DR406011

Overview
NameDR406011
Unique NameDR406011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length387
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.499e-19
Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF+SEAILREH+PE    TLALACGPPPMIQFAV PNLEKM YD KDSLLVF
Sbjct:  851 SLGFISEAILREHIPEPSHTTLALACGPPPMIQFAVNPNLEKMGYDIKDSLLVF 904          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.794e-19
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E ILREH+P    DTLALACGPP MIQFAVQPNLEKMNYDTK+SLLVF
Sbjct:  865 SVGFITENILREHIPAAAEDTLALACGPPAMIQFAVQPNLEKMNYDTKNSLLVF 918          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.671e-18
Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++EAILREH+PE    TLALACGPPPMIQFAV PNLEKM YD KDSLLVF
Sbjct:  851 SIGFITEAILREHIPEPSHTTLALACGPPPMIQFAVNPNLEKMGYDIKDSLLVF 904          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.722e-18
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF++EA+LREH+P     TLALACGPPPMIQFAV PNLEKM YD KDSLLVF
Sbjct:  856 STGFITEAVLREHIPLPSQTTLALACGPPPMIQFAVNPNLEKMGYDIKDSLLVF 909          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA1_MAIZE (Nitrate reductase [NADH] (Fragment) OS=Zea mays PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.861e-18
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++EA+LREHVPEG  DTLALACGPPPMIQFA+ PNLEKM YD  +S +VF
Sbjct:  568 SVGFVTEAVLREHVPEGGDDTLALACGPPPMIQFAISPNLEKMKYDMANSFVVF 621          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA1_BRANA (Nitrate reductase [NADH], clone PBNBR1405 OS=Brassica napus GN=NIA1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.291e-18
Identity = 41/55 (74.55%), Postives = 49/55 (89.09%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXX-DTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF++EA+LREHVPEG   ++LALACGPPPMIQFA+QPNLEKM YD K+ LL+F
Sbjct:  857 STGFITEAVLREHVPEGLEGESLALACGPPPMIQFALQPNLEKMGYDIKEDLLIF 911          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.083e-17
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF++E+ILREH+PE    TLALACGPPPMIQFA+ PNLEKM YD K+ LLVF
Sbjct:  858 STGFVTESILREHIPEPSHTTLALACGPPPMIQFAINPNLEKMGYDIKEELLVF 911          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.083e-17
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E I+REHVPE   DTLALACGPPPMIQFA+ PNLEKM YD K+SLLVF
Sbjct:  867 SEGFITEDIMREHVPEVSEDTLALACGPPPMIQFAINPNLEKMGYDIKNSLLVF 920          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 3.151e-17
Identity = 39/55 (70.91%), Postives = 49/55 (89.09%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXX-DTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF++EA+LREH+PEG   ++LALACGPPPMIQFA+QPNLEKM Y+ K+ LL+F
Sbjct:  863 STGFITEAVLREHIPEGLEGESLALACGPPPMIQFALQPNLEKMGYNVKEDLLIF 917          
BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.115e-17
Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E+IL EH+P    DTLAL CGPPPMIQFAVQPNLEK+ YDT+++LLVF
Sbjct:  837 SVGFITESILTEHIPNASPDTLALTCGPPPMIQFAVQPNLEKLGYDTQNNLLVF 890          
The following BLAST results are available for this feature:
BLAST of DR406011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NIA1_TOBAC7.499e-1981.48Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA_CUCMA9.794e-1979.63Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
NIA2_TOBAC1.671e-1879.63Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]
NIA_PETHY3.722e-1877.78Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA1_MAIZE4.861e-1874.07Nitrate reductase [NADH] (Fragment) OS=Zea mays PE... [more]
NIA1_BRANA8.291e-1874.55Nitrate reductase [NADH], clone PBNBR1405 OS=Brass... [more]
NIA_SOLLC1.083e-1774.07Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
NIA_CICIN1.083e-1775.93Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
NIA1_ARATH3.151e-1770.91Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NIA2_SOYBN4.115e-1770.37Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248H07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406011 ID=DR406011; Name=DR406011; organism=Citrus sinensis; type=EST; length=387bp
GGGACAGTACGGGATTCCTTTCAGAAGCAATCCTCAGGGAGCACGTCCCA
GAAGGNNNNNNNGATACTCTTGCATTGGCGTGTGGGCCTCCTCCGATGAT
TCAATTTGCCGTGCAGCCGAATTTGGAGAAAATGAACTACGATACCAAGG
ATTCGTTGCTGGTGTTTTAAATTAAACGCTGGGGGCAAGCACAGACGACG
ATACCAGCCGAGGTTGTACATATTTAAACGTCGAAGTTTTCAGCAGCAGT
TAAGTACTGCGTCACTCTATAGAGTCTATAAATAAATTCTCCCCGATCAA
TAACAAAAAAAAAAAAAATAAAAAATTAAAAATAAAAAAAAAAAAAAAAA
AAAAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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