DR908143

Overview
NameDR908143
Unique NameDR908143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6321 contig Csv1_Contig6321:1..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LONH2_ARATH (Lon protease homolog 2, mitochondrial OS=Arabidopsis thaliana GN=At5g26860 PE=1 SV=2)

HSP 1 Score: 361.688 bits (927), Expect = 2.212e-99
Identity = 181/236 (76.69%), Postives = 209/236 (88.56%), Query Frame = 2
Query:   20 AETAETVERRDNEEAKTVESLDA--EAART----VERVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTLVEQVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDY 709
            A+  E++E    EE  TV S +   E A+T    +E V++D SNL+DYVGKPVFHAE++Y+QTP+GVVMGLAWT+MGGSTLYIETT+VE+ EGKG L++TGQLGDVMKESAQIAHTVAR I+LEKEP+N FFANSKLHLHVPAGATPKDGPSAGCTMITS+LSLA KKPVR+DLAMTGEVTLTG++LPIGGVKEKTIAARRS++KT+IFP ANRRDFDELA NVKEGL+VHFVDDY
Sbjct:  691 ADVGESIENHTVEE-NTVSSAEEPKEEAQTEKIAIETVMIDESNLADYVGKPVFHAEKLYEQTPVGVVMGLAWTSMGGSTLYIETTVVEEGEGKGGLNITGQLGDVMKESAQIAHTVARKIMLEKEPENQFFANSKLHLHVPAGATPKDGPSAGCTMITSLLSLATKKPVRKDLAMTGEVTLTGRILPIGGVKEKTIAARRSQIKTIIFPEANRRDFDELAENVKEGLNVHFVDDY 925          
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LONH4_ARATH (Putative Lon protease homolog 4, mitochondrial OS=Arabidopsis thaliana GN=LON PE=3 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 3.531e-97
Identity = 173/233 (74.25%), Postives = 199/233 (85.41%), Query Frame = 2
Query:   11 SDDAETAETVERRDNEEAKTVESLDAEAARTVERVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTLVEQVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDY 709
            S +  T  T E    +  ++      E A TVE+ ++D SNLSDYVGKPVF  E+IY+QTP+GVVMGLAWT+MGGSTLYIETT VE+ EGKG LH+TG+LGDVMKESA+IAHTVAR I+LEKEP+N  FANSKLHLHVPAGATPKDGPSAGCTMITS+LSLA+KKPVR+DLAMTGEVTLTG++L IGGVKEKTIAARRS+VK +IFP ANRRDFDELA NVKEGL+VHFVD+Y
Sbjct:  698 SAEGSTVLTDELATGDPTESTTEQSGEVAETVEKYMIDESNLSDYVGKPVFQEEKIYEQTPVGVVMGLAWTSMGGSTLYIETTFVEEGEGKGGLHITGRLGDVMKESAEIAHTVARRIMLEKEPENKLFANSKLHLHVPAGATPKDGPSAGCTMITSLLSLALKKPVRKDLAMTGEVTLTGRILAIGGVKEKTIAARRSQVKVIIFPEANRRDFDELARNVKEGLEVHFVDEY 930          
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LONH2_MAIZE (Lon protease homolog 2, mitochondrial OS=Zea mays GN=LON2 PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 7.866e-97
Identity = 173/222 (77.93%), Postives = 198/222 (89.19%), Query Frame = 2
Query:   47 RDNEEAKTVESLDAEAARTVERVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTLVEQVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDYS 712
            +++  +K  +  D  A + +E+V+VD SNL D+VGKPVF AERIY+ TP+GVVMGLAWTAMGGSTLYIET  VE+ EGKGAL +TGQLGDVMKESAQIAHTV RA+LLEKEPDN FFANSK+HLHVPAG+TPKDGPSAGCTMITSMLSLAM KPV++DLAMTGEVTLTG++LPIGGVKEKTIAARRS +KTLIFP+AN+RDFDELA NVKEGL+VHFVD YS
