DR404624

Overview
NameDR404624
Unique NameDR404624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 363.999 bits (933), Expect = 4.674e-100
Identity = 191/228 (83.77%), Postives = 202/228 (88.60%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPADPISVVTAGPS 730
            VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV LIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPE N+S REALE+SSQQEYLKLKARYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD L +LQ KE  L+EAN+TLKQRLMEG  +N LQ   +A+D GYG +  Q QGD FFH LECEPTLQIGYQ  DPI+V  AGPS
Sbjct:    6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPS 231          
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 2.247e-94
Identity = 182/233 (78.11%), Postives = 201/233 (86.27%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREA--LELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGL-KPAQPQGDTFFHA--LECEPTLQIGYQPADPISVVTAGPS 730
            VELKR+ENKINRQVTFAKRRNGLLKKAYELSVLCDAEV LI+FSNRGKLYEFCS+SSMLKTLERYQKCNYGAPE NV+++EA  LELSSQQEYLKLKARYE+LQRSQRNL+GE+LGPL+SK+LE+LERQLD SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG        GD  F    +ECEPTLQIGY   DP SVVTAGPS
Sbjct:    6 VELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR-MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPS 237          
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.724e-86
Identity = 174/233 (74.68%), Postives = 193/233 (82.83%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDTFFHALECEPTLQIGYQPADPISVVTAGPS 730
            VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV LIIFSNRGKLYEFCSSSSML+TLERYQKCNYGAPEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGE+LGPL++KELESLERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ E+   YG    Q Q     FF  LECEP LQIGYQ       + AGPS
Sbjct:    6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPS 235          
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.252e-85
Identity = 171/235 (72.77%), Postives = 193/235 (82.13%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDT---FFHALECEPTLQIGYQPADPISVVTAGPS 730
            VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV LIIFSNRGKLYEFCSSSSM++TLERYQKCNYG PEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGE+LGPL++KELE LERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ ED    YG    Q Q ++   FF  LECEP LQ+GYQ       + AGPS
Sbjct:    6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPS 238          
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 3.630e-85
Identity = 157/175 (89.71%), Postives = 164/175 (93.71%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 571
            VELKRIE KINRQVTFAKRRNGLLKKAYELSVLCDAEV LIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPN+S REALE+SSQQEYLKLK RYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD LT+ Q KE  L+EAN+TLKQRLMEG Q+N
Sbjct:    6 VELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGSQLN 180          

HSP 2 Score: 29.261 bits (64), Expect = 3.630e-85
Identity = 15/31 (48.39%), Postives = 18/31 (58.06%), Query Frame = 3
Query:  591 VQKIVVMGLNQLNLRAIPSFTPWNVNPHCKL 683
            + K+  M   QL LRA+ SF  W VN  CKL
Sbjct:  186 MHKLWAMAGKQLKLRAMASFILWIVNLLCKL 216          
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.365e-82
Identity = 162/227 (71.37%), Postives = 182/227 (80.18%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPADPISVVTA 721
            VELK IENKINRQVTFAKRR  LLKKAYELSVLCDAEV LIIFSNRGKLYEFCSS+SMLKTLE+YQKCN+G+PE  + +RE    SSQQEYLKLK R EALQRSQRNLLGE+LGPL SKELE LERQLD SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R  E  Q N  Q+ +PS     GYG +PAQ  G+ F+H LECEPTLQIGY     ++  TA
Sbjct:    6 VELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQKCNFGSPESTIISRET--QSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATA 230          
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 5.953e-71
Identity = 145/220 (65.91%), Postives = 168/220 (76.36%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSA------EDCGYGLKPAQPQGDTFFHALECEPTLQIGY 688
            VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV LIIFSNRGKLYEFCSSS+MLKTL+RYQKC+YG+ E N    + LE +S +EYLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+RS +TQYMLD L++LQ+KEQ+L E N+ L  +L +   V +  +          ++  Y    AQ QG   +  LEC PTLQ+GY
