DR405605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405605 vs. ExPASy Swiss-Prot
Match: PSBK_CITSI (Photosystem II reaction center protein K OS=Citrus sinensis GN=psbK PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.078e-23 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF 276 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF Sbjct: 1 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF 32 HSP 2 Score: 63.5438 bits (153), Expect = 2.078e-23 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 273 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 362 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR Sbjct: 32 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of DR405605 vs. ExPASy Swiss-Prot
Match: PSBK_GOSHI (Photosystem II reaction center protein K OS=Gossypium hirsutum GN=psbK PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.307e-20 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 273 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 362 FLNPIVD MPVIPVLFFLLAFVWQAAVSFR Sbjct: 32 FLNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61 HSP 2 Score: 57.3806 bits (137), Expect = 4.307e-20 Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF 276 MLNIF+L+ IC NSAL+SSSFLFAKLPEAYAF Sbjct: 1 MLNIFNLICICFNSALFSSSFLFAKLPEAYAF 32
BLAST of DR405605 vs. ExPASy Swiss-Prot
Match: PSBK_GOSBA (Photosystem II reaction center protein K OS=Gossypium barbadense GN=psbK PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.307e-20 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 273 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 362 FLNPIVD MPVIPVLFFLLAFVWQAAVSFR Sbjct: 32 FLNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61 HSP 2 Score: 57.3806 bits (137), Expect = 4.307e-20 Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF 276 MLNIF+L+ IC NSAL+SSSFLFAKLPEAYAF Sbjct: 1 MLNIFNLICICFNSALFSSSFLFAKLPEAYAF 32
BLAST of DR405605 vs. ExPASy Swiss-Prot
Match: PSBK_PANGI (Photosystem II reaction center protein K OS=Panax ginseng GN=psbK PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.234e-19 Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 273 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 362 FLNPIVD+MPVIP+ FFLLAFVWQAAVSFR Sbjct: 32 FLNPIVDLMPVIPLFFFLLAFVWQAAVSFR 61 HSP 2 Score: 57.7658 bits (138), Expect = 1.234e-19 Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF 276 MLNIFSL+ ICLNSALYSSS FAKLPEAYAF Sbjct: 1 MLNIFSLICICLNSALYSSSLFFAKLPEAYAF 32
BLAST of DR405605 vs. ExPASy Swiss-Prot
Match: PSBK_DAUCA (Photosystem II reaction center protein K OS=Daucus carota GN=psbK PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 3.534e-19 Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 273 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 362 FLNPIVD+MPVIP+ FFLLAFVWQAAVSFR Sbjct: 32 FLNPIVDLMPVIPLFFFLLAFVWQAAVSFR 61 HSP 2 Score: 56.225 bits (134), Expect = 3.534e-19 Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF 276 MLNIFSL+ ICLNSA YSSS FAKLPEAYAF Sbjct: 1 MLNIFSLICICLNSAFYSSSLFFAKLPEAYAF 32
BLAST of DR405605 vs. ExPASy Swiss-Prot
Match: PSBK_LACSA (Photosystem II reaction center protein K OS=Lactuca sativa GN=psbK PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.900e-18 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 273 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 362 FLNPIVDVMPVIP+ FFLLAFVWQAAVSFR Sbjct: 30 FLNPIVDVMPVIPLFFFLLAFVWQAAVSFR 59 HSP 2 Score: 51.2174 bits (121), Expect = 4.900e-18 Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF 276 MLNIFSL ICLNSALY SS FAKLPEAYAF Sbjct: 1 MLNIFSL--ICLNSALYPSSLFFAKLPEAYAF 30
BLAST of DR405605 vs. ExPASy Swiss-Prot
Match: PSBK_HELAN (Photosystem II reaction center protein K OS=Helianthus annuus GN=psbK PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.900e-18 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 273 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 362 FLNPIVDVMPVIP+ FFLLAFVWQAAVSFR Sbjct: 30 FLNPIVDVMPVIPLFFFLLAFVWQAAVSFR 59 HSP 2 Score: 51.2174 bits (121), Expect = 4.900e-18 Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF 276 MLNIFSL ICLNSALY SS FAKLPEAYAF Sbjct: 1 MLNIFSL--ICLNSALYPSSLFFAKLPEAYAF 30
BLAST of DR405605 vs. ExPASy Swiss-Prot
Match: PSBK_SILLA (Photosystem II reaction center protein K OS=Silene latifolia GN=psbK PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.521e-16 Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 273 FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 362 FL+PIVD MPVIP+LFFLLAFVWQAAVSFR Sbjct: 30 FLSPIVDFMPVIPLLFFLLAFVWQAAVSFR 59 HSP 2 Score: 47.7506 bits (112), Expect = 2.521e-16 Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAF 276 MLNIFSL I LNSALYSSS FAKLPEAYAF Sbjct: 1 MLNIFSL--IGLNSALYSSSCFFAKLPEAYAF 30
BLAST of DR405605 vs. ExPASy Swiss-Prot
Match: PSBK_MORIN (Photosystem II reaction center protein K OS=Morus indica GN=psbK PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.325e-11 Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 3 Query: 240 FFIR*ITRGLRFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 362 FF+ + FLNPIVDVMPVIPVLFFLLAFVWQAAVSFR Sbjct: 21 FFVAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 61 The following BLAST results are available for this feature:
BLAST of DR405605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405605 ID=DR405605; Name=DR405605; organism=Citrus sinensis; type=EST; length=422bpback to top |