DR908298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 9.269e-81 Identity = 140/183 (76.50%), Postives = 160/183 (87.43%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPALCNYLESFYTLRK 550 IVCDGCFSNLRRSLCNPKV+VPSCFVGL+LEN +LP N+GHV+LADPSPILFY ISS E+RCLVD+PGQKVP ISNGE+ANYLKTVVAPQ+P+++++SF+AAVD GNI+TMPNRSMPA P+PTPGALL+GDAFNMRHPLTGGGMTVALSDIV+ D+ LC YLESFYTLRK Sbjct: 230 IVCDGCFSNLRRSLCNPKVEVPSCFVGLILENIDLPHINHGHVILADPSPILFYKISSTEIRCLVDVPGQKVPCISNGELANYLKTVVAPQVPKQLYNSFIAAVDKGNIRTMPNRSMPADPHPTPGALLLGDAFNMRHPLTGGGMTVALSDIVLIRDLLRPLRDLHDSSTLCKYLESFYTLRK 412
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.390e-36 Identity = 80/184 (43.48%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVD-GGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPALCNYLESFYTLRK 550 +VCDGC+SNLRRS+ + +V S VG V +NC L ++++ PS + Y ISS +VRC+++I +PSISNGEMA YLK +APQ+P E+ F+ +D G IK MP + M A G +++GDAFNMRHP GM V LSDI+I DA + ++SFY +RK Sbjct: 204 VVCDGCYSNLRRSVNDNNAEVISYQVGYVSKNCQLEDPEKLKLIMSKPSFTMLYQISSTDVRCVMEIFPGNIPSISNGEMAVYLKNTMAPQVPPELRKIFLKGIDEGAQIKAMPTKRMEATLSEKQGVIVLGDAFNMRHPAIASGMMVVLSDILILRRLLQPLRNLSDANKVSEVIKSFYVIRK 387
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 9.083e-36 Identity = 76/184 (41.30%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVD-GGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPALCNYLESFYTLRK 550 +VCDGC+SNLRRSL + +V S VG + +NC L ++++ PS + Y ISS +VRC+ ++ +PSISNGEMA ++K +APQ+P ++ F+ +D G +IK MP + M A G +L+GDAFNMRHP GM V LSDI+I +A + ++SFY +RK Sbjct: 203 VVCDGCYSNLRRSLNDNNAEVLSYQVGFISKNCQLEEPEKLKLIMSKPSFTMLYQISSTDVRCVFEVLPNNIPSISNGEMATFVKNTIAPQVPLKLRKIFLKGIDEGEHIKAMPTKKMTATLSEKKGVILLGDAFNMRHPAIASGMMVLLSDILILRRLLQPLSNLGNAQKISQVIKSFYDIRK 386
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.473e-33 Identity = 70/184 (38.04%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVD-GGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPALCNYLESFYTLRK 550 +VCDGC SNLRRSL + +V + +G + NC L + H+++A PS + Y +SS +VRC ++ + +PS+SNGEM ++++ +APQ+P ++ +F+ +D G +IK + +PA G +++GDAFNMRHP+ GM V LSDI+I D + ++SFY LRK Sbjct: 205 VVCDGCHSNLRRSLNDNNAEVTAYEIGYISRNCRLEQPDKLHLIMAKPSFAMLYQVSSTDVRCNFELLSKNLPSVSNGEMTSFVRNSIAPQVPLKLRKTFLKGLDEGSHIKITQAKRIPATLSRKKGVIVLGDAFNMRHPVIASGMMVLLSDILILSRLLKPLGNLGDENKVSEVMKSFYALRK 388
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.473e-33 Identity = 72/185 (38.92%), Postives = 109/185 (58.92%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPK-VDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVD-GGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPALCNYLESFYTLRK 550 +VCDGC+SNLRRSL + ++ S VG + +NC L H++L+ PS + Y ISS +VRC ++ + PSI+NGEM+ ++K + PQ+P ++ F+ +D G +IK +P + M + G +++GDAFNMRHP+ GM V LSDI+I DA + + SFY +RK Sbjct: 203 VVCDGCYSNLRRSLNDDNNAEIMSYIVGYISKNCRLEEPEKLHLILSKPSFTMVYQISSTDVRCGFEVLPENFPSIANGEMSTFMKNTIVPQVPPKLRKIFLKGIDEGAHIKVVPAKRMTSTLSKKKGVIVLGDAFNMRHPVVASGMMVLLSDILILRRLLQPLSNLGDANKVSEVINSFYDIRK 387
