EY679342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679342 vs. ExPASy Swiss-Prot
Match: PSAH2_ARATH (Photosystem I reaction center subunit VI-2, chloroplastic OS=Arabidopsis thaliana GN=PSAH2 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.294e-50 Identity = 92/108 (85.19%), Postives = 99/108 (91.67%), Query Frame = 2 Query: 2 SLATIAAVQP-ATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETLAAPFTKRGLLLKFLIIG 322 S ATIAAVQP A +KGLGGSSLAG KL +KP+RQSF+ KS +AGAVVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFET AAPFTKRGLLLKFLI+G Sbjct: 3 SFATIAAVQPSAAVKGLGGSSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILG 110 HSP 2 Score: 36.5798 bits (83), Expect = 1.294e-50 Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 3 Query: 342 YFNATARGDILPITKGLSLPPKPGPRGMI 428 Y +A + GD+LPI +G PPK GPRG + Sbjct: 117 YVSANSTGDVLPIKRGPQEPPKLGPRGKL 145
BLAST of EY679342 vs. ExPASy Swiss-Prot
Match: PSAH_BRARA (Photosystem I reaction center subunit VI, chloroplastic OS=Brassica rapa GN=PSAH PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 2.865e-50 Identity = 92/108 (85.19%), Postives = 99/108 (91.67%), Query Frame = 2 Query: 2 SLATIAAVQP-ATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETLAAPFTKRGLLLKFLIIG 322 S ATIAAVQP + +KGLGGSSL G KL +KP+RQSF+PKS +AGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYN LQSKFFET AAPFTKRGLLLKFLI+G Sbjct: 3 SFATIAAVQPYSAVKGLGGSSLTGAKLFIKPSRQSFKPKSTRAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILG 110 HSP 2 Score: 33.8834 bits (76), Expect = 2.865e-50 Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 3 Query: 342 YFNATARGDILPITKGLSLPPKPGPRGMI 428 Y +A++ GD+LPI +G PK GPRG + Sbjct: 117 YVSASSTGDVLPIKRGPQEKPKLGPRGKL 145
BLAST of EY679342 vs. ExPASy Swiss-Prot
Match: PSAH1_ARATH (Photosystem I reaction center subunit VI-1, chloroplastic OS=Arabidopsis thaliana GN=PSAH1 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 2.865e-50 Identity = 90/108 (83.33%), Postives = 99/108 (91.67%), Query Frame = 2 Query: 2 SLATIAAVQP-ATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETLAAPFTKRGLLLKFLIIG 322 SLAT+AAV+P A IKGLGGSSLAG KL++KP+R SF+PKS +A VVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFET AAPFTKRGLLLKFLI+G Sbjct: 3 SLATVAAVKPSAAIKGLGGSSLAGAKLSIKPSRLSFKPKSIRANGVVAKYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILG 110 HSP 2 Score: 36.965 bits (84), Expect = 2.865e-50 Identity = 15/29 (51.72%), Postives = 21/29 (72.41%), Query Frame = 3 Query: 342 YFNATARGDILPITKGLSLPPKPGPRGMI 428 Y +AT+ G++LPI +G PPK GPRG + Sbjct: 117 YVSATSTGEVLPIKRGPQEPPKLGPRGKL 145
BLAST of EY679342 vs. ExPASy Swiss-Prot
Match: PSAH_SPIOL (Photosystem I reaction center subunit VI, chloroplastic OS=Spinacia oleracea GN=PSAH PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.865e-50 Identity = 86/107 (80.37%), Postives = 98/107 (91.59%), Query Frame = 2 Query: 2 SLATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETLAAPFTKRGLLLKFLIIG 322 SLAT+AAVQP T+KGL GSS+AGTKL +KP RQSF+ + ++GA+VAKYGDKSVYFDLED+ NTTGQWD+YGSDAPSPYNSLQSKFFET AAPFTKRGLLLKFLI+G Sbjct: 3 SLATLAAVQPTTLKGLAGSSIAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDLEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 109 HSP 2 Score: 37.7354 bits (86), Expect = 2.865e-50 Identity = 17/29 (58.62%), Postives = 20/29 (68.97%), Query Frame = 3 Query: 342 YFNATARGDILPITKGLSLPPKPGPRGMI 428 Y +A A D+LPIT+G PPK GPRG I Sbjct: 116 YVSANAPQDVLPITRGPQQPPKLGPRGKI 144
BLAST of EY679342 vs. ExPASy Swiss-Prot
