DR908121

Overview
NameDR908121
Unique NameDR908121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4902 contig Csv1_Contig4902:280..994. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.682e-62
Identity = 113/190 (59.47%), Postives = 144/190 (75.79%), Query Frame = 1
Query:    1 IIVDYAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 570
            ++++Y+K+  +L   LFEL+SEALGLN N LKDMDC   L LLGHYYP CP+P+LT+G   H+D+SFLT+LLQD +GGLQVLH+  WV+V P+ GALVVN+GD++QLI+NDKF SV HRVLA   GPR+SVACFF S+  +   R YGPI E+LSEENPP Y++ T+ EY     S G DGTS L + K+
Sbjct:  177 MMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMA-NPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365          
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 4.144e-61
Identity = 112/193 (58.03%), Postives = 147/193 (76.17%), Query Frame = 1
Query:    1 IIVDYAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKA---RRYGPINELLSEENPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 570
            I++ Y+     L L LFEL+SEALGL  N L++MDCAEGL LLGHYYP CP+PELT GT  H+DS FLT+L+QD++GGLQ+L EN+W++V  I GALV+N+ D++QLI+NDKFKSV HRVLA  VGPR+SVA  F    Q+++    R YGPI EL+SEENPPIYKE+TVK++++  ++   D +S L  F+L
Sbjct:  207 ILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRFDDSSSLSPFRL 399          
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.087e-57
Identity = 107/191 (56.02%), Postives = 142/191 (74.35%), Query Frame = 1
Query:    1 IIVDYAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLA-KDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 570
            I+++Y+K+   L   LFEL+SEALGL  N L DMDC++GL +L HYYP CPEP+LT+GT  H+D+SFLTVLL D++ GLQV  E  W +V  + GAL++N+GD++QLI+NDKF S+ HRVLA +    RVSVACFF +  +    R YGPI EL+SEENPP Y+E T+K+Y ++  + GLDGTS L HFK+
Sbjct:  180 IMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVR-PNPRMYGPIRELVSEENPPKYRETTIKDYATYFNAKGLDGTSALLHFKI 369          
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.906e-54
Identity = 105/191 (54.97%), Postives = 140/191 (73.30%), Query Frame = 1
Query:    4 IVDYAKKTTELALTLFELISEALGLNANRLKD-MDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFF-RSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 570
            ++D++K   +L  TL EL+SE LGL+ + LKD MDC   LF   +YYP CP+PELTMGT  H D  F+T+LLQD +GGLQVLH+N WV+V P  G+LVVN+GD +QL+SNDK+ SV HR ++ +VG R+S+ CFF  S +QS K   YGPI ELLSE+NPP Y+  TVK++ S+ ++ GLDGTS L  +K+
Sbjct:  176 LIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFH-LFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKL--YGPITELLSEDNPPKYRATTVKDHTSYLHNRGLDGTSALSRYKI 363          
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.428e-53
Identity = 104/191 (54.45%), Postives = 138/191 (72.25%), Query Frame = 1
Query:    1 IIVDYAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLA-KDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 570
            ++++Y+K+   L   LFEL+SEALGLN N LKDM+C +GL +L HY+P CPEP+LT GT  H+D SFLTVLL D + GLQV  E  W +V  + GAL++N+GD++QLI+NDKF S+ HRVLA +    RVSVACFF +H +    R YGPI EL+SEENPP Y+E T+++Y ++    GL GTS L  FK+
Sbjct:  180 VMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVK-PNPRVYGPIKELVSEENPPKYRETTIRDYATYFNGKGLGGTSALLDFKV 369          
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.251e-49
Identity = 99/191 (51.83%), Postives = 133/191 (69.63%), Query Frame = 1
Query:    1 IIVDYAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAK-DVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 570
            I+++Y+K+  +LA  +FE++SEALGL+ N LK+MDCA+GL++L H +P CPEP  T G   H D SFLT+LL D  GGLQVL++  W++V P   AL+ N+GD +QLISNDKF S+ HR+LA     PR+SVACFF   F S  +R YGPI ELLSE NPP Y++ T  E  +H  +   +G S LDH ++
Sbjct:  170 IMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSRVYGPIKELLSELNPPKYRD-TTSESSNHYVARKPNGNSSLDHLRI 359          
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.051e-24
Identity = 62/172 (36.05%), Postives = 100/172 (58.14%), Query Frame = 1
