DR908206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 443.351 bits (1139), Expect = 5.568e-124 Identity = 209/231 (90.48%), Postives = 220/231 (95.24%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGI 693 DGQG LWWQ+FH GKLKYTRPYLIE MY+ +IQIS+LTLLNSPSWNVHPVYS NIL+QGITI+APV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA IALGSEMSGGIQDVRAEDI AIN+ESG+RIKT +GRGGYVKDIYVRGMTM TMKWAFWMTGNYGSHADNHYDPKA PVIQGINYRD+VA+NVSMAARLEGI Sbjct: 179 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGI 409
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_RHIRD (Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25 Identity = 71/207 (34.30%), Postives = 103/207 (49.76%), Query Frame = 1 Query: 97 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG--WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKT-AVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVADNVSMAA 678 Q+ T+ N+ SW +HP ++ TIIAP SPNTDG NP+SC N I GDDC+AVK+G + + T+ + +R + P + +GSEMSGG+ DV ED I T+ G+R+KT A GG V +I +R + + ++ A +Y AD H D P + GI D+ N++ AA Sbjct: 34 QLLGFTIRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGITVRH-CLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAA 239
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 67/211 (31.75%), Postives = 113/211 (53.55%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSE-MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY-GSHADNHYDPKALPV 624 +GQG+ WW+ HKG +RP ++F +N+++S LT L+SP ++H + + + + I AP +SPNTDGI+ + +N I+DC I +GDDC+A+ SG T + I + C + +I +LG + + +++V ++ T +G RIKT G GY + I G+T+ ++ + Y G +DN D K+ V Sbjct: 124 NGQGSSWWE--HKG----SRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAV 317
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 69/238 (28.99%), Postives = 112/238 (47.06%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKYT----------RPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMS-GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA 678 DGQG WW G+ K RP I+ Y+ ++ + LTL+NSP +++ + +QG+ I AP SPNTDGI+ + IE C I +GDDC+A+ +G + + I+ L C + +I +LG + S + V K I+T++G+RIKT G G I + M + + Y + A + ++ IQG+ Y++I + + AA Sbjct: 157 DGQGQQWWA----GQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAA 379
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 70/234 (29.91%), Postives = 110/234 (47.01%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKYT------RPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMS-GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA 678 DGQG WW K T RP I+ ++ ++ + LTL NSP +++ + +QGI I AP SPNTDGI+ + IE C I +GDDCVAV +G + + I+ LTC + +I +LG S + V + K I+T++G+RIKT G G I + M + + Y + A + ++ IQ + +++I + + AA Sbjct: 158 DGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG-----------SSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAA 380
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17 Identity = 62/228 (27.19%), Postives = 108/228 (47.37%), Query Frame = 1 Query: 1 DGQGALWWQQF---HKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMSGG-IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVS 669 DG G WWQ +K K P + F + ++ + +L + N+ + SN+ V + + AP SPNTDGI+ + N R+ + I +GDDC++++SG ++ + I +TC + +I +LG + S + V + K T++GVRIKT G G +I + + M +K + +Y + + A+ V + + YRDI + S Sbjct: 169 DGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQV-KNVVYRDISGTSAS 384
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.547e-17 Identity = 69/238 (28.99%), Postives = 111/238 (46.64%), Query Frame = 1 Query: 1 DGQGALWWQQFHKGKLKYT----------RPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMS-GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA 678 DGQG WW G+ K+ RP I+F ++ + I L L+NSP +++ + + GI+I AP SPNTDGI+ + N ++ I +GDDCVA+ +G + +VI L C + +I +LG E S + V K I+T++G+RIKT G G I + M + + Y + A + ++ IQ + Y++I + + AA Sbjct: 157 DGQGKQWWA----GQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG-----------SSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAA 379
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14 Identity = 58/222 (26.13%), Postives = 103/222 (46.40%), Query Frame = 1 Query: 1 DGQGALWWQ---QFHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALGSEMSGG-IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDI 651 +G G WWQ + K K P + N+ + +L + N+ + + + V + I AP SPNTDGI+ + N R+ + I +GDDC++++ G T+ L I LTC + +I +LG + S + + + K +++GVRIKT G G K+I + + M +K + +Y D D ++ ++ + Y++I Sbjct: 169 NGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDG-----------TQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDY-CDKDKCEDQESAVQVKNVVYKNI 378
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14 Identity = 57/232 (24.57%), Postives = 105/232 (45.26%), Query Frame = 1 Query: 1 DGQGALWWQ---QFHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI-ALG-SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDI---VADNVSM 672 +G G +WWQ + +K P + F + ++ + +L + N+ +V N+ + + AP SPNTDGI+ N I C I +GDDC+++ +G ++++ + +TC + +I +LG + DV K T +GVRIKT G G +I + + MH ++ + NY + + ++ + Y++I A NV++ Sbjct: 188 NGNGKIWWQNSCKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNG-----------SRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAI 408
BLAST of DR908206 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 55/233 (23.61%), Postives = 104/233 (44.64%), Query Frame = 1 Query: 1 DGQGALWWQ---QFHKGKLKYTRPYLIEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGG----IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA 678 +G G +WW + +K P + F N+++++L N+ ++ +N++ + I A SPNTDG++ + +I D I +GDDC+++ SG ++ + +TC + I++GS SG + +V + K I E+GVRIKT G G +I + M +K+ + NY + + ++ + Y +I + + A Sbjct: 175 NGNGQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSG-----------SQNVQATNITCGPGHG--ISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSATKVA 394 The following BLAST results are available for this feature:
BLAST of DR908206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908206 ID=DR908206; Name=DR908206; organism=Citrus sinensis; type=EST; length=695bpback to top |