DR908220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.579e-38 Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 3 Query: 3 TINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSVPMAAAA 269 TINASVRKTNRLVTVEEGFPQHGVGAEIC SVIEESF YLDA VERI GADVPMPYA NLER+ VP VEDIVRAAKRAC+RSVP+AAAA Sbjct: 271 TINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDATVERIGGADVPMPYAGNLERLVVPHVEDIVRAAKRACHRSVPLAAAA 359
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 5.079e-37 Identity = 75/82 (91.46%), Postives = 81/82 (98.78%), Query Frame = 3 Query: 3 TINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRS 248 TINASVRKT+RLVTVEEGFPQHGV AEICASV+EESFSYLDAPVERIAGADVPMPYAANLER+A+PQ+EDIVRA+KRACYRS Sbjct: 281 TINASVRKTSRLVTVEEGFPQHGVCAEICASVVEESFSYLDAPVERIAGADVPMPYAANLERLALPQIEDIVRASKRACYRS 362
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22 Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 3 TINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYR 245 T+ SV+KT RLVTVEEG+PQ VG EI V++++F YLDAP+ IAG DVPMPYAANLE++A+P V ++V A K CY+ Sbjct: 380 TVIESVKKTGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILTIAGKDVPMPYAANLEKLALPNVAEVVDAVKAVCYK 460
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 3 Query: 3 TINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRS 248 TI S++KTN+LVTVEEG+ Q G+GAEI A ++E +F YLDAP+ERI GADVPMPYA+NLE A+ Q ++IV AAKR R+ Sbjct: 274 TIVNSLKKTNKLVTVEEGWAQSGIGAEISALMMEHAFDYLDAPIERICGADVPMPYASNLENAAMVQTQNIVNAAKRVTQRN 355
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20 Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 3 Query: 3 TINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSV 251 +I SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+PYA NLE++A+P D++ A K+ CY S+ Sbjct: 244 SIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVCYYSI 326
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20 Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 3 Query: 3 TINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSV 251 TI SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+P+A NLE++A+P D++ A K+ CY SV Sbjct: 244 TIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPFAVNLEKLALPSESDVIEAVKKVCYYSV 326
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20 Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 3 Query: 3 TINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSV 251 TI SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G D+P+PYA NLE +A+P D++ A K+ CY S+ Sbjct: 244 TIIESVKKTNRLVVVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDLPLPYAVNLETLALPSESDVIEAVKKVCYYSI 326
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20 Identity = 43/79 (54.43%), Postives = 61/79 (77.22%), Query Frame = 3 Query: 15 SVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSV 251 SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+PYA NLE++A+P D++ A K+ CY ++ Sbjct: 248 SVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVCYYTI 326
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20 Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 3 Query: 3 TINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 233 TI ASV KTN LVTVE G+PQ GVGAEICA ++E +F++LDAP R+ GADVPMPYA LE ++PQV+DI+ A K+ Sbjct: 278 TIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355
BLAST of DR908220 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20 Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 3 Query: 3 TINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 233 TI ASV KTN LVTVE G+PQ GVGAEICA ++E +F++LDAP R+ GADVPMPYA LE ++PQV+DI+ A K+ Sbjct: 278 TIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355 The following BLAST results are available for this feature:
BLAST of DR908220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908220 ID=DR908220; Name=DR908220; organism=Citrus sinensis; type=EST; length=691bpback to top |