DR404644

Overview
NameDR404644
Unique NameDR404644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6209 contig Csv1_Contig6209:1..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404644 vs. ExPASy Swiss-Prot
Match: ARK2_ARATH (Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.059e-17
Identity = 41/53 (77.36%), Postives = 48/53 (90.57%), Query Frame = 1
Query:  418 QPRNAEETVTDADFADCVALQTELKRLKLRKNNWNSDTYEFDEVFTESAS*KR 576
            +PRNA+E+V DADFADCV LQ ELKRLKLRKNNW+++TYEFDEV TE+AS KR
Sbjct:   68 RPRNADESVADADFADCVELQPELKRLKLRKNNWDTETYEFDEVLTEAASQKR 120          
BLAST of DR404644 vs. ExPASy Swiss-Prot
Match: ARK1_ARATH (Armadillo repeat-containing kinesin-like protein 1 OS=Arabidopsis thaliana GN=ARK1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.518e-16
Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 1
Query:  355 SQAADFXXXXXXXXXXXXXXXQPRNAEETVTDADFADCVALQTELKRLKLRKNNWNSDTYEFDEVFTESAS*KR 576
            SQ+ DF               +PRN EE ++DADFAD V LQ E+KRLKLRKNNWNS++Y+FDEVFT++AS KR
Sbjct:   91 SQSKDFDDDNDPGRVRVSVRVRPRNGEELISDADFADLVELQPEIKRLKLRKNNWNSESYKFDEVFTDTASQKR 164          
BLAST of DR404644 vs. ExPASy Swiss-Prot
Match: ARK3_ARATH (Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.983e-16
Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 1
Query:  418 QPRNAEETVTDADFADCVALQTELKRLKLRKNNWNSDTYEFDEVFTESAS*KR 576
            +PRN EE + DADFADCV LQ ELKRLKLRKNNW++DT+EFDEV TE AS KR
Sbjct:   78 RPRNGEELIADADFADCVELQPELKRLKLRKNNWDTDTFEFDEVLTEYASQKR 130          
BLAST of DR404644 vs. ExPASy Swiss-Prot
Match: ARK2_ORYSJ (Armadillo repeat-containing kinesin-like protein 2 OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 1
Query:  418 QPRNAEETVTDADFADCVALQTELKRLKLRKNNWNSDTYEFDEVFTESAS*KR 576
            +PRNA+E   DADF DCV LQ ELKRLKLRKNNW S+TYEFDEV TE AS KR
Sbjct:   62 RPRNADELAADADFGDCVELQPELKRLKLRKNNWESETYEFDEVLTEFASQKR 114          
BLAST of DR404644 vs. ExPASy Swiss-Prot
Match: ARK1_ORYSJ (Armadillo repeat-containing kinesin-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0152900 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 1
Query:  418 QPRNAEETVTDADFADCVALQTELKRLKLRKNNWNSDTYEFDEVFTESAS*KR 576
            +P+N+E+    ADF  CV LQ E K+LKL+KNNW+ ++Y FDEVF+E+AS KR
Sbjct:   65 RPKNSEDLAHGADFDSCVELQPECKKLKLKKNNWSCESYRFDEVFSENASQKR 117          
The following BLAST results are available for this feature:
BLAST of DR404644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ARK2_ARATH3.059e-1777.36Armadillo repeat-containing kinesin-like protein 2... [more]
ARK1_ARATH1.518e-1656.76Armadillo repeat-containing kinesin-like protein 1... [more]
ARK3_ARATH1.983e-1675.47Armadillo repeat-containing kinesin-like protein 3... [more]
ARK2_ORYSJ5.770e-1675.47Armadillo repeat-containing kinesin-like protein 2... [more]
ARK1_ORYSJ4.279e-1156.60Armadillo repeat-containing kinesin-like protein 1... [more]
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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243P21 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243P21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404644 ID=DR404644; Name=DR404644; organism=Citrus sinensis; type=EST; length=751bp
GGGGGCCATTCAAAACTCCACCATTCTGCCACCATCCAAACCATCATTCT
CAATTGGACACCCATTTCGCATCTTTTTTCAGTCTCTTTGTCCTTTCGCC
ACAAGCTATTCAGCGAACCCTCACCTTCAGTTCGATTCTTGCAAGTAGTG
AAGAAGTGATGGCTTCGACTGCATGTAGAAATGGTATTGTATAGAAGGGA
CATTCGAAATCATCCTTTTTCAAATCTAGGCCTCATCCATCTCCCTCATT
GGGATCGACTGTTCGTCGCAGCATTTCCGCATCTTCTGTCGGAAATGACG
GAGGCCAGTTTCATTTGTTCTGTTTGATTTTTGTCTCAATAGTAACTTTT
AATGTCCCAAGCTGCTGATTTTTTGGTGCTTGTAGTGCCTGAAAGAGTTA
GAGTGGTAGTCAGATTGCAGCCTCGAAATGCAGAAGAGACTGTAACAGAT
GCCGATTTTGCTGATTGTGTCGCGCTGCAGACAGAGCTTAAGAGGTTGAA
ACTTCGAAAGAACAATTGGAACTCAGACACTTATGAATTCGATGAGGTTT
TTACTGAATCTGCATCATAGAAGCGTGTTTATGAAGTTGTTGCCAAGCCT
GTTGTGGAGGTCTTTTATGGTTGGTATAGTTGTTAATATTTTAACACCAT
TTTTCAATCCAGCAATATTTGCTTCATTAAGTTTTTTGTAGACACGACAT
TATTTTTTAGCTTCAAAATGGTAGCAATATTCCTTTTAGGATATATCATG
C
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