DR405254

Overview
NameDR405254
Unique NameDR405254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405254 vs. ExPASy Swiss-Prot
Match: XYLB_PONAB (Xylulose kinase OS=Pongo abelii GN=XYLB PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.259e-43
Identity = 92/190 (48.42%), Postives = 119/190 (62.63%), Query Frame = 2
Query:  122 LGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEAXXXXXXXXXXXXXXXX-VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQFGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIR*LFQTQPGVYDNTERISVVSSF 688
            LG+D STQ +K   +D+ LN+   E + FD +LP + T+ GV+    +   + SP LMW++A                 V A+SG+GQQHGS+YWK GS   L+SL P  PL  Q  D FS  + PVWMDSS+T QCR++E A+GGA  LS LTGSR YERFTG QI  ++Q  P  Y +TERIS+VSSF
Sbjct:   11 LGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVH-KDGLTVTSPVLMWVQALDIILEKMKASGFDFSQVLALSGAGQQHGSIYWKAGSQQALTSLSPDLPLHQQLQDCFSISDCPVWMDSSSTTQCRQLEAAMGGAQALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSF 199          
BLAST of DR405254 vs. ExPASy Swiss-Prot
Match: XYLB_MOUSE (Xylulose kinase OS=Mus musculus GN=Xylb PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.259e-43
Identity = 93/190 (48.95%), Postives = 119/190 (62.63%), Query Frame = 2
Query:  122 LGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEAXXXXXXXXXXXXXXXX-VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQFGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIR*LFQTQPGVYDNTERISVVSSF 688
            LG+D STQ +K   +D+ LN+   + + FD +LP + T+ GV+    +   + SP LMW++A                 V A+SG+GQQHGSVYWK G++  LSSL P  PL  Q    FS  + P+WMDSSTTAQC ++E AVGGA  LS LTGSR YERFTG QI  LFQ  P  Y ++ERIS+VSSF
Sbjct:   26 LGWDFSTQQVKVVAVDAELNVFYEDSVHFDRDLPEFGTQGGVHVH-KDRLTVTSPVLMWVQALDLILGKMKSSGFDFSQVLALSGAGQQHGSVYWKTGASLALSSLSPALPLHQQLQSCFSISDCPIWMDSSTTAQCHQLEAAVGGAQALSCLTGSRAYERFTGNQIAKLFQKNPEAYSHSERISLVSSF 214          
BLAST of DR405254 vs. ExPASy Swiss-Prot
Match: XYLB_HUMAN (Xylulose kinase OS=Homo sapiens GN=XYLB PE=1 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 1.644e-43
Identity = 93/190 (48.95%), Postives = 119/190 (62.63%), Query Frame = 2
Query:  122 LGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEAXXXXXXXXXXXXXXXX-VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQFGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIR*LFQTQPGVYDNTERISVVSSF 688
            LG+D STQ +K   +D+ LN+   E + FD +LP + T+ GV+    +   + SP LMW++A                 V A+SG+GQQHGS+YWK G+   L+SL P   L  Q  D FS  + PVWMDSSTTAQCR++E AVGGA  LS LTGSR YERFTG QI  ++Q  P  Y +TERIS+VSSF
Sbjct:   11 LGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVH-KDGLTVTSPVLMWVQALDIILEKMKASGFDFSQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSF 199          
BLAST of DR405254 vs. ExPASy Swiss-Prot
Match: XYLB_RAT (Xylulose kinase OS=Rattus norvegicus GN=Xylb PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.066e-42
Identity = 92/190 (48.42%), Postives = 118/190 (62.11%), Query Frame = 2
