DR405092

Overview
NameDR405092
Unique NameDR405092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405092 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.975e-24
Identity = 64/173 (36.99%), Postives = 92/173 (53.18%), Query Frame = 3
Query:  153 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVK 671
            +L G+V               +LF K+GA+VV+AD+QD LG +L  +LG     Y+HCDV+NE +V   VD  VA+FGKLD++ N    +       + +  K D E +LAVN +G FL  KHAARVM P RRG I+ T    ++            ++ Y  SK  ++G  +
Sbjct:   14 KLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFN-NAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSV-------SGAASHAYTTSKHALVGFTE 178          
BLAST of DR405092 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.007e-18
Identity = 65/176 (36.93%), Postives = 91/176 (51.70%), Query Frame = 3
Query:  153 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKF-GKLDILVNTGCNL--EYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVK 671
            RL G+V               +LF K+GA+VVIAD+ D  G+ALA  LG Q V ++ CDVS E +V   VD  +++  G+LD+  N    L  + R   SIL    ++ + +L VN +G  L  KHAAR M PRR G I+        + A + G   +  + Y  SK  I+GL K
Sbjct:   52 RLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQ-VSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIV-----SVASVAAVLG--GLGPHAYTASKHAIVGLTK 219          
BLAST of DR405092 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.233e-16
Identity = 65/179 (36.31%), Postives = 86/179 (48.04%), Query Frame = 3
Query:  147 SIRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKL----GNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVK 671
            S RL G+V               +LFHK+GAKV I D+QD+LG  +   L      +   +IH DV  E ++ N VD  V  FG LDIL+N    L       I +   S+ E    VN  G FL  KHAARVM+P ++G I+     G      + G    P +Y G SK  +LGL +
Sbjct:   15 SQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNA-GLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVG----GVVGGVG--PHSYVG-SKHAVLGLTR 185          
BLAST of DR405092 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 3
Query:  216 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVK 671
            Q F    A VV+AD+ +  G+A+  K  N  + ++H D+++E    N + + V KFG LD+L+N   N        I +   S+   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L L +
Sbjct:   23 QAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLIN---NAGIEIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVG-----GVVAWPDIPA--YNASKGGVLQLTR 164          
BLAST of DR405092 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12
Identity = 49/148 (33.11%), Postives = 75/148 (50.68%), Query Frame = 3
Query:  216 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGIL 659
            Q F    A VV+AD+ +  G+A+  K  N  + ++  D++NE    N + + V KFG LD+L+N   N        I +   SD   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L
Sbjct:   23 QAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVQTDITNEPACQNAILSAVDKFGGLDVLIN---NAGIEIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVG-----GVVAWPDIPA--YNASKGGVL 160          
BLAST of DR405092 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 3
Query:  156 LQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGT 578
            L+G+V               QLF +NG KVVIA++ +  G    + L  +  DV ++  DV++E  V N+V  TV  +G +D+LVN    +  +   SI + P  + E ++ VN  G ++ +++ A  M+ R  G I+    T
Sbjct:    2 LEGKVAVVTGGGQGIGAAIAQLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVMSVK---SIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIAST 141          
BLAST of DR405092 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12
Identity = 49/152 (32.24%), Postives = 77/152 (50.66%), Query Frame = 3
Query:  216 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVK 671
            Q F    A VV+AD+ +  G+A+  K  N  + ++  D+++E    + V++ V  FG LD+L+N   N        I +   SD   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L L K
Sbjct:   23 QAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLIN---NAGIEIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVG-----GLVAWPDIPA--YNASKGGVLQLTK 164          
The following BLAST results are available for this feature:
BLAST of DR405092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MOMAS_ORYSJ7.975e-2436.99Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
TS2_MAIZE5.007e-1836.93Sex determination protein tasselseed-2 OS=Zea mays... [more]
ABA2_ARATH1.233e-1636.31Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
BACC2_BACSU1.080e-1232.24Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
BACC_BACAM3.143e-1233.11Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y019_THEMA5.362e-1230.07Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
BACC_BACSU9.146e-1232.24Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240F15 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240F15 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405092 ID=DR405092; Name=DR405092; organism=Citrus sinensis; type=EST; length=671bp
GGGAATCACACTGCCAAGAGAAGGAAATAATCACAAGCCAAACCTTGTAT
TTTAACAATCTTGATTGAGTTTCAGGTTTTTGAGGAAATTTTTTCACACA
GGCTTGTAGTACTACTGCAGCAGCACCCTGCGAAAGGTGTCAACTCAGCA
TTCGGTTACAAGGCAGAGTGGCAATCATTACTGGCGGAGCAAGCGGGATC
GGAGCATCTGCGGCTCAGCTTTTCCACAAAAATGGAGCCAAAGTTGTCAT
AGCCGATGTGCAAGATAATCTTGGCCAAGCCCTAGCCGATAAGCTAGGCA
ACCAGGATGTCTGCTACATCCATTGTGATGTATCAAATGAAAGGGAAGTC
ATCAATCTTGTTGATACCACCGTTGCTAAATTCGGAAAGCTCGACATCCT
GGTCAATACCGGATGCAATCTTGAGTATCGTGGTTTCGTGAGCATTTTGG
ACACCCCAAAGTCTGATCTAGAACATTTACTGGCTGTGAACACAATTGGT
GGTTTCTTAGTAGCCAAGCATGCTGCAAGAGTCATGGTGCCACGCCGCAG
AGGTTGCATATTGTATACAACGGGTACGGGCACTACTGCTTGTGCGGAAA
TTGAAGGTTTCTGCAATATTCCAGCTAATTATTATGGAGTGTCAAAATTT
GGTATCTTGGGACTTGTCAAG
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