EY720374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY720374 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 4.894e-65 Identity = 122/148 (82.43%), Postives = 132/148 (89.19%), Query Frame = 1 Query: 7 TRPQNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMK-ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 447 T + G+ETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMK ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD G GEKRTLEVDAVIGADGANSRVAK Sbjct: 70 TLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTAYDSKTNGAGEKRTLEVDAVIGADGANSRVAK 217
BLAST of EY720374 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 8.347e-65 Identity = 119/148 (80.41%), Postives = 133/148 (89.86%), Query Frame = 1 Query: 7 TRPQNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMK-ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 447 T Q G+ET LIERK+DNCKPCGGAIPLCMVGEF+LPLDIIDR+VTKMK ISPSN+AVDIG+TLK HEYIGMVRREVLDAYLRERAEK+GA+VINGLF+KMD P N++ PY L+YTEYDG G G K+T+EVDAVIGADGANSRVAK Sbjct: 73 TLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMKMISPSNIAVDIGRTLKEHEYIGMVRREVLDAYLRERAEKSGATVINGLFLKMDHPENWDSPYTLHYTEYDGKTGATGTKKTMEVDAVIGADGANSRVAK 220
BLAST of EY720374 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 2.061e-55 Identity = 107/146 (73.29%), Postives = 120/146 (82.19%), Query Frame = 1 Query: 16 QNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMK-ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAK 447 + GVET LIERKLDNCKPCGGAIPLCMV EFDLPLD++DRKV KMK ISPSNVAVDIG TL PHEYIGMVRREVLDAYLR RAE GA V+NGLF++ + P+ YV++Y YD + G GEKRT EVDA++GADGANSRVAK Sbjct: 71 KGGVETVLIERKLDNCKPCGGAIPLCMVSEFDLPLDLVDRKVRKMKMISPSNVAVDIGGTLAPHEYIGMVRREVLDAYLRSRAEGAGAEVVNGLFLRYEAPKEPNGSYVVHYNHYDSSNGKAGGEKRTFEVDAIVGADGANSRVAK 216
BLAST of EY720374 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.582e-47 Identity = 95/143 (66.43%), Postives = 110/143 (76.92%), Query Frame = 1 Query: 22 GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMK-ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 447 G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR+V KMK ISPSN+ V+IGQTLK EYIGM RREVLD +LRERAEK G VING K+D+P PY L+Y ++ G GE + L+VD VIGADGANSR+AK Sbjct: 25 GIETYLFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDRRVRKMKMISPSNIEVNIGQTLKDDEYIGMCRREVLDGFLRERAEKLGTKVINGTVYKLDIPSKDSDPYTLHYADH-SVGGTTGEMKILKVDVVIGADGANSRIAK 166
BLAST of EY720374 vs. ExPASy Swiss-Prot
Match: BCHP_RHOCA (Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus GN=bchP PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.932e-14 Identity = 54/143 (37.76%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 22 GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMK-ISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRV 441 G++ L++R KPCGGAIP ++ +FD+P ++ K+T + ISP+ VDI P E ++GMV RE D +LRERA K GA + G +++++ R+ + V++ + GE+ E VIGADGANS+V Sbjct: 25 GLKVALLDRA-GRIKPCGGAIPPRLIRDFDIPDHLLVAKITSARMISPTGRFVDI-----PIENGFVGMVDREDYDEWLRERAGKAGAERLTGTWLRIE--RDSGKTVVVWRDKV------TGEEMKAETRVVIGADGANSQV 153 The following BLAST results are available for this feature:
BLAST of EY720374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720374 ID=EY720374; Name=EY720374; organism=Citrus sinensis; type=EST; length=448bpback to top |