DR908125

Overview
NameDR908125
Unique NameDR908125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METTH (3-dehydroquinate synthase OS=Methanobacterium thermoautotrophicum GN=MTH_580 PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 7.509e-55
Identity = 108/225 (48.00%), Postives = 152/225 (67.56%), Query Frame = 2
Query:   17 RRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAK 691
            R+V + +E+ +    +  +      + +++   DW++IP ENI+A  Q     + A      EA++ LE LE G  G++++  D+  +  +    +  N  S    L  AT+TR++  G GDRVCVD CS+M  GEG+LVGS+++GLFLVHSE LES Y+ASRPFRVNAGPV AYV+VPGG+T YLSEL++G EVI+VD+ GR R+A+VGRVKIE RPL+LVEA+
Sbjct:   93 RQVAAYVEIRSKAHEELARRLGRVVDYLILVGEDWKIIPLENIIADLQEEDVKLIAAVADVDEARVALETLEHGTDGVLIEPADISQIKDIAALLE--NIESETYELKPATITRIEPIGSGDRVCVDTCSIMGIGEGMLVGSYSQGLFLVHSESLESEYVASRPFRVNAGPVQAYVMVPGGRTRYLSELETGDEVIIVDRDGRSRSAIVGRVKIEKRPLMLVEAE 315          
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METST (3-dehydroquinate synthase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=Msp_0090 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.045e-52
Identity = 109/234 (46.58%), Postives = 150/234 (64.10%), Query Frame = 2
Query:   17 RRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAK-TNSGDQTL 715
            + V + +E++   +   +      A+ +++   +W+VIP ENI+AS Q     +        EA++ LE +E G  G++L   D   +  L    +  ++ S    L  ATVT+V+  G+GDRVCVD CS+M  G+G+LVGSFA GLFLVHSE LES Y+ASRPFRVNAGPVHAYV+ P  KT YLSEL++G EV+ ++ KG   T +VGRVKIE RPL+L+EAK  NS  +TL
Sbjct:   78 KEVAAYVEINNKDDELLVSKLGTVADYVILKGKNWKVIPLENIIASLQNRTSKIIVDVPNYEEAKLALETMEHGSDGVLLSSNDGNEIRKLGALIEKVSKES--YDLKAATVTKVESVGIGDRVCVDTCSMMNVGDGMLVGSFASGLFLVHSETLESEYVASRPFRVNAGPVHAYVMTPENKTRYLSELEAGDEVVTLNSKGEANTVIVGRVKIEKRPLLLIEAKYKNSRIRTL 309          
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METJA (3-dehydroquinate synthase OS=Methanocaldococcus jannaschii GN=MJ1249 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.555e-52
Identity = 102/219 (46.58%), Postives = 148/219 (67.58%), Query Frame = 2
Query:   35 IEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAK 691
            IE    +E        G  +NI+++  DW +IP EN++A        + A   +  EA++  E LE+G  G++L  ++++ +  L +  +  N+    L +  ATVT+V+  G GDRVC+D CSLM+ GEG+L+GS++R LFLVHSE +E+ Y+A+RPFRVNAGPVHAY+L PG KT YLSELK+G +V++VD+ G  R A+VGRVKIE RPL+L+EA+
Sbjct:   86 IESKEDEEFASEVARFGFVDNIILEGRDWTIIPLENLIADLFHRDVKIVASVNSVDEAKVAYEILEKGTDGVLLNPKNLEDIKELSKLIEEMNKEKVALDV--ATVTKVEPIGSGDRVCIDTCSLMKIGEGMLIGSYSRALFLVHSETVENPYVATRPFRVNAGPVHAYILCPGNKTKYLSELKAGDKVLIVDKDGNTREAIVGRVKIERRPLVLIEAE 302          
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METM5 (3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1678 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.856e-51
Identity = 98/200 (49.00%), Postives = 139/200 (69.50%), Query Frame = 2
Query:   98 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTN 697
            +V++  DW +IP ENI+A   G    + ++     +A+   E LE+G+ G+VL  ED+  V    +  +  N  S  L L  ATVT+++  G GDRVC+D CS+M  GEG+L+GS++RG+FLVHSE +E+ Y+A+RPFRVNAGPVHAY+L P  KT YLS+LK+G +V+VV++ G  R +++GRVKIE RPL LVEA+ N
Sbjct:  107 VVLEGSDWTIIPLENIIADLFGEEIKIVSVVTNVKDAEAAYEILEKGVDGVVLIPEDINEVKDFSKLIERMNSES--LKLDYATVTKIEPVGSGDRVCIDTCSMMEMGEGMLIGSYSRGMFLVHSETVENPYVATRPFRVNAGPVHAYILCPENKTKYLSDLKAGDKVLVVNKNGETRESIIGRVKIEKRPLFLVEAEYN 304          
