DR405023

Overview
NameDR405023
Unique NameDR405023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR405023 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.439e-24
Identity = 59/113 (52.21%), Postives = 71/113 (62.83%), Query Frame = 2 
Query:    5 VVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMXXXXXXXXXXXXXXXXXXXRKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 343
            +VAGPQP+RGLG LRK+   PL +K+ GE+           S                    RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:   11 IVAGPQPERGLGMLRKVPQ-PLNLKDEGES-----------SKITMPTTPTTPVTPTTPISARKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of DR405023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN4.439e-2452.21Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240C08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405023 ID=DR405023; Name=DR405023; organism=Citrus sinensis; type=EST; length=651bp
GGGGGTTGTGGCAGGGCCTCAGCCTGATCGTGGCCTTGGCAGGCTGAGGA
AAATCACCACAACACCCTTAGCAGTCAAAGAGGGTGGTGAGGCGGAGTCG
TCGTCGGGCAAGTTCCAGAGGTCTCTGTCAATGCCAGCGAGTCCAGGGGC
ACCGTCGACGCCAGTGACGCCGACGACGCCGCTGTCGGCGCGTAAGGACA
ACGTGTGGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTACTAGGGGT
ATCGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACTCTCCCACTGT
TTATGACTGGCTTTACAGTGGGGAGACTAGGAGCAAGCATCATCACTAGT
GGATGATACGCTACAGCGATGTAAATGAATGTGATGGGTCACCAACTCAC
CGGATGAGTTGCCTGTAGTCTGTAGATAGTGTCGTTTCGTTTTGGATTTC
GCAACGTGTCCTTGTCGTTTTGTTAATGCTATTTGTATTACGTGTCCTTC
CTATCTAAAGTTTGGTTTTAAAATGCTGCTGACTAAAAGTAAATTAAAGA
CTGTGATGTTTTTATATCATATAATTTAATAATTGTATGTGATGTGAGGA
TTGCTAAGCTGTGGGCGGAGATGAAAGGTTGCTGGTTTTTGGGTTTAGGA
C
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