DR405590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_CITSI (50S ribosomal protein L33, chloroplastic OS=Citrus sinensis GN=rpl33 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK Sbjct: 1 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_BUXMI (50S ribosomal protein L33, chloroplastic OS=Buxus microphylla GN=rpl33 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.932e-32 Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VRVRVILECTSCVRNGVNKES GISRYITQKNRHNTPSRLELRKFCPYCYKHT+HGEIKK Sbjct: 1 MAKGKDVRVRVILECTSCVRNGVNKESLGISRYITQKNRHNTPSRLELRKFCPYCYKHTIHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_DRIGR (50S ribosomal protein L33, chloroplastic OS=Drimys granadensis GN=rpl33 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.599e-31 Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+RVILECTSCVRN +NKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHT+HGEIKK Sbjct: 1 MAKGKDVRIRVILECTSCVRNDLNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTIHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_CERDE (50S ribosomal protein L33, chloroplastic OS=Ceratophyllum demersum GN=rpl33 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.789e-31 Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VRVRVILECTSC RNG NKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHT HGEIKK Sbjct: 1 MAKGKDVRVRVILECTSCARNGGNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTTHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_CARPA (50S ribosomal protein L33, chloroplastic OS=Carica papaya GN=rpl33 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.290e-30 Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+ RV +ILECTSCVRNGVNKES GISRYITQKNRHNTPSRLELRKFCPYCYKHT+HGEIKK Sbjct: 1 MAKGKDARVTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELRKFCPYCYKHTIHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_EUCGG (50S ribosomal protein L33, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl33 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30 Identity = 59/66 (89.39%), Postives = 64/66 (96.97%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VRV VILECT+CVR G+NKESRG+SRYITQKNRHNTPSRLELRKFCPYCYKHT+HGEIKK Sbjct: 1 MAKGKDVRVTVILECTNCVRTGLNKESRGVSRYITQKNRHNTPSRLELRKFCPYCYKHTIHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_PLAOC (50S ribosomal protein L33, chloroplastic OS=Platanus occidentalis GN=rpl33 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30 Identity = 59/66 (89.39%), Postives = 64/66 (96.97%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VRVRVILEC +CVRNGVNKES G+SRYITQKNRHNTPSRLELRKFCPYC+KHT+HGEIKK Sbjct: 1 MAKGKDVRVRVILECINCVRNGVNKESPGVSRYITQKNRHNTPSRLELRKFCPYCFKHTIHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_GOSHI (50S ribosomal protein L33, chloroplastic OS=Gossypium hirsutum GN=rpl33 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.901e-30 Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAK K+VRV +ILECTSCVRNGVNKES GISRYITQKNRHNTPSRLEL+KFCPYCYKHT+HGEIKK Sbjct: 1 MAKSKDVRVTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELKKFCPYCYKHTIHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_GOSBA (50S ribosomal protein L33, chloroplastic OS=Gossypium barbadense GN=rpl33 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.901e-30 Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAK K+VRV +ILECTSCVRNGVNKES GISRYITQKNRHNTPSRLEL+KFCPYCYKHT+HGEIKK Sbjct: 1 MAKSKDVRVTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELKKFCPYCYKHTIHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_PANGI (50S ribosomal protein L33, chloroplastic OS=Panax ginseng GN=rpl33 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.401e-30 Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+ VILECTSCVRNGVNK S GISRYITQKNRHNTP+RLELRKFCPYCYKHT+HGEIKK Sbjct: 1 MAKGKDVRITVILECTSCVRNGVNKVSTGISRYITQKNRHNTPNRLELRKFCPYCYKHTIHGEIKK 66 The following BLAST results are available for this feature:
BLAST of DR405590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405590 ID=DR405590; Name=DR405590; organism=Citrus sinensis; type=EST; length=718bpback to top |