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METM6 (3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0943 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.914e-50
Identity = 97/200 (48.50%), Postives = 139/200 (69.50%), Query Frame = 2
Query:   98 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTN 697
            IV++  DW +IP ENI+A   G    + ++  +  +A+   E LE+G+ G+VL   D+  V    +  +  N  S  + L  ATVT+++  G GDRVC+D CS+M  GEG+L+GS++RG+FLVHSE +E+ Y+A+RPFRVNAGPVHAY+L P  KT YLS+LK+G +V+VV++ G  R +++GRVKIE RPL LVEA+ N
Sbjct:  107 IVLEGSDWTIIPLENIIADLFGEEIKIVSVVTSVKDAEAAYEILEKGVDGVVLIPNDINEVKDFSKLIERMNSES--VKLDYATVTKIEPVGSGDRVCIDTCSMMEMGEGMLIGSYSRGMFLVHSETVENPYVATRPFRVNAGPVHAYILCPENKTKYLSDLKAGDKVLVVNKNGETRESIIGRVKIEKRPLFLVEAEYN 304          
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METMP (3-dehydroquinate synthase OS=Methanococcus maripaludis GN=MMP0006 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.569e-50
Identity = 96/200 (48.00%), Postives = 138/200 (69.00%), Query Frame = 2
Query:   98 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTN 697
            +V++  DW +IP ENI+A        + ++     +A+   E LE+G+ G+VL  +D+  V    +  +  N  S  + L  ATVT+++  G GDRVC+D CS+M  GEG+L+GS++RG+FLVHSE +E+ Y+A+RPFRVNAGPVHAY+L P  KT YLS+LK+G +V+VV++ G  R A++GRVKIE RPL LVEA+ N
Sbjct:  107 VVLEGSDWTIIPLENIIADLFSEEIKIVSVVTNVKDAEAAYEILEKGVDGVVLIPKDINEVKDFSKLIERMNSES--VKLDYATVTKIEPVGSGDRVCIDTCSMMEMGEGMLIGSYSRGMFLVHSETVENPYVATRPFRVNAGPVHAYILCPENKTKYLSDLKAGDKVLVVNKNGETREAIIGRVKIEKRPLFLVEAEYN 304          
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METM7 (3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_1003 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.569e-50
Identity = 95/200 (47.50%), Postives = 139/200 (69.50%), Query Frame = 2
Query:   98 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTN 697
            ++++  DW +IP ENI+A   G    + ++     +A+   E LE+G+ G+VL  +D+  V    +  +  N  S  + L  ATVT+++  G GDRVC+D CS+M  GEG+L+GS++RG+FLVHSE +E+ Y+A+RPFRVNAGPVHAY+L P  KT YLS+LK+G +V+VV++ G  R +++GRVKIE RPL LVEA+ N
Sbjct:  107 VILEGSDWTIIPLENIIADLFGEEIKLVSVVTNVKDAEAAYEILEKGVDGVVLIPKDINEVKDFSKLIERMNSES--VKLDYATVTKIEPVGSGDRVCIDTCSMMEMGEGMLIGSYSRGMFLVHSETVENPYVATRPFRVNAGPVHAYILCPENKTKYLSDLKAGDKVLVVNKNGETRESIIGRVKIEKRPLFLVEAEYN 304          
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METS3 (3-dehydroquinate synthase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0055 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.499e-50
Identity = 102/225 (45.33%), Postives = 141/225 (62.67%), Query Frame = 2
Query:   17 RRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAK 691
            + V + +E++     Q        A+ I++   DW VIP ENI+A  Q +   + A       A++ +E LE G  G++ +  D   +  + +     +++     L  ATVT V   G GDRVCVD   +M+PGEG+L+GS+++ LFLVHSE LES Y+ASRPFRVNAGPV AYV+VPG KT YLSEL +G EV++V+ +G  RTA VGR KIE RPLIL+EA+
Sbjct:   87 KTVCAYVEITDKNHEQLAVSLGSVADYIILISTDWTVIPLENIIADLQKADVKIIAAVADEDGAKLAIETLEHGTDGVIFEANDFNQIKKIAQLVVDASKIK--YDLKVATVTNVKPLGSGDRVCVDTTDMMKPGEGMLIGSYSKSLFLVHSESLESEYVASRPFRVNAGPVQAYVMVPGNKTRYLSELVAGDEVLIVNTEGETRTAYVGRSKIERRPLILIEAE 309          
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METBU (3-dehydroquinate synthase OS=Methanococcoides burtonii (strain DSM 6242) GN=Mbur_2000 PE=3 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.116e-49
