FC922074

Overview
NameFC922074
Unique NameFC922074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC922074 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13
Identity = 51/130 (39.23%), Postives = 72/130 (55.38%), Query Frame = -3 
Query:  325 LSIAASVFT-----TAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDF-SKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNISQVCLAFAGNSDPTDVSIFGNTQQHTLEVVYD 696
            L I +S F      T G IIDSGT +T LP DAY  +  AF   ++      + S L TC+   S  STV +P+IS+ F GGV +++ +  I+ +     +CLA  G+S    +SIFGN QQ   +V+YD
Sbjct:  295 LGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGV-LNLGEQNILISPAEGVICLAM-GSSSQLGISIFGNIQQQETQVLYD 422
The following BLAST results are available for this feature:
BLAST of FC922074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NEP2_NEPGR2.395e-1339.23Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM1DC02RM1 SLH Citrus sinensis cDNA clone KN0AAM1DC02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922074 ID=FC922074; Name=FC922074; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTTTATATAAACAATTGATTCAAAGTCATCATTGCT
TGTGACAAACGAGATCTTATACAATCACAGGCCTATGGCCATACATACAA
TTATTTGATTGGATTGAATACTATTCATCTACATCTTGCAGCAGCAGTAA
ATTTAACTCCCATTTTTGATACAGACACTAATTATCATTTCCCTTTTTGT
CTCCCATAGAAGTTCTTAATCTTCCAATATTATTCTTAAATGCTTGCATT
AAGCTCGCTCACCTAATTAAATAGACTAGCTAGCTGCAGCCACCAGCAGC
AAACCCAACTTTCCCTCCGGCAACATCATAAACAACCTCCAAGGTATGTT
GCTGCGTATTTCCGAAAATGCTCACATCTGTCGGATCACTATTCCCCGCA
AACGCCAAACAAACCTGAGATATATTACTCGCGTACATAATCCCTGTCTT
ATCAACACTCACCTCCACACCTCCACTGAAGAACAAGCTTATCTGAGGGA
GAGTGACAGTACTATACTTACTAAAATCATAACATGTGTCAAGAAGCGAC
AGCGCGGGCGCAGTCGGATACTTGGACATAAACTGACGGAATGCTGTCCG
CAGAGGGGTGTATGCATCCGGAGGCAGACGTGTGATGACAGTTCCGGAGT
CTATAATTGTACCGGCTGTAGTGAAAACTGACGCGGCAATGGATAGTTTT
TGGC
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