DR908124

Overview
NameDR908124
Unique NameDR908124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13481 contig Csv1_Contig13481:657..1373. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR908124 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.986e-80
Identity = 139/153 (90.85%), Postives = 147/153 (96.08%), Query Frame = 1 
Query:   82 KTAADKRFKTLPPSEALPRHETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEAISLLDIFEE 540
            K   +KRFKTLPP+E+LPR+ET+GGYIFVCNNDTM ENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHG+FEAASFGGTNIDPTAWEDKK  GESRFPAQVRV+TRKICEPLEEDSFRPILHHYDGPKFRLELN+PEAISLLDIFEE
Sbjct:   52 KNGVEKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204
The following BLAST results are available for this feature:
BLAST of DR908124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA3.986e-8090.85B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16252 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908124 ID=DR908124; Name=DR908124; organism=Citrus sinensis; type=EST; length=717bp
GGAAGCAAGAGTGGCAAGAAGAACAGCAACAAGAAGAACAATAACAAAGA
TGGTGACAATAATTCCGATAATAAGGACACTAAGACTGCTGCTGATAAGA
GGTTCAAGACTCTCCCACCCTCGGAGGCTTTGCCGAGACACGAAACCATT
GGTGGCTATATTTTTGTCTGTAACAATGATACCATGGCTGAGAATCTCAA
AAGACAGCTCTTTGGATTGCCACCACGTTACAGGGATTCGGTGAGAGCTA
TAACCCCTGGCTTGCCCCTTTTCCTTTATAACTATTCCACCCACCAGCTG
CATGGAATTTTTGAGGCTGCTAGCTTTGGAGGCACAAATATTGATCCTAC
AGCCTGGGAAGACAAGAAATGCCCTGGCGAATCACGATTCCCAGCTCAGG
TCCGGGTTGTTACACGGAAAATCTGTGAACCGCTTGAAGAGGATTCCTTC
AGGCCAATTCTCCATCACTATGATGGCCCCAAGTTCCGCCTTGAACTAAA
TGTGCCTGAGGCAATTTCTCTCTTGGACATATTTGAAGAACAAGACTCTT
GAGCAATTGCTGCAATACAACCATATGAAACAAAAGCTTACAGATACAAG
TACCAGTTAGTGAAGTTACACAGCATAAAAGTGGTTTGATGATACAAATA
GGGAAAGAATTTAAGAGTTTGTGGCCTTCATTATATTGATAGTTTAGAGA
GAGTATGTGAGGGGAAG
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