Identity = 109/228 (47.81%), Postives = 151/228 (66.23%), Query Frame = 2
Query:   23 VGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTN 697
            VG+ + +   +  +       + + ++I   DW+VIP EN++A+ Q S   + A  +   EA++ LE +E G  G++L  +D   +KA +A+ E    R+ + +L  L+   VT+V+  GMGDRVCVD C++M  GEG+LVGS A G+FLVHSE  ES Y+ASRPFRVNAG VHAYV V G +T YLSEL SG EV +V+  G+QRT +VGRVKIE RPL+LVEA+ N
Sbjct:  101 VGAYVVIQNKKYEEFAAEIGKECDFLIIVGTDWKVIPLENLIAALQDSDVKIIAGVRDQDEAKLALETMEHGSEGVLLDSDDPNTIKATVAVAE----RSGIEDL-KLVPGKVTKVEAVGMGDRVCVDTCNMMTKGEGMLVGSQASGMFLVHSESEESPYVASRPFRVNAGAVHAYVKV-GDRTRYLSELSSGDEVTIVNAGGKQRTGIVGRVKIERRPLMLVEAEVN 322          
BLAST of DR908125 vs. ExPASy Swiss-Prot
Match: DHQS_METKA (3-dehydroquinate synthase OS=Methanopyrus kandleri GN=MK1408 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 97/192 (50.52%), Postives = 126/192 (65.62%), Query Frame = 2
Query:  116 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAK 691
            DW++IP EN++A  QG    + A ++   EA+I  E LE G  G++L  E +      K         +    L+   V  V   G GDRVCVD CSLM  GEG+LVGS +RG+FL+HSE LE+ Y+  RPFRVNAGPVHAY+ VPGGKT YL+EL+ G EV++VD +GR R AVVGR+KIE RPL+L+ A+
Sbjct:  149 DWKIIPLENLIAELQGEKTQLIAGARDAEEARIAFETLEVGSDGVLLDAERIDPSEIKKTAEIAERAAAERFELVAVEVKEVKPIGKGDRVCVDTCSLMSEGEGMLVGSTSRGMFLIHSESLENPYVEPRPFRVNAGPVHAYIRVPGGKTKYLAELRPGDEVLIVDTEGRTRAAVVGRLKIERRPLMLIRAE 340          
The following BLAST results are available for this feature:
BLAST of DR908125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
DHQS_METTH7.509e-5548.003-dehydroquinate synthase OS=Methanobacterium ther... [more]
DHQS_METST2.045e-5246.583-dehydroquinate synthase OS=Methanosphaera stadtm... [more]
DHQS_METJA4.555e-5246.583-dehydroquinate synthase OS=Methanocaldococcus ja... [more]
DHQS_METM53.856e-5149.003-dehydroquinate synthase OS=Methanococcus maripal... [more]
DHQS_METM61.914e-5048.503-dehydroquinate synthase OS=Methanococcus maripal... [more]
DHQS_METMP5.569e-5048.003-dehydroquinate synthase OS=Methanococcus maripal... [more]
DHQS_METM75.569e-5047.503-dehydroquinate synthase OS=Methanococcus maripal... [more]
DHQS_METS39.499e-5045.333-dehydroquinate synthase OS=Methanobrevibacter sm... [more]
DHQS_METBU2.116e-4947.813-dehydroquinate synthase OS=Methanococcoides burt... [more]
DHQS_METKA1.050e-4850.523-dehydroquinate synthase OS=Methanopyrus kandleri... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16253 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-23_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908125 ID=DR908125; Name=DR908125; organism=Citrus sinensis; type=EST; length=716bp
TTATGATAGTGGAGACAGAAGGGTTGGCTCCATTATTGAGGTTTCAACTC
CACAAGAGTTACAGCAGCTTCAACCGGCAGATGGGCAAGCCGAAAATATT
GTCATTGATTTGCCGGACTGGCAGGTTATACCTGCTGAAAATATTGTTGC
ATCATTTCAAGGCAGTGGCAAAACAGTGTTTGCCATCTCAAAGACTCCTT
CTGAAGCACAAATTTTTCTTGAGGCCTTGGAGCAAGGTCTGGGTGGAATC
GTTCTGAAAGTTGAGGATGTTAAAGCTGTTCTTGCGCTCAAGGAATATTT
TGATGGAAGAAATGAAGTAAGCAATCTCCTTAGCTTGATGAAAGCCACTG
TAACTCGAGTTGATGTAGCTGGAATGGGTGACCGAGTTTGTGTGGACCTT
TGTAGCCTTATGAGACCTGGTGAAGGACTCCTAGTTGGATCCTTTGCTAG
AGGACTATTCCTCGTTCATTCAGAATGCTTGGAGTCAAATTACATTGCCA
GCAGGCCTTTTCGAGTTAATGCGGGGCCAGTGCATGCCTATGTACTTGTC
CCAGGAGGAAAGACTTGCTATCTTTCAGAGTTGAAATCAGGCAAAGAGGT
GATTGTGGTTGATCAAAAAGGGCGGCAGCGAACGGCAGTAGTTGGCCGTG
TGAAGATAGAGTCTAGACCTCTTATACTTGTAGAGGCAAAGACTAATTCA
GGTGATCAAACTCTTT
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