DR405922

Overview
NameDR405922
Unique NameDR405922
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length387
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.974e-19
Identity = 45/54 (83.33%), Postives = 47/54 (87.04%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGSXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF+SEAILREH+PE S  TLALACGPPPMIQFAV PNLEKM YD KDSLLVF
Sbjct:  851 SLGFISEAILREHIPEPSHTTLALACGPPPMIQFAVNPNLEKMGYDIKDSLLVF 904          
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.397e-19
Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGSXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++EAILREH+PE S  TLALACGPPPMIQFAV PNLEKM YD KDSLLVF
Sbjct:  851 SIGFITEAILREHIPEPSHTTLALACGPPPMIQFAVNPNLEKMGYDIKDSLLVF 904          
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.794e-19
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGSXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF++EA+LREH+P  S  TLALACGPPPMIQFAV PNLEKM YD KDSLLVF
Sbjct:  856 STGFITEAVLREHIPLPSQTTLALACGPPPMIQFAVNPNLEKMGYDIKDSLLVF 909          
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGSXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF++E+ILREH+PE S  TLALACGPPPMIQFA+ PNLEKM YD K+ LLVF
Sbjct:  858 STGFVTESILREHIPEPSHTTLALACGPPPMIQFAINPNLEKMGYDIKEELLVF 911          
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.722e-18
Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGSXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E ILREH+P  +  TLALACGPP MIQFAVQPNLEKMNYDTK+SLLVF
Sbjct:  865 SVGFITENILREHIPAAAEDTLALACGPPAMIQFAVQPNLEKMNYDTKNSLLVF 918          
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA1_BRANA (Nitrate reductase [NADH], clone PBNBR1405 OS=Brassica napus GN=NIA1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.414e-17
Identity = 41/55 (74.55%), Postives = 48/55 (87.27%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEG-SXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF++EA+LREHVPEG    +LALACGPPPMIQFA+QPNLEKM YD K+ LL+F
Sbjct:  857 STGFITEAVLREHVPEGLEGESLALACGPPPMIQFALQPNLEKMGYDIKEDLLIF 911          
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.847e-17
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGSXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E I+REHVPE S  TLALACGPPPMIQFA+ PNLEKM YD K+SLLVF
Sbjct:  867 SEGFITEDIMREHVPEVSEDTLALACGPPPMIQFAINPNLEKMGYDIKNSLLVF 920          
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA1_MAIZE (Nitrate reductase [NADH] (Fragment) OS=Zea mays PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.412e-17
Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGSXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++EA+LREHVPEG   TLALACGPPPMIQFA+ PNLEKM YD  +S +VF
Sbjct:  568 SVGFVTEAVLREHVPEGGDDTLALACGPPPMIQFAISPNLEKMKYDMANSFVVF 621          
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 5.374e-17
Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEG-SXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            STGF++EA+LREH+PEG    +LALACGPPPMIQFA+QPNLEKM Y+ K+ LL+F
Sbjct:  863 STGFITEAVLREHIPEGLEGESLALACGPPPMIQFALQPNLEKMGYNVKEDLLIF 917          
BLAST of DR405922 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.019e-17
Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    6 STGFLSEAILREHVPEGSXXTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S GF++E+IL EH+P  S  TLAL CGPPPMIQFAVQPNLEK+ YDT+++LLVF
Sbjct:  837 SVGFITESILTEHIPNASPDTLALTCGPPPMIQFAVQPNLEKLGYDTQNNLLVF 890          
The following BLAST results are available for this feature:
BLAST of DR405922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NIA1_TOBAC1.974e-1983.33Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA2_TOBAC4.397e-1981.48Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]
NIA_PETHY9.794e-1979.63Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA_SOLLC2.850e-1875.93Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
NIA_CUCMA3.722e-1877.78Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
NIA1_BRANA1.414e-1774.55Nitrate reductase [NADH], clone PBNBR1405 OS=Brass... [more]
NIA_CICIN1.847e-1775.93Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
NIA1_MAIZE2.412e-1772.22Nitrate reductase [NADH] (Fragment) OS=Zea mays PE... [more]
NIA1_ARATH5.374e-1770.91Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NIA2_SOYBN7.019e-1770.37Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248D05 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405922 ID=DR405922; Name=DR405922; organism=Citrus sinensis; type=EST; length=387bp
GGGACAGTACGGGATTCCTTTCAGAAGCAATCCTCAGGGAGCACGTCCCA
GAAGGATCNNNNNNTACTCTTGCATTGGCGTGTGGGCCTCCTCCGATGAT
TCAATTTGCCGTGCAGCCGAATTTGGAGAAAATGAACTACGATACCAAGG
ATTCGTTGCTGGTGTTTTAAATTAAACGCTGGGGGCAAGCACAGACGACG
ATACCAGCCGAGGTTGTACATATTTAAACGTCGAAGTTTTCAGCAGCAGT
TAAGTACTGCGTCACTCTATAGAGTCTATAAATAAATTCTCCCCGATCAA
TAACAAAAAAAAAAAAAATAAAAAATTAAAAATAAAAAAAAAAAAAAAAA
AAAAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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