DR908133

Overview
NameDR908133
Unique NameDR908133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1280 contig Csv1_Contig1280:613..1326. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1Z_ARATH (Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1)

HSP 1 Score: 435.261 bits (1118), Expect = 1.574e-121
Identity = 217/237 (91.56%), Postives = 228/237 (96.20%), Query Frame = 3
Query:    3 TLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            TLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNVSGLILAGSADFKTELSQS++FDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEK+LIGKYFEEISQDTGKYVFGV+DTLKALE+GAVE LIVWENLDINRY LKN+ TGEIVIKHL +DQE NQSNF DA T+AELEVQEK  LLEWFANEYK+FGC+LE
Sbjct:  154 TLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSELFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYVFGVEDTLKALEMGAVETLIVWENLDINRYELKNNTTGEIVIKHLGKDQENNQSNFHDAETNAELEVQEKMPLLEWFANEYKRFGCTLE 390          
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1Y_ARATH (Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=2 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 1.473e-119
Identity = 211/237 (89.03%), Postives = 227/237 (95.78%), Query Frame = 3
Query:    3 TLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            TLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNVSGLILAGSADFKTELSQS++FDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEK+LIGKYFEEISQDTGKYVFGV+DTLKALE+GA+E LIVWENLDINRY LKNS TGE+V+KH  +DQE++ SNF D+ T+AELEVQEK  LLEWFANEYK+FGC+LE
Sbjct:  153 TLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSELFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYVFGVEDTLKALEMGAIETLIVWENLDINRYELKNSTTGEMVVKHFGKDQESDTSNFHDSETNAELEVQEKMPLLEWFANEYKRFGCTLE 389          
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1X_ARATH (Eukaryotic peptide chain release factor subunit 1-1 OS=Arabidopsis thaliana GN=ERF1-1 PE=2 SV=2)

HSP 1 Score: 417.542 bits (1072), Expect = 3.396e-116
Identity = 207/237 (87.34%), Postives = 223/237 (94.09%), Query Frame = 3
Query:    3 TLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            TLFGTLSGNTREVLHKF+VDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQ++INPATSQPNVSGLILAGSADFKTELSQSDMFDPRL AKILNVVDVSYGGENGFNQAIELSAEIL+NVKFIQEKRLIGKYFEEISQDTGKYVFGV+DTL ALE GA+E LIVWENLDINRYV+KNSATGE VIKHLN++QEAN  NF+ A +   L+V+EK SLLEW ANEY++FGC+LE
Sbjct:  155 TLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLAAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVEDTLNALESGAIETLIVWENLDINRYVMKNSATGETVIKHLNKEQEANTENFKVADSDLALDVEEKLSLLEWLANEYRRFGCALE 391          
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1_POLMI (Eukaryotic peptide chain release factor subunit 1 OS=Polyandrocarpa misakiensis GN=ERF1 PE=2 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 6.435e-99
Identity = 183/236 (77.54%), Postives = 200/236 (84.75%), Query Frame = 3
Query:    6 LFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            LFGTL GNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRK AE A Q FI     +PNV+GL+LAGSADFKTELSQSDMFD RLQ KIL +VDVSYGGENGFNQAIELSAE+LSNVKFIQEK+LIG+YF+EISQDTGKY FGVDDTLKALE+GAVEILIVWENLD  RYVLKN  T E  I  L  DQE ++++F D  T  E+E+ E  SLLEWFAN YK+FG +LE
Sbjct:  157 LFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFIT--NDRPNVTGLVLAGSADFKTELSQSDMFDQRLQVKILKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVDDTLKALEMGAVEILIVWENLDTMRYVLKNHTTDEEKILFLKPDQEKDKTHFTDKDTGVEMEMVESCSLLEWFANNYKKFGSTLE 390          
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1_DROME (Eukaryotic peptide chain release factor subunit 1 OS=Drosophila melanogaster GN=eRF1 PE=1 SV=2)

HSP 1 Score: 348.206 bits (892), Expect = 2.530e-95
Identity = 174/237 (73.42%), Postives = 198/237 (83.54%), Query Frame = 3
Query:    6 LFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATG-EIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            LFGTL GNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRK AE+ATQ FI     +PN++GLILAGSADFKTELSQSDMFDPRLQ+K++ +VDVSYGGENGFNQAIEL+AE L NVKFIQEK+LIG+YF+EISQDTGKY FGV+DTL+ALELG+VE LI WENLDI RYVLKN A      + HL  +QE ++S+F D  +  E+E+ E   LLEW AN YK FG +LE
Sbjct:  157 LFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFIT--NDKPNIAGLILAGSADFKTELSQSDMFDPRLQSKVIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHANSTSTTVLHLTPEQEKDKSHFTDKESGVEMELIESQPLLEWLANNYKMFGATLE 391          
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1_RAT (Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus GN=Etf1 PE=2 SV=3)