Sbjct:  727 KEDSTSKGNKGTDGAADKAIEKVVVDSSNLGDFVGKPVFQAERIYEHTPVGVVMGLAWTAMGGSTLYIETKKVEEREGKGALVLTGQLGDVMKESAQIAHTVGRAVLLEKEPDNHFFANSKVHLHVPAGSTPKDGPSAGCTMITSMLSLAMGKPVKKDLAMTGEVTLTGRILPIGGVKEKTIAARRSAIKTLIFPAANKRDFDELASNVKEGLEVHFVDTYS 948          
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LONH3_ARATH (Putative Lon protease homolog 3, mitochondrial OS=Arabidopsis thaliana GN=LON PE=3 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 1.752e-96
Identity = 177/238 (74.37%), Postives = 205/238 (86.13%), Query Frame = 2
Query:    2 VKRSDDAETAETVERR--DNEEAKTVESLDAEAARTVERVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTLVEQVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDY 709
            VKR   A+  + +E    D+ E+KT +S     A+T E+V++D SNL+DYVGKPVF  E+IY+QTP+GVVMGLAWT+MGGSTLYIETT VE+  GKG LH+TGQLGDVMKESAQIAHTVAR I+ EKEP+N FFANSKLHLHVP GATPKDGPSAGCTMITS LSLAMKK VR+DLAMTGEVTLTG++LPIGGVKEKTIAARRS++KT+IFP ANRRDF+ELA N+KEGLDVHFVD+Y
Sbjct:  677 VKRMKVADIMKILESATGDSTESKTKQS--GLVAKTFEKVMIDESNLADYVGKPVFQEEKIYEQTPVGVVMGLAWTSMGGSTLYIETTFVEEGLGKGGLHITGQLGDVMKESAQIAHTVARRIMFEKEPENLFFANSKLHLHVPEGATPKDGPSAGCTMITSFLSLAMKKLVRKDLAMTGEVTLTGRILPIGGVKEKTIAARRSQIKTIIFPEANRRDFEELAENMKEGLDVHFVDEY 912          
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LONM_RAT (Lon protease homolog, mitochondrial OS=Rattus norvegicus GN=Lonp1 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 7.414e-71
Identity = 135/226 (59.73%), Postives = 174/226 (76.99%), Query Frame = 2
Query:   65 KTVESLDAEAARTV-----ERVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTLVE------QVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDY 709
            K VE +  +AA  +     + V V   NL D+VGKPVF  ER+YD TP GVVMGLAWTAMGGSTL++ET+L        + +  G+L VTGQLGDVMKESA+IA+T ARA L+E++P+N F   S +HLHVP GATPKDGPSAGCT++T++LSLA+ +PV ++LAMTGEV+LTGKVLP+GG+KEKTIAA+R+ V  +I P+ NR+DF +LAP + EGL+VHFV+ Y
Sbjct:  704 KQVEKVLRKAAYKIVSGEAQTVHVTPENLQDFVGKPVFTVERMYDVTPPGVVMGLAWTAMGGSTLFVETSLRRPQPSGSKEDKDGSLEVTGQLGDVMKESARIAYTFARAFLMEQDPENDFLVTSHIHLHVPEGATPKDGPSAGCTIVTALLSLALGQPVLQNLAMTGEVSLTGKVLPVGGIKEKTIAAKRAGVTCIILPAENRKDFSDLAPFITEGLEVHFVEHY 929          
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LONM_MOUSE (Lon protease homolog, mitochondrial OS=Mus musculus GN=Lonp1 PE=1 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 3.679e-70
Identity = 133/226 (58.85%), Postives = 174/226 (76.99%), Query Frame = 2
Query:   65 KTVESLDAEAARTV-----ERVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTLVE------QVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDY 709
            K VE +  +AA  +     + V V   NL D+VGKPVF  ER+Y+ TP GVVMGLAWTAMGGSTL++ET+L        + +  G+L VTGQLGDVMKESA+IA+T ARA L+E++P+N F   S +HLHVP GATPKDGPSAGCT++T++LSLA+ +PV ++LAMTGEV+LTGKVLP+GG+KEKTIAA+R+ V  +I P+ NR+D+ +LAP + EGL+VHFV+ Y
