EY720365

Overview
NameEY720365
Unique NameEY720365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length340
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11183 contig Csv1_Contig11183:1..340. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY720365 vs. ExPASy Swiss-Prot
Match: CATB_PSEPU (Muconate cycloisomerase 1 OS=Pseudomonas putida GN=catB PE=1 SV=4)

HSP 1 Score: 144.05 bits (362), Expect = 2.147e-34
Identity = 76/113 (67.26%), Postives = 85/113 (75.22%), Query Frame = 2
Query:    5 LPTIRP-HKLAMHTMQNQTLVVIRVRCADXXXXXXXXXXXXXLSYGNESPDSIKVNIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDALGKRLNLPVSEL 340
            LPTIRP HKLAMHTMQ QTLV+IRVRC+D             L+YG ESP+ IK NID H AP L+G  A NINAAML+L++  +GNTFAKSGIESALLDA GKRL LPVSEL
Sbjct:   17 LPTIRPPHKLAMHTMQTQTLVLIRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALVGLPADNINAAMLKLDKLAKGNTFAKSGIESALLDAQGKRLGLPVSEL 129          
BLAST of EY720365 vs. ExPASy Swiss-Prot
Match: CATB2_ACILW (Muconate cycloisomerase 1-2 OS=Acinetobacter lwoffii GN=catB2 PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.811e-26
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 2
Query:    5 LPTIRPHKLAMHTMQNQTLVVIRVRCADXXXXXXXXXXXXXLSYGNESPDSIKVNIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDALGKRLNLPVSEL 340
            +PTIRPH+L++ TM  QTLV++R+RCAD             L+YG ESP+SIKVNID +FAPLL G DA+   AAM  L    +GN FA+S +E+AL DA  +RL +P+SEL
Sbjct:   18 VPTIRPHRLSVATMNCQTLVLVRIRCADGVVGVGEGTTIGGLAYGEESPESIKVNIDTYFAPLLKGLDATRPGAAMATLRGLFQGNRFARSAVETALFDAQAQRLGVPLSEL 129          
BLAST of EY720365 vs. ExPASy Swiss-Prot
Match: CATB1_ACILW (Muconate cycloisomerase 1-1 OS=Acinetobacter lwoffii GN=catB1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 54/112 (48.21%), Postives = 76/112 (67.86%), Query Frame = 2
Query:    5 LPTIRPHKLAMHTMQNQTLVVIRVRCADXXXXXXXXXXXXXLSYGNESPDSIKVNIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDALGKRLNLPVSEL 340
            LPTIRPHKL++ TM  QTL++++V C D             ++YG ESP+++K+ ID +FAP L+G+DA+ I   M  L + ++ N FAKS +E+ALLDA GKRL + VSEL
Sbjct:   16 LPTIRPHKLSVATMYGQTLMLVKVYCTDGAVGIGEGTTIAGMAYGPESPEAMKLAIDAYFAPALVGKDATRIQTLMAHLGKLVKINHFAKSALETALLDAHGKRLGVAVSEL 127          
BLAST of EY720365 vs. ExPASy Swiss-Prot
Match: CATB_ACIAD (Muconate cycloisomerase 1 OS=Acinetobacter sp. (strain ADP1) GN=catB PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 2.462e-22
Identity = 55/113 (48.67%), Postives = 73/113 (64.60%), Query Frame = 2
Query:    5 LPTIRPHKLAMHTMQNQTLVVIRVRCADXXXXXXXXXXXXXLSYGNESPDSIKVNIDRHFAPLLLGQDAS-NINAAMLRLERSIRGNTFAKSGIESALLDALGKRLNLPVSEL 340
            +PTIRPHKL++ TMQ QTLV+I++   D             L+YG ESP+S+K NID +F PLLL   A  N+   +  + +SI GN FAK  I++ALL+   KRLN+PVSEL
Sbjct:   12 IPTIRPHKLSVTTMQTQTLVLIKIITEDGIVGWGEATTIGGLNYGEESPESVKANIDTYFKPLLLSIKAPLNVAQTLKLIRKSINGNRFAKCAIQTALLEIQAKRLNVPVSEL 124          
BLAST of EY720365 vs. ExPASy Swiss-Prot
Match: TCBD_PSESQ (Chloromuconate cycloisomerase OS=Pseudomonas sp. (strain P51) GN=tcbD PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.181e-14
Identity = 40/112 (35.71%), Postives = 71/112 (63.39%), Query Frame = 2
Query:    5 LPTIRPHKLAMHTMQNQTLVVIRVRCADXXXXXXXXXXXXXLSYGNESPDSIKVNIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDALGKRLNLPVSEL 340
            +PT RP +++  T+  Q+ V+++V+ A               ++G+ES ++IKV ID + APLL+G+DASN++ A + ++R++ GN  AK+ I+ AL D   + LNL +++L
Sbjct:   13 VPTRRPLQMSFTTVHKQSYVIVQVK-AGGLVGIGEGGSVGGPTWGSESAETIKVIIDNYLAPLLVGKDASNLSQARVLMDRAVTGNLSAKAAIDIALHDLKARALNLSIADL 123          
BLAST of EY720365 vs. ExPASy Swiss-Prot
Match: TFDD_DELAC (Chloromuconate cycloisomerase OS=Delftia acidovorans GN=tfdD PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.089e-13
Identity = 40/112 (35.71%), Postives = 69/112 (61.61%), Query Frame = 2
Query:    5 LPTIRPHKLAMHTMQNQTLVVIRVRCADXXXXXXXXXXXXXLSYGNESPDSIKVNIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDALGKRLNLPVSEL 340
            +PT RP +++  T+  Q+ V+++V  A               ++G+ES ++IKV ID + APLL+G+DASN++ A   ++R++ GN  AK+ I+ AL D   + LNL +++L
Sbjct:   13 VPTRRPLQMSFTTVHKQSYVIVQVT-AGGLVGIGEGGSVGGPTWGSESAETIKVIIDNYLAPLLIGKDASNLSEARALMDRAVTGNLSAKAAIDIALHDLKARALNLSIADL 123          
BLAST of EY720365 vs. ExPASy Swiss-Prot
Match: CBNB_RALEU (Chloromuconate cycloisomerase cbnB OS=Ralstonia eutropha GN=cbnB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.089e-13
Identity = 40/112 (35.71%), Postives = 69/112 (61.61%), Query Frame = 2
Query:    5 LPTIRPHKLAMHTMQNQTLVVIRVRCADXXXXXXXXXXXXXLSYGNESPDSIKVNIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDALGKRLNLPVSEL 340
            +PT RP +++  T+  Q+ V+++V  A               ++G+ES ++IKV ID + APLL+G+DASN++ A   ++R++ GN  AK+ I+ AL D   + LNL +++L
Sbjct:   13 VPTRRPLQMSFTTVHKQSYVIVQVT-AGGLVGIGEGGSVGGPTWGSESAETIKVIIDNYLAPLLIGKDASNLSEARALMDRAVTGNLSAKAAIDIALHDLKARALNLSIADL 123          
BLAST of EY720365 vs. ExPASy Swiss-Prot
Match: CLCB_PSEPU (Chloromuconate cycloisomerase OS=Pseudomonas putida GN=clcB PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.721e-12
Identity = 37/112 (33.04%), Postives = 66/112 (58.93%), Query Frame = 2
Query:    5 LPTIRPHKLAMHTMQNQTLVVIRVRCADXXXXXXXXXXXXXLSYGNESPDSIKVNIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDALGKRLNLPVSEL 340
            +P  RP +++  T+Q Q+  ++++R A               ++ +E  ++IKV I+ + APLL+G+DA+N+      +ER++ GN  AK+ I+ AL D   + LNLP+S+L
Sbjct:   13 VPASRPIQMSFTTVQKQSYAIVQIR-AGGLVGIGEGSSVGGPTWSSECAETIKVIIETYLAPLLIGKDATNLRELQHLMERAVTGNYSAKAAIDVALHDLKARSLNLPLSDL 123          
BLAST of EY720365 vs. ExPASy Swiss-Prot
Match: TFDD1_RALEJ (Chloromuconate cycloisomerase OS=Ralstonia eutropha (strain JMP134) GN=tfdDI PE=1 SV=4)

