DR908288

Overview
NameDR908288
Unique NameDR908288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5937 contig Csv1_Contig5937:26..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: S22FL_XENLA (Solute carrier family 22 member 15-like OS=Xenopus laevis GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.607e-24
Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 2
Query:   11 LQTNLYLNVLVNAVAEMPAFTITAVLLDKL--GRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGGW---LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 481
            L+ NLYLNV +  + E+PAF +    ++K   GR+  T G L F+GF C+    V       I   +  + G   V+  +N+++IYT+EL+PTVVRNA LG    A + G IL+PF+  +  +   +PF  F   GI  G+ +  LPET NKP+ +T+  ++
Sbjct:  309 LKGNLYLNVALYGLVEVPAFPLCLYFIEKSWSGRRRATAGFLVFAGFACIFTIFVPETNGDFINPTVLALFGKLSVSAAFNVVYIYTSELYPTVVRNAGLGVCAMACRFGGILSPFIPAMKSFNPSMPFVAFGISGISAGILSLLLPETRNKPIAETIEDLQ 470          
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: S22FL_XENTR (Solute carrier family 22 member 15-like OS=Xenopus tropicalis GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.360e-23
Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 2
Query:   11 LQTNLYLNVLVNAVAEMPAFTITAVLLDKL--GRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVV---LGGWLPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 481
            L+ NLYLNV +  + E+PAF +    ++K   GR+  T G L F+GF C+    +       +   +  + G   V+  +N+++IYT+EL+PTVVRNA LG    A + G IL+PF+     L   +PF  F   GI  G+ +  LPET NKP+ +++  ++
Sbjct:  309 LKGNLYLNVALYGLVEVPAFPLCLYFIEKSWSGRRKATAGFLGFAGFACIFTIFLPETNGDLLNPTVLALFGKLSVSAAFNVVYIYTSELYPTVVRNAGLGVCAMACRFGGILSPFIPTMKSLNPSMPFVAFGISGISAGILSLLLPETRNKPIAESIEDLQ 470          
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: S22AF_XENLA (Solute carrier family 22 member 15 OS=Xenopus laevis GN=slc22a15 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 57/167 (34.13%), Postives = 103/167 (61.68%), Query Frame = 2
Query:    8 NLQTNLYLNVLVNAVAEMPAFTITAVLLD--KLGRKPMTIGTLWFSGFFCLLGSLV---KNNGIWKIVR-MICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGG--W-LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 481
            +L  ++YLN+ ++ +AE+PA+ +   L++  ++GR+    G L+  G  CLL  LV   + +G   ++      ++G   ++ ++N+++IY++EL+PT VRN  +G  +  +++G I+APF+  L    W LPF VF A G+  GL + +LPETLN PL +T+  ++
Sbjct:  320 DLGGDIYLNLALSGLAELPAYPLCMYLINHKRVGRRRSLAGFLFLGGGSCLLIMLVPVKEGSGPLSVLNSQTLSLLGKLNISASFNIVYIYSSELYPTCVRNLGMGVCSMFSRIGGIIAPFIPALRSVHWALPFIVFGAAGVSAGLLSLFLPETLNVPLPETLGDLQ 486          
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: ORCT_DROME (Organic cation transporter protein OS=Drosophila melanogaster GN=Orct PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 55/157 (35.03%), Postives = 91/157 (57.96%), Query Frame = 2
Query:    8 NLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGG-W--LPFAVFAACGIIGGLFAFYLPETLNKPLYDTM 469
            NL  N  +N +++   E+P +T+    L++ GR+ +  GT+  +G   L    V ++  W IV   C ++G   +  +Y  ++I++ E FPTVVRN  LG ++  A++G ILAP++ +LG  W  LP  +  A  +  GL +  LPETLNKP+ +T+
Sbjct:  361 NLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVA--CAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPMPETI 515          