Query:   10 DYAKKTTELALTLFELISEALGLNANRLKDMDCAEG---LFLLG-HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 513
            +Y K+  E+   +F+ +S  LGL  + +  ++ A G   ++LL  +YYP CP P+L +G  +H D S++T+L+ + + GLQV  +  W +V  I  AL+V++GD ++++SN K+KSV HR        R+S   F     + E     GPI +LLSE NPP +K    K+Y+
Sbjct:  174 EYGKRMREVVDRIFKSLSLGLGLEGHEM--IEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVPNEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHE----VGPIPKLLSEANPPKFKTKKYKDYV 339          
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 53/130 (40.77%), Postives = 80/130 (61.54%), Query Frame = 1
Query:   13 YAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 402
            Y ++  EL+LT+ EL+  +LG+     ++        +  +YYP CPEPE T+GT  H D + LT+LLQD +GGL+VL + EW  V+P+ GA+V+N+GD    +SN ++KS  HR +      R S+A F
Sbjct:  192 YCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFF 321          
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 53/130 (40.77%), Postives = 80/130 (61.54%), Query Frame = 1
Query:   13 YAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 402
            Y ++  EL+LT+ EL+  +LG+     ++        +  +YYP CPEPE T+GT  H D + LT+LLQD +GGL+VL + EW  V+P+ GA+V+N+GD    +SN ++KS  HR +      R S+A F
Sbjct:  192 YCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFF 321          
BLAST of DR908121 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24
Identity = 65/178 (36.52%), Postives = 98/178 (55.06%), Query Frame = 1
Query:    1 IIVDYAKKTTELALTLFELISEALGLN------ANRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHEN-EWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 513
            I+ +Y +   +LA  L  L   +LG++      A+   D++ A+    L HY P CPEP+  MG  +H DS+ LT+L Q+   GLQV  ++  WV V P  G+LVVN+GD+  ++SN  FKSV HR        R+SVA      +  +   +  P+ +L+S    P+Y+ +T KEYL
Sbjct:  166 IVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHY-PVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVNQTRARLSVAFL----WGPQSDIKISPVPKLVSPVESPLYQSVTWKEYL 338          
The following BLAST results are available for this feature:
BLAST of DR908121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCH1_ARATH1.682e-6259.471-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO4.144e-6158.03Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_ARATH8.087e-5756.021-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH3_SOLLC4.906e-5454.971-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH1.428e-5354.451-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH1.251e-4951.83Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
FLS_PETHY4.051e-2436.05Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
GAOX2_ORYSJ5.291e-2440.77Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI5.291e-2440.77Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
G3OX1_ARATH9.025e-2436.52Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16249 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-33_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908121 ID=DR908121; Name=DR908121; organism=Citrus sinensis; type=EST; length=718bp
ATAATCGTTGACTACGCTAAAAAGACAACAGAATTAGCACTCACTCTATT
TGAACTTATTTCGGAAGCTCTTGGCCTTAACGCCAATCGCCTGAAAGACA
TGGATTGCGCAGAGGGACTGTTCTTGTTAGGCCATTACTACCCAACATGC
CCTGAACCAGAGTTGACTATGGGAACTGACAGCCATGCTGATAGTAGCTT
CCTTACTGTGCTCCTACAAGACAGACTTGGTGGCCTCCAAGTCCTCCATG
AAAATGAATGGGTCAATGTTACACCCATTTATGGAGCTCTAGTGGTAAAT
CTCGGAGACATGATGCAGCTGATTTCCAATGACAAGTTTAAGAGCGTGAA
TCACAGAGTTCTTGCTAAAGATGTTGGTCCACGAGTGTCTGTGGCATGTT
TCTTCAGATCACATTTTCAATCAGAGAAAGCAAGGCGTTATGGGCCAATC
AACGAGTTACTCTCAGAAGAGAACCCGCCAATATACAAGGAAATCACTGT
GAAAGAGTACCTGTCACACAGTTACTCAATAGGGCTTGACGGTACCTCTC
CACTCGACCATTTTAAACTGTGAAGTATTCGACGTGCCTGCATAATTCCA
GTTAATAACTTTTGCTTGAGATTTGAAATTGAATGATTGGTTGAAATGCA
TAAGAAGTTTTAGAATAATCCTGCTCAATATATAGGCTTGAAGGCAAGTC
GGCACTTAGTGCTTGAGC
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