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.510e-33 Identity = 77/202 (38.12%), Postives = 119/202 (58.91%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPR--EIFHSFVAAVDGG--NIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPALCNYLESFYTLRKVTCKISCKSTVSSVF 595 +VCDGC+SNLRRSL + +V S VG V +N L ++ H++ + P + Y I+S+EVRC+ ++P +PSISNGEM+ +LK +APQIP + F+ ++ G IK+ +SM + G +++GDAFNMRHP+ GM VALSDI I + + + ++SFY +RK + +T++S+F Sbjct: 200 VVCDGCYSNLRRSLVDNTEEVLSYMVGYVTKNSRLEDPHSLHLIFSKPLVCVIYQITSDEVRCVAEVPADSIPSISNGEMSTFLKKSMAPQIPETGNLREIFLKGIEEGLPEIKSTATKSMSSRLCDKRGVIVLGDAFNMRHPIIASGMMVALSDICILRNLLKPLPNLSNTKKVSDLVKSFYIIRKPMS--ATVNTLASIF 399
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.343e-30 Identity = 74/185 (40.00%), Postives = 105/185 (56.76%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPALCNYLESFYTLRKVT 556 +V DG FS R+SL + KV V S FVG ++++ N +VL +PSP+L Y ISS+E R LVDI G+ +P + Y+ + PQ+P + SF+ A G ++TMP +P + G L++GDA+N+RHPLTGGGMTVAL DI + D A+ +SF+ RK T Sbjct: 280 VVADGLFSKFRKSLISSKVSVSSHFVGFLMKDAPQFKPNFAELVLVNPSPVLIYQISSSETRVLVDIRGE-LPR----NLREYMAEQIYPQLPEHLKESFLEASQNGRLRTMPASFLPPSSVNKRGVLILGDAYNLRHPLTGGGMTVALKDIKLWRQLLKDIPDLYDDAAIFQAKKSFFWSRKRT 459
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.702e-30 Identity = 73/185 (39.46%), Postives = 104/185 (56.22%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPALCNYLESFYTLRKVT 556 +V DG FS R+SL + KV V S FVG +++N N+ ++LA+PSP+L Y ISS+E R LVDI G+ ++ Y+ + PQIP + F+ A D ++++M +P + G LL+GDA+NMRHPLTGGGMTVA DI + D A+ +SFY RK + Sbjct: 282 VVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYRISSSETRVLVDIRGEMPRNLRE-----YMVEKIYPQIPDHLKEPFLEATDNSHLRSMLASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEANKSFYWARKTS 461
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.270e-29 Identity = 74/183 (40.44%), Postives = 102/183 (55.74%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIXXXXXXXXXXXXDAPALCNYLESFYTLRK 550 +V DG FS R++L + KV V S FVG ++++ N +VL DPSP+L Y IS +E R LVDI G+ +P + Y+ + PQIP + SF+ A ++TMP +P + G LL+GDA+N+RHPLTGGGMTVAL DI I D A+ +SF+ RK Sbjct: 281 VVADGLFSKFRKNLISNKVSVSSHFVGFIMKDAPQFKANFAELVLVDPSPVLIYQISPSETRVLVDIRGE-LPR----NLREYMTEQIYPQIPDHLKESFLEACQNARLRTMPASFLPPSSVNKRGVLLLGDAYNLRHPLTGGGMTVALKDIKIWRQLLKDIPDLYDDAAIFQAKKSFFWSRK 458
BLAST of DR908298 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.129e-28 Identity = 61/151 (40.40%), Postives = 91/151 (60.26%), Query Frame = 2 Query: 2 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENNGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSD 454 IVCDGCFS R++ + + V F+GL+L N + GHV+L+ +P++ YPISS E R L++ PG+ +P + + Y+ P +P ++ S AAV +++MPN+ +P T G +L+GD+ NMRHPLTGGGMTV D Sbjct: 164 IVCDGCFSKFRKAFIDHPIQVTDHFLGLILTNPDYIAPGRGHVILSKVAPMVLYPISSTEARILINYPGKNLPPMET--LKKYVLESCVPNMPEKLRPSLKAAVYNDRLRSMPNQFLPPTVNRTKGMILVGDSNNMRHPLTGGGMTVCFHD 312 The following BLAST results are available for this feature:
BLAST of DR908298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908298 ID=DR908298; Name=DR908298; organism=Citrus sinensis; type=EST; length=671bpback to top |