/188 (84.04%), Query Frame = 1 Query: 25 WLLLMGIATTKVIVFLSSQFVAAAFVFGTTCRTIFEAIIFVFVMHPFDVGDRCVVDGVPLLVEEMNILTTIFLKLSNEKISYPNSVLATKPISNYNRSPDMSDTVEFSIAFATPIEKIGMLKERIKLYLENNSLHWHPNHSVVVKEIENVNKIKIALYCNHTMNFQEFGEKNNRRSALITELKKIFEN 588 WLLL+ +ATTKV++F S+Q VA AF+ G+TC+ +FE+I+FVFVMHP+DVGDRCVVDGV +LVEEMN+LTT+FLKL+NEK+ YPN+VLATKPISNY RSP+M +TVEFSI+F+TP+ KI LKERI YLE N HW P HSVVVKEIEN+NK+K+ALY +HT+ FQE E+N RR+ L +K++ E+ Sbjct: 529 WLLLLEVATTKVLLFFSTQLVALAFIIGSTCKNLFESIVFVFVMHPYDVGDRCVVDGVAMLVEEMNLLTTVFLKLNNEKVYYPNAVLATKPISNYFRSPNMGETVEFSISFSTPVSKIAHLKERIAEYLEQNPQHWAPVHSVVVKEIENMNKLKMALYSDHTITFQENRERNLRRTELSLAIKRMLED 716 HSP 2 Score: 23.8682 bits (50), Expect = 9.787e-71 Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 3 Query: 567 IKENF*ELEINYSLLPQQVHL 629 IK +L I+Y+LLPQ ++L Sbjct: 710 IKRMLEDLHIDYTLLPQDINL 730
BLAST of DR908304 vs. ExPASy Swiss-Prot
Match: Y1861_ARATH (Uncharacterized mscS family protein At1g78610 OS=Arabidopsis thaliana GN=At1g78610 PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.456e-57 Identity = 100/185 (54.05%), Postives = 139/185 (75.14%), Query Frame = 1 Query: 25 WLLLMGIATTKVIVFLSSQFVAAAFVFGTTCRTIFEAIIFVFVMHPFDVGDRCVVDGVPLLVEEMNILTTIFLKLSNEKISYPNSVLATKPISNYNRSPDMSDTVEFSIAFATPIEKIGMLKERIKLYLENNSLHWHPNHSVVVKEIENVNKIKIALYCNHTMNFQEFGEKNNRRSALITELKKI 579 WL+++GI +TK +V +SSQ V AF+FG C+ +FE+II++FV+HPFDVGDRC +DGV ++VEEMNILTT+FL+ N+K+ YPNS+L TK I NY RSPDM D +EFSI TP EKI ++K+RI Y+E HW+P +V K++E++N ++IA++ H MN Q+ GEK RRS L+ E+ KI Sbjct: 628 WLIILGITSTKFLVVMSSQVVVVAFIFGNMCKIVFESIIYLFVIHPFDVGDRCEIDGVQMVVEEMNILTTVFLRFDNQKVVYPNSLLWTKSIGNYYRSPDMGDGIEFSIHITTPAEKIILIKQRITSYIEGKKDHWYPAPMIVFKDMESLNSVRIAVWPTHRMNHQDMGEKWARRSQLVEEIAKI 812
BLAST of DR908304 vs. ExPASy Swiss-Prot
Match: YEYH_SCHPO (Uncharacterized mscS family protein C2C4.17c OS=Schizosaccharomyces pombe GN=SPAC2C4.17c PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16 Identity = 43/172 (25.00%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 58 VIVFLSSQFVAAAFVFGTTCRTIFEAIIFVFVMHPFDVGDRCVVDGVPLLVEEMNILTTIFLKLSNEKISYPNSVLATKPISNYNRSPDMSDTVEFSIAFATPIEKIGMLKERIKLYLENNSLHWHPNHSVVVKEIENVNKIKIALYCNHTMNFQEFGEKNNRRSALITELK 573 ++ + ++ +FVF T+ + + +IIF+F HPFD+ D +V+ + V +++L T+F + + PNS+L T I N RS S+T+ FAT +++ L++ + +++ N + P + V + ++ +K + + N+Q + RR+ + LK Sbjct: 472 ILAAFGTTLLSLSFVFSTSAQELMSSIIFLFSKHPFDISDVVIVNNIKYEVVSLSLLFTVFRTMGGSTVQAPNSLLNTLFIENLRRSQPQSETITIVSPFATDFKQLERLRDLLLTFVKENERDFRPIIDLNVSDFSTLDSLKFTVTYYYKSNWQNVSLQCVRRNKFMCALK 643
BLAST of DR908304 vs. ExPASy Swiss-Prot
Match: YC1B_SCHPO (Uncharacterized mscS family protein C1183.11 OS=Schizosaccharomyces pombe GN=SPCC1183.11 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.364e-15 Identity = 53/193 (27.46%), Postives = 107/193 (55.44%), Query Frame = 1 Query: 25 WLLLMGIATTKVIVFLSSQFVAAAFVFGTTCRTIFEAIIFVFVMHPFDVGDR--CVVDG--VPLLVEEMNILTTIFLKLSNEKISYPNSVLATKPISNYNRSPDMSDTVEFSIAFATPIEKIGMLKERIKLYLENNSLHWHPNHSVVVKEIENVNKIKIALYCNHTMNFQEFGEKNNRRS----ALITELKKI 579 +L L+ + V+ + + +++F + + + +IIFVFV HP+DVGDR +++G +V+E++I++T F L+ + I PNS+L T I N RS ++D V ++ F T +++I L+ +I +L+ + P+ V ++ ++ + + + H NFQ+ + RR+ AL+T ++++ Sbjct: 612 FLYLIARNFSGVLTSAGTTLLGLSWLFSGSAQELLSSIIFVFVKHPYDVGDRVDVMINGTVTSAMVKEISIMSTEFRLLTGKVIQAPNSLLNTLWILNMRRSDGIADPVTVNLKFGTTLQQIEQLRIKIIDFLKEEKRDYKPDLLTEVTDLPDLYSMSLCVVFFHKYNFQDEVLRMRRRNMFMCALMTYMQEL 804 The following BLAST results are available for this feature:
BLAST of DR908304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908304 ID=DR908304; Name=DR908304; organism=Citrus sinensis; type=EST; length=669bpback to top |