DR908172

Overview
NameDR908172
Unique NameDR908172
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11469 contig Csv1_Contig11469:27..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908172 vs. ExPASy Swiss-Prot
Match: HEBP2_HUMAN (Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 66/168 (39.29%), Postives = 89/168 (52.98%), Query Frame = 1
Query:  193 FEIRHYNSSMWMSTSPIQDISLVQATRTGFLQLFDYIQGKNEYEQTIEMTAPVITEVLPSDGPFCESSFTVSFYVPKVNQANPPP--AKGLHLQQWKPTYAAVRQFSGFVSDSNIGEEAAALQASLAGTEWAAAIEKRHAEDSTSSYIVAQYNSPFEFYNRVNEIWLL 690
            +EIRHY  + W+STS ++ +    A +TGF +L  YIQGKNE E  I+MTAPV + V P  GPF ES+ T+S Y+P   Q +PP      + ++        VR F GF S     E+   L AS+   +     EK         Y  A YNSP +  NR NE+WL+
Sbjct:   38 YEIRHYGPAKWVSTS-VESMDWDSAIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPPRPLESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQLLTL-ASILREDGKVFDEK--------VYYTAGYNSPVKLLNRNNEVWLI 195          
BLAST of DR908172 vs. ExPASy Swiss-Prot
Match: HEBP2_MOUSE (Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21
Identity = 62/168 (36.90%), Postives = 91/168 (54.17%), Query Frame = 1
Query:  193 FEIRHYNSSMWMSTSPIQDISLVQATRTGFLQLFDYIQGKNEYEQTIEMTAPVITEVLPSDGPFCESSFTVSFYVPKVNQANPP-PAKG-LHLQQWKPTYAAVRQFSGFVSDSNIGEEAAALQASLAGTEWAAAIEKRHAEDSTSSYIVAQYNSPFEFYNRVNEIWLL 690
            +EIRHY  + W+ST  ++ +    A +TGF +L  YIQGKNE E  I++TAPV + V P   PF ES+ T+S Y+P   Q +PP P++  + ++        VR F GF S     E+   L A++   E     EK         +  A Y+SPF+  +R NE+WL+
Sbjct:   38 YEIRHYGPAKWVSTC-VESLDWDSAIQTGFTKLNGYIQGKNEKEMKIKLTAPVTSYVEPGSSPFSESTITISLYIPSEQQPDPPRPSESDVFIEDRAEMTVFVRSFDGFSSGQKNQEQLLTL-ANILREEGKVFNEK--------VFYTAGYSSPFQLLDRNNEVWLI 195          
The following BLAST results are available for this feature:
BLAST of DR908172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HEBP2_HUMAN2.552e-2339.29Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE... [more]
HEBP2_MOUSE1.829e-2136.90Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16300 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-39_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908172 ID=DR908172; Name=DR908172; organism=Citrus sinensis; type=EST; length=704bp
AGAAGTCTCTCCACTCAAAAAACAAAAATGGCTGCAGGCTTGAGCATGTT
AAAGTTTTCAGTTCTTCTCGGCCTACTCTCAAATCTGAACTTGGGTTTAT
GGCCTGAATCTTCAAAGGGGTTGAAAATATTTCCACCAACATGCAACAGA
ATTGAGTGTCCAAGCTTTGAGACCGTTCATGTTGGCAATGGCTTTGAAAT
TCGTCACTATAATTCGTCCATGTGGATGTCTACTTCCCCTATTCAAGATA
TCTCTCTAGTTCAAGCTACCAGAACTGGCTTTCTCCAGCTATTTGATTAC
ATTCAAGGAAAGAACGAATATGAGCAAACAATAGAGATGACAGCTCCAGT
AATCACTGAAGTTTTACCAAGTGATGGACCCTTCTGTGAATCTTCATTCA
CCGTTAGCTTTTACGTCCCAAAGGTGAACCAAGCCAACCCACCTCCAGCA
AAAGGCCTCCATCTCCAACAATGGAAACCAACGTACGCGGCTGTGAGACA
GTTCAGCGGGTTTGTATCAGACTCGAACATTGGTGAAGAAGCTGCTGCAT
TGCAAGCCAGCCTTGCAGGCACTGAATGGGCTGCAGCCATTGAGAAAAGA
CATGCAGAAGACTCCACTTCAAGTTACATTGTTGCACAGTATAACTCTCC
CTTTGAATTTTACAACAGAGTGAATGAGATATGGCTTTTGTTTGATTTGG
AAGA
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