Match: PSAH_ORYSJ (Photosystem I reaction center subunit VI, chloroplastic OS=Oryza sativa subsp. japonica GN=PSAH PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.992e-43 Identity = 76/111 (68.47%), Postives = 91/111 (81.98%), Query Frame = 2 Query: 5 LATIAAVQPATIKGLGGSSLAGTKLTVKPT-----RQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETLAAPFTKRGLLLKFLIIG 322 +A++ AVQP +KGL GSS++G KL V+P+ R + RP++ AVVAKYG+KSVYFDLED+GNTTGQWDLYGSDAPSPYN LQSKFFET A PFTKRGLLLKFL++G Sbjct: 1 MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRA----AVVAKYGEKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLG 107 HSP 2 Score: 42.3578 bits (98), Expect = 2.992e-43 Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 339 AYFNATARGDILPITKGLSLPPKPGPRGMI 428 AY +A+A D+LPI KG LPP PGPRG I Sbjct: 113 AYVSASASPDLLPIKKGPQLPPTPGPRGKI 142
BLAST of EY679342 vs. ExPASy Swiss-Prot
Match: PSAH_ORYSI (Photosystem I reaction center subunit VI, chloroplastic OS=Oryza sativa subsp. indica GN=PSAH PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.992e-43 Identity = 76/111 (68.47%), Postives = 91/111 (81.98%), Query Frame = 2 Query: 5 LATIAAVQPATIKGLGGSSLAGTKLTVKPT-----RQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETLAAPFTKRGLLLKFLIIG 322 +A++ AVQP +KGL GSS++G KL V+P+ R + RP++ AVVAKYG+KSVYFDLED+GNTTGQWDLYGSDAPSPYN LQSKFFET A PFTKRGLLLKFL++G Sbjct: 1 MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRA----AVVAKYGEKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLG 107 HSP 2 Score: 42.3578 bits (98), Expect = 2.992e-43 Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 339 AYFNATARGDILPITKGLSLPPKPGPRGMI 428 AY +A+A D+LPI KG LPP PGPRG I Sbjct: 113 AYVSASASPDLLPIKKGPQLPPTPGPRGKI 142
BLAST of EY679342 vs. ExPASy Swiss-Prot
Match: PSAH_HORVU (Photosystem I reaction center subunit VI, chloroplastic OS=Hordeum vulgare GN=PSAH PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 6.620e-43 Identity = 74/108 (68.52%), Postives = 89/108 (82.41%), Query Frame = 2 Query: 5 LATIAAVQPATIKGLGGSSLAGTKLTVKPTRQSFRPKSFKA--GAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETLAAPFTKRGLLLKFLIIG 322 +A++ AVQPA +KGL GSS++G KL V+P+ + + +A AVVAKYG+KSVYFDL+D+ NTTGQWDLYGSDAPSPYN LQSKFF T AAPFTKRGLLLKFL+IG Sbjct: 1 MASLVAVQPAAVKGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLDDIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIG 108 HSP 2 Score: 42.3578 bits (98), Expect = 6.620e-43 Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 339 AYFNATARGDILPITKGLSLPPKPGPRGMI 428 AY +A+A D+LPI KG LPP PGPRG I Sbjct: 114 AYVSASASPDLLPIKKGPQLPPTPGPRGKI 143
BLAST of EY679342 vs. ExPASy Swiss-Prot
Match: PSAH_MAIZE (Photosystem I reaction center subunit VI, chloroplastic OS=Zea mays GN=PSAH PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 5.505e-42 Identity = 78/109 (71.56%), Postives = 92/109 (84.40%), Query Frame = 2 Query: 5 LATIAAV--QPATIKGLGGSSLAGTKLTV-KPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETLAAPFTKRGLLLKFLIIG 322 +A++AAV +P IKGL GSS++G KL V +P+ +S R +A AVVAKYGDKSVYFDL+D+GNTTGQWDLYGSDAPSPYN LQSKFFET AAPFTKRGLLLKFL++G Sbjct: 1 MASLAAVSVKPVAIKGLAGSSISGRKLAVARPSARSIRRP--RAAAVVAKYGDKSVYFDLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLG 107 HSP 2 Score: 40.4318 bits (93), Expect = 5.505e-42 Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 339 AYFNATARGDILPITKGLSLPPKPGPRGMI 428 AY +A+A D+LPI KG PP+PGPRG I Sbjct: 113 AYVSASASPDLLPIKKGPQEPPQPGPRGKI 142
BLAST of EY679342 vs. ExPASy Swiss-Prot
Match: PSAH_PEA (Photosystem I reaction center subunit VI (Fragment) OS=Pisum sativum GN=PSAH PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.614e-13 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 2 Query: 143 KYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQ 250 KYGDKSVYFDLED+GNTTGQWDLYGSDAPSPY+ LQ Sbjct: 1 KYGDKSVYFDLEDIGNTTGQWDLYGSDAPSPYSXLQ 36 The following BLAST results are available for this feature:
BLAST of EY679342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679342 ID=EY679342; Name=EY679342; organism=Citrus sinensis; type=EST; length=903bpback to top |