Sbjct:  703 KQVEKVLRKAAYKIVSGEAQTVQVTPENLQDFVGKPVFTVERMYEVTPPGVVMGLAWTAMGGSTLFVETSLRRPQPSGSKEDKDGSLEVTGQLGDVMKESARIAYTYARAFLMEQDPENDFLVTSHIHLHVPEGATPKDGPSAGCTIVTALLSLALGQPVLQNLAMTGEVSLTGKVLPVGGIKEKTIAAKRAGVTCIILPAENRKDYSDLAPFITEGLEVHFVEHY 928          
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LONM_HUMAN (Lon protease homolog, mitochondrial OS=Homo sapiens GN=LONP1 PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 4.498e-68
Identity = 126/207 (60.87%), Postives = 163/207 (78.74%), Query Frame = 2
Query:  107 ERVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTLVE------QVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDY 709
            E V V   NL D+VGKPVF  ER+YD TP GVVMGLAWTAMGGSTL++ET+L        + +  G+L VTGQLG+VMKESA+IA+T ARA L++  P N +   S +HLHVP GATPKDGPSAGCT++T++LSLAM +PVR++LAMTGEV+LTGK+LP+GG+KEKTIAA+R+ V  ++ P+ N++DF +LA  + EGL+VHFV+ Y
Sbjct:  733 ESVEVTPENLQDFVGKPVFTVERMYDVTPPGVVMGLAWTAMGGSTLFVETSLRRPQDKDAKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQHAPANDYLVTSHIHLHVPEGATPKDGPSAGCTIVTALLSLAMGRPVRQNLAMTGEVSLTGKILPVGGIKEKTIAAKRAGVTCIVLPAENKKDFYDLAAFITEGLEVHFVEHY 939          
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LONM_BOVIN (Lon protease homolog, mitochondrial OS=Bos taurus GN=LONP1 PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.002e-67
Identity = 126/208 (60.58%), Postives = 164/208 (78.85%), Query Frame = 2
Query:  107 ERVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTL-------VEQVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDY 709
            E V V   NL D+VGKPVF  ER+YD TP GVVMGLAWTAMGGSTL++ET+L        ++ +  G+L VTGQLG+VMKESA+IA+T ARA L++ +  N F   S +HLHVP GATPKDGPSAGCT++T++LSLA+ +PVR++LAMTGEV+LTGKVLP+GG+KEKTIAA+R+ V  ++ P+ N++DF +LA  + EGL+VHFV+ Y
Sbjct:  734 EFVEVTPENLQDFVGKPVFTVERMYDVTPPGVVMGLAWTAMGGSTLFVETSLRRPRDRDSDKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQHDSANKFLVTSHIHLHVPEGATPKDGPSAGCTIVTALLSLALDRPVRQNLAMTGEVSLTGKVLPVGGIKEKTIAAKRAGVTCIVLPAENKKDFYDLAAFITEGLEVHFVEHY 941          
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LON_CHLTR (ATP-dependent protease La OS=Chlamydia trachomatis GN=lon PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.146e-63
Identity = 116/200 (58.00%), Postives = 148/200 (74.00%), Query Frame = 2
Query:  110 RVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTLVEQVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDY 709
            R  +   NL DY+GKPVF ++R Y++TP+GV  GLAWT++GG+TLYIE+  V    GK  +H+TGQ GDVMKES+QIA T   + L    P  PFF  S++H+H+P GATPKDGPSAG TM+TS+LSL +  PV  +L MTGE+TLTG+VL IGG++EK IAARRS++  LIFP  NRRD+DEL   +K+GL VHFV  Y
Sbjct:  609 RFTITPKNLQDYLGKPVFSSDRFYEKTPVGVATGLAWTSLGGATLYIESVQVPSSSGKADMHLTGQAGDVMKESSQIAWTYLHSALERYAPGQPFFEKSQVHIHIPEGATPKDGPSAGITMVTSLLSLLLDVPVLNNLGMTGELTLTGRVLGIGGIREKLIAARRSKLNILIFPEDNRRDYDELPAYLKKGLKVHFVTHY 808          
BLAST of DR908143 vs. ExPASy Swiss-Prot