Sbjct:    6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGGGGWEGGEQNVTYAHHQAQSQG--LYQPLECNPTLQMGY 222          
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.016e-70
Identity = 144/219 (65.75%), Postives = 168/219 (76.71%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAE-----DCGYGLKPAQPQGDTFFHALECEPTLQIGY 688
            VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCS+S+MLKTLERYQKC+YG+ E N    + LE +S +EYLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+R  +TQYMLD L++LQ KE +L +AN+ L  +L +   V    +    E     +  YG   A  QG   + +LEC+PTLQIGY
Sbjct:    6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGGGWEGGDQQNIAYGHPQAHSQG--LYQSLECDPTLQIGY 221          
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 1.915e-69
Identity = 146/226 (64.60%), Postives = 173/226 (76.55%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALEL-SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPSAEDCGYGLKPAQPQ----GDTFFHALEC--EPTLQIGYQPAD 700
            VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV LIIFSNRGKLYEFCS+ SM KTLE+YQKC+Y  PE  V  RE+ +L +S+ EYLKLKAR E LQR+QRNLLGE+L  L  KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E   V   Q+        GY  +P   Q    G+ FFH L+   EPTLQIGY PA+
Sbjct:    6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQVWEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY-PAE 230          
BLAST of DR404624 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 1.915e-69
Identity = 146/226 (64.60%), Postives = 173/226 (76.55%), Query Frame = 2
Query:   47 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVTLIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALEL-SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPSAEDCGYGLKPAQPQ----GDTFFHALEC--EPTLQIGYQPAD 700
            VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV LIIFSNRGKLYEFCS+ SM KTLE+YQKC+Y  PE  V  RE+ +L +S+ EYLKLKAR E LQR+QRNLLGE+L  L  KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E   V   Q+        GY  +P   Q    G+ FFH L+   EPTLQIGY PA+
Sbjct:    6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQVWEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY-PAE 230          
The following BLAST results are available for this feature:
BLAST of DR404624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
AGL9_PETHY4.674e-10083.77Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
MTF1_PEA2.247e-9478.11MADS-box transcription factor 1 OS=Pisum sativum G... [more]
SEP3_ARATH1.724e-8674.68Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
AGL9_SINAL3.252e-8572.77Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_SOLLC3.630e-8589.71Agamous-like MADS-box protein AGL9 homolog OS=Sola... [more]
AGL9_ARADE3.365e-8271.37Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
SEP1_ARATH5.953e-7165.91Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
SEP2_ARATH1.016e-7065.75Developmental protein SEPALLATA 2 OS=Arabidopsis t... [more]
MADS7_ORYSJ1.915e-6964.60MADS-box transcription factor 7 OS=Oryza sativa su... [more]
MADS7_ORYSI1.915e-6964.60MADS-box transcription factor 7 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243O21 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243O21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404624 ID=DR404624; Name=DR404624; organism=Citrus sinensis; type=EST; length=732bp
ACGGCCGGGGGAAGAAAGAAAGGAGANNNNAATGGGAAGGGGTAGGGTTG
AGTTGAAGAGGATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCAAAG
AGAAGAAATGGCCTATTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGA
TGCTGAGGTTACTCTCATCATTTTCTCCAATAGAGGAAAGCTGTACGAGT
TTTGCAGTAGTTCAAGCATGCTCAAAACGCTTGAGAGGTACCAGAAGTGC
AACTATGGAGCACCAGAACCGAATGTGTCCGCAAGGGAGGCCCTGGAGCT
AAGTAGCCAGCAAGAATATCTGAAGCTTAAAGCACGATATGAAGCCCTAC
AGAGATCCCAAAGGAATCTCCTTGGAGAAGAACTTGGCCCTCTAAACAGC
AAAGAGCTTGAGTCACTTGAAAGGCAGCTTGATATGTCATTGAAGCAGAT
CAGATCAACAAGAACTCAGTACATGCTGGATACCCTTACTGAACTGCAAC
ATAAGGAACAGTTGCTGAGCGAAGCAAATAAGACCCTCAAACAAAGGTTG
ATGGAGGGATACCAAGTGAACACACTTCAATTGAATCCTAGTGCAGAAGA
TTGTGGTTATGGGCTTAAACCAGCTCAACCTCAGGGCGATACCTTCTTTC
ACGCCTTGGAATGTGAACCCACATTGCAAATTGGATACCAGCCTGCGGAC
CCAATATCGGTTGTCACAGCAGGCCCGAGTCT
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