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: S22A6_DANRE (Solute carrier family 22 member 6 OS=Danio rerio GN=slc22a6 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.351e-22
Identity = 52/153 (33.99%), Postives = 93/153 (60.78%), Query Frame = 2
Query:   20 NLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGG---WLPFAVFAACGIIGGLFAFYLPETLNKPLYDTM 469
            ++YL  ++    ++PA  I  + +  LGR+P   G L  +G   L+  LV ++   +++R    V+G   +A ++N  ++Y  EL+PTV+R + +G  +  A+ GA++AP V++LG    W+P  ++    I+ G+FAF+LPETL++PL DT+
Sbjct:  374 SIYLIQIIFGAVDIPAKIIVTICMSMLGRRPSQCGALVLAGIMILINLLVPSD--LQMLRTSLAVIGKGCLAASFNCCYLYAGELYPTVIRQSGMGWVSMMARFGAMVAPMVLLLGDDYPWIPGFIYGGAPIVSGIFAFFLPETLSQPLPDTI 524          
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: S22AF_XENTR (Solute carrier family 22 member 15 OS=Xenopus tropicalis GN=slc22a15 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21
Identity = 57/167 (34.13%), Postives = 100/167 (59.88%), Query Frame = 2
Query:    8 NLQTNLYLNVLVNAVAEMPAFTITAVLLD--KLGRKPMTIGTLWFSGFFCLLGSLVKN---NGIWKIVR-MICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVL--GGW-LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 481
            +L  ++YLN+ ++ +AE+PA+ +   L++  ++GR+    G L   G  CLL  LV     +G   ++      ++G   ++  +N+++IY++EL+PT VRN  +G  +  +++G I+APF+  L    W LPF VF A G+  GL +  LPETL+ PL +T+A ++
Sbjct:  320 DLGGDIYLNLALSGLAELPAYPLCMYLINHKRVGRRGSLAGFLCVGGGACLLIMLVPGKTGSGPLSVLNSQTLSLLGKLNISAAFNIVYIYSSELYPTCVRNLGMGVCSMFSRIGGIIAPFIPALRFAHWALPFIVFGAAGVSAGLLSLLLPETLSAPLPETLADLR 486          
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: S22AF_MOUSE (Solute carrier family 22 member 15 OS=Mus musculus GN=Slc22a15 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21
Identity = 56/167 (33.53%), Postives = 98/167 (58.68%), Query Frame = 2
Query:    8 NLQTNLYLNVLVNAVAEMPAFTITAVLLDK--LGRKPMTIGTLWFSGFFCLLGSLV---KNNGIWKIVRM-ICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGG--W-LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 481
            +L  ++Y N+ ++ + E+P++ +   L+++   GRK      L   G  CL+   +   K+ G++ +V      ++G   ++  +N+++IYT+EL+PTV+RN  LG  +  +++G I+APFV  L    W LPF VF A G+  GL +  LPETLN PL +T + ++
Sbjct:  331 DLGGSIYANLALSGLIEIPSYPLCIYLINQRWFGRKRTLAAFLCLGGLACLIVMFLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGACSMFSRVGGIIAPFVPSLKDVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLETFSDLQ 497          
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: S22AF_HUMAN (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.319e-21
Identity = 55/167 (32.93%), Postives = 98/167 (58.68%), Query Frame = 2
Query:    8 NLQTNLYLNVLVNAVAEMPAFTITAVLLDK--LGRKPMTIGTLWFSGFFCLLGSLV---KNNGIWKIVRM-ICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLG--GW-LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 481
            +L  ++Y N+ ++ + E+P++ +   L+++   GRK      L   G  CL+   +   K+ G++ +V      ++G   ++  +N+++IYT+EL+PTV+RN  LG  +  +++G I+APF+  L    W LPF VF A G+  GL +  LPETLN PL +T + ++
Sbjct:  331 DLGGSIYANLALSGLIEIPSYPLCIYLINQKWFGRKRTLSAFLCLGGLACLIVMFLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLETFSDLQ 497          
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: S22A5_RAT (Solute carrier family 22 member 5 OS=Rattus norvegicus GN=Slc22a5 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.078e-20