Match: LON_CHLMU (ATP-dependent protease La OS=Chlamydia muridarum GN=lon PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.146e-63
Identity = 115/200 (57.50%), Postives = 148/200 (74.00%), Query Frame = 2
Query:  110 RVLVDGSNLSDYVGKPVFHAERIYDQTPIGVVMGLAWTAMGGSTLYIETTLVEQVEGKGALHVTGQLGDVMKESAQIAHTVARAILLEKEPDNPFFANSKLHLHVPAGATPKDGPSAGCTMITSMLSLAMKKPVREDLAMTGEVTLTGKVLPIGGVKEKTIAARRSEVKTLIFPSANRRDFDELAPNVKEGLDVHFVDDY 709
            R  +   NL DY+GKP+F ++R Y++TP+GV  GLAWT++GG+TLYIE+  V    GK  +H+TGQ GDVMKES+QIA T   + L    P  PFF  S++H+H+P GATPKDGPSAG TM+TS+LSL +  PV  +L MTGE+TLTG+VL IGG++EK IAARRS++  LIFP  NRRD+DEL   +K+GL VHFV  Y
Sbjct:  609 RFTITPKNLQDYLGKPIFSSDRFYEKTPVGVATGLAWTSLGGATLYIESVQVPSSSGKADMHLTGQAGDVMKESSQIAWTYLHSALERYAPGRPFFEKSQVHIHIPEGATPKDGPSAGITMVTSLLSLLLDVPVLNNLGMTGELTLTGRVLGIGGIREKLIAARRSKLNVLIFPEDNRRDYDELPAYLKKGLKVHFVTHY 808          
The following BLAST results are available for this feature:
BLAST of DR908143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
LONH2_ARATH2.212e-9976.69Lon protease homolog 2, mitochondrial OS=Arabidops... [more]
LONH4_ARATH3.531e-9774.25Putative Lon protease homolog 4, mitochondrial OS=... [more]
LONH2_MAIZE7.866e-9777.93Lon protease homolog 2, mitochondrial OS=Zea mays ... [more]
LONH3_ARATH1.752e-9674.37Putative Lon protease homolog 3, mitochondrial OS=... [more]
LONM_RAT7.414e-7159.73Lon protease homolog, mitochondrial OS=Rattus norv... [more]
LONM_MOUSE3.679e-7058.85Lon protease homolog, mitochondrial OS=Mus musculu... [more]
LONM_HUMAN4.498e-6860.87Lon protease homolog, mitochondrial OS=Homo sapien... [more]
LONM_BOVIN1.002e-6760.58Lon protease homolog, mitochondrial OS=Bos taurus ... [more]
LON_CHLTR1.146e-6358.00ATP-dependent protease La OS=Chlamydia trachomatis... [more]
LON_CHLMU1.146e-6357.50ATP-dependent protease La OS=Chlamydia muridarum G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16271 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908143 ID=DR908143; Name=DR908143; organism=Citrus sinensis; type=EST; length=712bp
GGTTAAGAGATCTGATGATGCTGAAACAGCTGAGACAGTTGAGAGACGGG
ATAATGAAGAAGCCAAGACGGTTGAAAGTCTGGATGCTGAAGCAGCTAGG
ACGGTTGAGAGGGTATTGGTTGACGGATCAAATTTATCTGATTATGTTGG
CAAACCTGTTTTTCATGCTGAGCGAATTTATGATCAAACACCCATTGGAG
TTGTGATGGGTCTGGCTTGGACTGCGATGGGTGGTTCCACTTTGTACATA
GAGACCACTCTGGTTGAACAAGTAGAGGGAAAAGGGGCTCTCCATGTCAC
CGGACAACTTGGAGATGTAATGAAAGAAAGTGCCCAAATTGCTCACACAG
TGGCAAGAGCAATCTTGCTCGAGAAAGAACCTGATAACCCTTTCTTTGCC
AACTCCAAGCTACATCTCCATGTTCCAGCTGGGGCCACTCCAAAGGATGG
ACCGAGTGCAGGTTGCACCATGATCACGTCCATGTTGTCCCTTGCCATGA
AGAAGCCTGTCCGTGAGGATCTAGCAATGACTGGGGAAGTAACACTAACG
GGGAAAGTCCTTCCAATTGGTGGGGTCAAGGAGAAAACAATAGCAGCAAG
GAGGAGTGAAGTGAAGACCCTCATATTCCCTTCAGCCAACAGGAGGGACT
TTGATGAGCTTGCTCCAAATGTGAAAGAAGGCCTAGATGTTCACTTTGTA
GACGACTACAGC
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