Query:  122 LGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEAXXXXXXXXXXXXXXXX-VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQFGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIR*LFQTQPGVYDNTERISVVSSF 688
            LG+D STQ +K   +D+ LN+   + + FD +LP + T+ GV+    +   + SP LMW++A                 V A+SG+GQQHGSVYWK G++  LSSL P   L  Q    FS  + P+WMDSSTTAQC ++E AVGGA  LS LTGSR YERFTG QI  +FQ  P  Y N+ERIS+VSSF
Sbjct:   11 LGWDFSTQQVKVVAVDAELNVFYEDSVHFDRDLPEFGTQGGVHVH-KDRLTVTSPVLMWVQALDLILEKMKASGFDFSQVLALSGAGQQHGSVYWKTGASLALSSLSPALLLHQQLQACFSVSDCPIWMDSSTTAQCHQLEAAVGGAQALSCLTGSRAYERFTGNQISKIFQKNPEAYSNSERISLVSSF 199          
BLAST of DR405254 vs. ExPASy Swiss-Prot
Match: XYLB_BOVIN (Xylulose kinase OS=Bos taurus GN=XYLB PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.289e-42
Identity = 90/190 (47.37%), Postives = 119/190 (62.63%), Query Frame = 2
Query:  122 LGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEAXXXXXXXXXXXXXXXX-VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQFGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIR*LFQTQPGVYDNTERISVVSSF 688
            LG+D STQ +K   +D+ L++   + + FD +L  + T+ GV+    +   + SP LMW++A                 V A+SG+GQQHGSVYWK G++ +L+SL P  PL +Q    FS    PVWMDSST AQCR++E AVGGA  LS LTGSR YERFTG QI  ++Q  P  Y +TERIS+VSSF
Sbjct:   11 LGWDFSTQQVKVVAVDAELSVFYEDSVHFDRDLVEFGTQGGVHVH-KDGLTVTSPVLMWVQALDIILEKMKASGFDFSQVLALSGAGQQHGSVYWKTGASQVLTSLSPDLPLREQLQACFSISNCPVWMDSSTAAQCRQLEAAVGGAQALSLLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSF 199          
BLAST of DR405254 vs. ExPASy Swiss-Prot
Match: XKS1_YEAST (Xylulose kinase OS=Saccharomyces cerevisiae GN=XKS1 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37
Identity = 85/198 (42.93%), Postives = 119/198 (60.10%), Query Frame = 2
Query:  110 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEAXXXXXXXXXXXXXXXX-VTAVSGSGQQHGSVYWKKGSATILSSLD--PKKPLVDQFGD-AFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIR*LFQTQPGVYDNTERISVVSSFM 691
            DS +LGFD STQ LK   ++ +L IV SE ++F+ +LPHY TK GVY    +   I  P  MW+EA                 V AVSGS QQHGSVYW   + ++L  L+  P+K L+      AF+ + +P W D ST  QC+E E+ +GG  ++++LTGSR + RFTGPQI  + Q +P  Y+ T+ IS+VS+F+
Sbjct:   20 DSYYLGFDLSTQQLKCLAINQDLKIVHSETVEFEKDLPHYHTKKGVY---IHGDTIECPVAMWLEALDLVLSKYREAKFPLNKVMAVSGSCQQHGSVYWSSQAESLLEQLNKKPEKDLLHYVSSVAFARQTAPNWQDHSTAKQCQEFEECIGGPEKMAQLTGSRAHFRFTGPQILKIAQLEPEAYEKTKTISLVSNFL 214          
BLAST of DR405254 vs. ExPASy Swiss-Prot
Match: XKS1_SCHPO (Xylulose kinase OS=Schizosaccharomyces pombe GN=xks1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36
Identity = 81/192 (42.19%), Postives = 112/192 (58.33%), Query Frame = 2
Query:  116 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEAXXXXXXXXXXXXXXXXVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQFGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIR*LFQTQPGVYDNTERISVVSSFM 691
            +FLG D STQ LK  V+D +LN+     + FD +L  Y T  GVYR   N   + +P  MW++A                + A+SG+GQQH SV+  KGS   L+SLD K  L  Q  ++     SP W D+STT +C E+E  +GGA  L+ LTGS+ + RFTGPQI+   +  P  Y+NTERI++VS+F+