HSP 1 Score: 66.6254 bits (161), Expect = 4.357e-11
Identity = 35/112 (31.25%), Postives = 64/112 (57.14%), Query Frame = 2
Query:    5 LPTIRPHKLAMHTMQNQTLVVIRVRCADXXXXXXXXXXXXXLSYGNESPDSIKVNIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDALGKRLNLPVSEL 340
            +PT RP ++++ T+  Q+ V++RV                 + +  E  ++IK+ ++R+ AP LLG DA N++ A+  + R++ GN  AK+ +E ALLD   + L + ++EL
Sbjct:   13 VPTKRPIQMSITTVHQQSYVIVRVYSEGLVGVGEGGSVGGPV-WSAECAETIKIIVERYLAPHLLGTDAFNVSGALQTMARAVTGNASAKAAVEMALLDLKARALGVSIAEL 123          
The following BLAST results are available for this feature:
BLAST of EY720365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
CATB_PSEPU2.147e-3467.26Muconate cycloisomerase 1 OS=Pseudomonas putida GN... [more]
CATB2_ACILW2.811e-2652.68Muconate cycloisomerase 1-2 OS=Acinetobacter lwoff... [more]
CATB1_ACILW1.705e-2348.21Muconate cycloisomerase 1-1 OS=Acinetobacter lwoff... [more]
CATB_ACIAD2.462e-2248.67Muconate cycloisomerase 1 OS=Acinetobacter sp. (st... [more]
TCBD_PSESQ7.181e-1435.71Chloromuconate cycloisomerase OS=Pseudomonas sp. (... [more]
TFDD_DELAC2.089e-1335.71Chloromuconate cycloisomerase OS=Delftia acidovora... [more]
CBNB_RALEU2.089e-1335.71Chloromuconate cycloisomerase cbnB OS=Ralstonia eu... [more]
CLCB_PSEPU6.721e-1233.04Chloromuconate cycloisomerase OS=Pseudomonas putid... [more]
TFDD1_RALEJ4.357e-1131.25Chloromuconate cycloisomerase OS=Ralstonia eutroph... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-E02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720365 ID=EY720365; Name=EY720365; organism=Citrus sinensis; type=EST; length=340bp
CCACCTTCCTACCATCCGCCCGCACAAGCTGGCGATGCACACGATGCAGA
ACCAGACCCTGGTGGTCATCCGTGTGCGCTGCGCCGACGGTATCGAAGGC
ATTGGTGAATCCACCACCATCGGCGGCCTGAGCTACGGCAATGAAAGCCC
CGACAGCATCAAGGTCAACATCGACCGGCACTTCGCGCCGCTGCTGCTCG
GTCAGGACGCGAGCAACATCAATGCCGCCATGTTGCGCCTGGAGCGCAGC
ATTCGGGGCAACACTTTTGCCAAGTCGGGTATCGAAAGCGCCTTGCTCGA
CGCCCTCGGCAAACGCCTGAATTTGCCGGTCAGCGAGCTG
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