HSP 1 Score: 342.428 bits (877), Expect = 1.388e-93
Identity = 175/236 (74.15%), Postives = 198/236 (83.90%), Query Frame = 3
Query:    6 LFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            LFGTL GNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRK AE A Q FI+    + NV+GL+LAGSADFKTELSQSDMFD RLQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL    T E  I +L  +QE ++S+F D  T  E E+ E   LLEWFAN YK+FG +LE
Sbjct:  157 LFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISG--DKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLE 390          
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1_RABIT (Eukaryotic peptide chain release factor subunit 1 OS=Oryctolagus cuniculus GN=ETF1 PE=2 SV=3)

HSP 1 Score: 342.428 bits (877), Expect = 1.388e-93
Identity = 175/236 (74.15%), Postives = 198/236 (83.90%), Query Frame = 3
Query:    6 LFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            LFGTL GNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRK AE A Q FI+    + NV+GL+LAGSADFKTELSQSDMFD RLQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL    T E  I +L  +QE ++S+F D  T  E E+ E   LLEWFAN YK+FG +LE
Sbjct:  157 LFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISG--DKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLE 390          
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1_MOUSE (Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus GN=Etf1 PE=1 SV=4)

HSP 1 Score: 342.428 bits (877), Expect = 1.388e-93
Identity = 175/236 (74.15%), Postives = 198/236 (83.90%), Query Frame = 3
Query:    6 LFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            LFGTL GNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRK AE A Q FI+    + NV+GL+LAGSADFKTELSQSDMFD RLQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL    T E  I +L  +QE ++S+F D  T  E E+ E   LLEWFAN YK+FG +LE
Sbjct:  157 LFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISG--DKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLE 390          
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1_MESAU (Eukaryotic peptide chain release factor subunit 1 OS=Mesocricetus auratus GN=ETF1 PE=1 SV=3)

HSP 1 Score: 342.428 bits (877), Expect = 1.388e-93
Identity = 175/236 (74.15%), Postives = 198/236 (83.90%), Query Frame = 3
Query:    6 LFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            LFGTL GNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRK AE A Q FI+    + NV+GL+LAGSADFKTELSQSDMFD RLQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL    T E  I +L  +QE ++S+F D  T  E E+ E   LLEWFAN YK+FG +LE
Sbjct:  157 LFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISG--DKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLE 390          
BLAST of DR908133 vs. ExPASy Swiss-Prot
Match: ERF1_HUMAN (Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens GN=ETF1 PE=1 SV=3)

HSP 1 Score: 342.428 bits (877), Expect = 1.388e-93
Identity = 175/236 (74.15%), Postives = 198/236 (83.90%), Query Frame = 3
Query:    6 LFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLE 713
            LFGTL GNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRK AE A Q FI+    + NV+GL+LAGSADFKTELSQSDMFD RLQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL    T E  I +L  +QE ++S+F D  T  E E+ E   LLEWFAN YK+FG +LE
Sbjct:  157 LFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISG--DKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLE 390          
The following BLAST results are available for this feature:
BLAST of DR908133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
ERF1Z_ARATH1.574e-12191.56Eukaryotic peptide chain release factor subunit 1-... [more]
ERF1Y_ARATH1.473e-11989.03Eukaryotic peptide chain release factor subunit 1-... [more]
ERF1X_ARATH3.396e-11687.34Eukaryotic peptide chain release factor subunit 1-... [more]
ERF1_POLMI6.435e-9977.54Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_DROME2.530e-9573.42Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_RAT1.388e-9374.15Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_RABIT1.388e-9374.15Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_MOUSE1.388e-9374.15Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_MESAU1.388e-9374.15Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_HUMAN1.388e-9374.15Eukaryotic peptide chain release factor subunit 1 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16261 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-40_B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908133 ID=DR908133; Name=DR908133; organism=Citrus sinensis; type=EST; length=714bp
GCACCCTATTTGGCACATTAAGTGGAAACACAAGAGAGGTGCTTCATAAG
TTTACTGTTGATCTGCCGAAGAAGCATGGAAGAGGAGGGCAGTCAGCTCT
TCGTTTTGCTCGTCTTCGGATGGAGAAACGGCACAACTATGTGAGGAAGA
CAGCAGAGCTTGCTACACAGTTCTTTATCAATCCTGCTACCAGTCAGCCC
AATGTGTCTGGATTAATTCTTGCTGGTTCTGCTGATTTCAAAACTGAGCT
GAGCCAGTCTGATATGTTTGATCCTCGTTTACAAGCCAAGATATTGAATG
TTGTTGATGTTTCTTATGGTGGGGAAAATGGTTTTAACCAAGCAATTGAG
TTGTCTGCAGAAATCTTATCAAATGTGAAGTTCATACAAGAAAAACGTTT
GATTGGAAAATACTTTGAGGAGATTAGTCAGGACACTGGAAAATATGTGT
TTGGTGTTGATGACACTTTGAAGGCTCTGGAATTGGGTGCTGTAGAAATC
CTTATTGTGTGGGAAAATCTGGATATCAATAGATATGTACTGAAAAACAG
TGCTACTGGTGAAATTGTTATAAAGCACTTAAACAGAGACCAAGAGGCCA
ATCAGAGCAACTTCCGCGATGCAGCCACATCTGCTGAGTTGGAGGTTCAG
GAAAAGACATCTTTACTCGAGTGGTTTGCCAATGAGTACAAACAGTTTGG
TTGTTCGCTTGAGT
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