Sbjct:    1 MFLGLDLSTQQLKGVVIDESLNVHQEVAVDFDRDLSDYNTIKGVYR---NGYEVFAPVCMWLDAIDLLFERLKASVDVSKIQAISGAGQQHASVFLLKGSKKALNSLDAKSSLKQQL-ESLIHPTSPNWQDASTTKECEELESCIGGAKALADLTGSKAHLRFTGPQIKRFRRLHPETYENTERIALVSNFL 188          
BLAST of DR405254 vs. ExPASy Swiss-Prot
Match: YNE7_CAEEL (Uncharacterized sugar kinase R08D7.7 OS=Caenorhabditis elegans GN=R08D7.7 PE=2 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 1.947e-36
Identity = 77/192 (40.10%), Postives = 115/192 (59.90%), Query Frame = 2
Query:  119 FLGFDSSTQSLKATVLDSNLNIVASEQLQFDS--ELPHYKTKDGVYRDPSNNGRIVSPTLMWIEAXXXXXXXXXXXXXXXXVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQFGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIR*LFQTQPGVYDNTERISVVSSF 688
            FLG D STQ +KA ++D N  +V +  + F +  +L  + T++GV++   N   I SP +MWIEA                +  +SG  QQHG+VYWK G+   L  LD  + L +Q    FS ++SP+WMDSST  QC+E+E  VGG  E++KLTGSR + RF+  QI+ +   +  V+ +TE++S++SSF
Sbjct:    5 FLGIDLSTQQIKAVIIDQNGKVVHTTAINFSTHEKLKKFGTENGVHK---NGSVITSPVIMWIEAIDILFNDLRENGWTDKLRGISGCAQQHGTVYWKNGAENSLKGLDESRSLAEQLEMCFSVQKSPIWMDSSTEKQCQELETFVGGDQEMAKLTGSRAHHRFSAAQIKKIVDEKQDVWKDTEKVSLISSF 193          
The following BLAST results are available for this feature:
BLAST of DR405254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
XYLB_PONAB1.259e-4348.42Xylulose kinase OS=Pongo abelii GN=XYLB PE=2 SV=1[more]
XYLB_MOUSE1.259e-4348.95Xylulose kinase OS=Mus musculus GN=Xylb PE=2 SV=1[more]
XYLB_HUMAN1.644e-4348.95Xylulose kinase OS=Homo sapiens GN=XYLB PE=1 SV=3[more]
XYLB_RAT1.066e-4248.42Xylulose kinase OS=Rattus norvegicus GN=Xylb PE=2 ... [more]
XYLB_BOVIN5.289e-4247.37Xylulose kinase OS=Bos taurus GN=XYLB PE=2 SV=1[more]
XKS1_YEAST8.738e-3742.93Xylulose kinase OS=Saccharomyces cerevisiae GN=XKS... [more]
XKS1_SCHPO1.141e-3642.19Xylulose kinase OS=Schizosaccharomyces pombe GN=xk... [more]
YNE7_CAEEL1.947e-3640.10Uncharacterized sugar kinase R08D7.7 OS=Caenorhabd... [more]
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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240O05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240O05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405254 ID=DR405254; Name=DR405254; organism=Citrus sinensis; type=EST; length=693bp
GGGGAACAACTCCACATACAATTAGCAACAAACAAAAGACTGAGCTCTGC
NNNNNNCCAAAATTGAACACAAAAGCATAAAACAAATGGAGGATTATTCC
CTTCCAAAGGACTCTCTTTTTCTCGGATTTGACAGCTCTACTCAGTCATT
GAAGGCAACTGTTTTGGACTCAAATCTCAACATTGTCGCTTCCGAGCAAC
TACAGTTTGACTCTGAATTGCCCCATTACAAGACCAAAGATGGGGTATAC
CGAGACCCTTCGAATAATGGCAGAATTGTTTCTCCCACCCTCATGTGGAT
TGAGGCTTTGGATTTGATGCTTCAAAAACTCTCCAAATCTTTGGATTTGT
CCAAAGTTACAGCTGTTTCTGGTAGCGGACAGCAACATGGTAGTGTGTAT
TGGAAGAAAGGCAGTGCTACTATTTTGTCATCTTTAGATCCAAAGAAGCC
GTTGGTTGATCAATTTGGTGATGCCTTTTCAACTAAGGAATCTCCGGTGT
GGATGGATAGCAGCACCACAGCTCAATGTAGGGAGATAGAGAAGGCTGTT
GGTGGTGCATTGGAGTTGTCTAAACTTACAGGATCACGTGGTTATGAAAG
ATTCACCGGACCCCAGATTAGGTAGTTATTTCAAACACAGCCAGGAGTTT
ATGACAATACTGAGAGGATTTCCGTTGTTAGCTCTTTCATGGC
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