Identity = 52/166 (31.33%), Postives = 94/166 (56.63%), Query Frame = 2
Query:    8 NLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGGW---LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMKEGEGV 496
            NL  ++Y+N  + A  E+PA+ +  +LL  L R+      L+  G   L   LV +   +    ++  ++G FG+   Y+++++YT EL+PTVVRN  +G ++ A++LG+IL+P+ V LG +   LP+ +  +  I+  +   + PE+   PL DT+  M   +G+
Sbjct:  367 NLHGDIYVNCFLLAAVEVPAYVLAWLLLQHLPRRYSISAALFLGGSVLLFIQLVPSELFYLSTALV--MVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFPESFGAPLPDTIDQMLRVKGI 530          
BLAST of DR908288 vs. ExPASy Swiss-Prot
Match: S22A5_MOUSE (Solute carrier family 22 member 5 OS=Mus musculus GN=Slc22a5 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.408e-20
Identity = 52/166 (31.33%), Postives = 94/166 (56.63%), Query Frame = 2
Query:    8 NLQTNLYLNVLVNAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGGW---LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMKEGEGV 496
            NL  ++Y+N  + A  E+PA+ +  +LL  L R+      L+  G   L   LV +   +    ++  ++G FG+   Y+++++YT EL+PTVVRN  +G ++ A++LG+IL+P+ V LG +   LP+ +  +  I+  +   + PE+   PL DT+  M   +G+
Sbjct:  367 NLHGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSELFYLSTALV--MVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFPESFGVPLPDTIDQMLRVKGI 530          
The following BLAST results are available for this feature:
BLAST of DR908288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
S22FL_XENLA1.607e-2437.04Solute carrier family 22 member 15-like OS=Xenopus... [more]
S22FL_XENTR1.360e-2335.80Solute carrier family 22 member 15-like OS=Xenopus... [more]
S22AF_XENLA1.504e-2234.13Solute carrier family 22 member 15 OS=Xenopus laev... [more]
ORCT_DROME1.504e-2235.03Organic cation transporter protein OS=Drosophila m... [more]
S22A6_DANRE3.351e-2233.99Solute carrier family 22 member 6 OS=Danio rerio G... [more]
S22AF_XENTR2.172e-2134.13Solute carrier family 22 member 15 OS=Xenopus trop... [more]
S22AF_MOUSE2.172e-2133.53Solute carrier family 22 member 15 OS=Mus musculus... [more]
S22AF_HUMAN6.319e-2132.93Solute carrier family 22 member 15 OS=Homo sapiens... [more]
S22A5_RAT1.078e-2031.33Solute carrier family 22 member 5 OS=Rattus norveg... [more]
S22A5_MOUSE1.408e-2031.33Solute carrier family 22 member 5 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16416 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-34_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908288 ID=DR908288; Name=DR908288; organism=Citrus sinensis; type=EST; length=672bp
CGTCGTCAATCTCCAAACGAACCTTTATCTAAACGTGCTCGTCAATGCAG
TAGCAGAGATGCCAGCATTCACAATCACAGCAGTTTTGTTGGACAAACTC
GGAAGGAAACCGATGACAATAGGCACTCTTTGGTTTAGTGGATTTTTCTG
CTTACTTGGTAGTTTAGTTAAAAACAATGGCATATGGAAAATTGTGAGGA
TGATTTGTGGCGTTATGGGTATCTTTGGGGTGGCTGGTACTTACAATTTG
CTATTTATATACACTACAGAGTTGTTCCCTACAGTAGTGAGAAACGCAGC
CCTCGGGTGTGCAACACAGGCCGCCCAACTGGGGGCGATTTTGGCACCAT
TCGTGGTGGTTTTGGGTGGTTGGTTGCCATTTGCAGTGTTTGCAGCATGT
GGCATTATCGGAGGGCTGTTTGCATTTTACCTACCGGAGACATTAAACAA
GCCGTTGTATGACACAATGGCCGGAATGAAAGAAGGAGAAGGTGTTGTTT
AGACTCTTAACCGCGTTTATCTTCAGGCAAGGGTTGAAGAGAATCATTGT
TGATGAATTCTTTTTCTCTATTTTAATCACCTTCTGCTGTTGAATTTGAA
TTTCACCTAGAATTTACCAGTGAATGGAGGTAAATGAATGTTGAGGGTGT
CAATTCGTATAAAAAAAAAAAA
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