DR404580

Overview
NameDR404580
Unique NameDR404580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404580 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15
Identity = 53/148 (35.81%), Postives = 78/148 (52.70%), Query Frame = 3
Query:  348 SLYYNASEGEFPDS--VYGLYLCKFNVSFQSCQNCIVAAVNSVLQKCSGTKEAFIWYQVQECMVRFSDHSSSIMDTSAPLCMKIFQNTYNVTKSLAQSFN--------DVIAMPSLSSFRNATKRTNISNIIRLETFGQCIPVLSVDD 761
            SL+ NA+ GE  DS  VYG++LC+ +VS + C++C+  A N  LQ+C   K A IWY   ECMVR+S  + SI+            N  N+T++    FN        DV    +LSS + AT++ N +    + +  QC P L+  D
Sbjct:   66 SLFDNAAAGEENDSNRVYGVFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVIWY--DECMVRYS--NQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSRKFATEKANFTVFQTIYSLVQCTPDLTNQD 209          
BLAST of DR404580 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 47/144 (32.64%), Postives = 75/144 (52.08%), Query Frame = 3
Query:  357 YNASEGEFPDSVYGLYLCKFNVSFQSCQNCIVAAVNSVLQKCSGTKEAFIWYQVQECMVRFSDHSSSIMDTSAPLCMKIFQNTYNVTKSLAQSFNDVI---------AMPSLSSFRNATKRTNISNIIRLETFGQCIPVLSVDD 761
            ++ ++G+  D V+GLYLCK ++S +SC+ C++ A      +C G KE  I Y   ECM+ +SD  +  MDT     + I  NT  VT   +  FND +            + +S + A K+++ S+   L    QCIP L+ +D
Sbjct:   69 HSLTKGQNSDMVFGLYLCKGDLSPESCRECVIFAAKDTRSRCPGGKEFLIQY--DECMLGYSDR-NIFMDTVTTTTI-ITWNTQKVTADQSDRFNDAVLSLMKKSAEEAANSTSKKFAVKKSDFSSSQSLYASVQCIPDLTSED 208          
BLAST of DR404580 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.166e-12
Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 3
Query:  354 YYNASEGEFPDSVYGLYLCKFNVSFQSCQNCIVAAVNSVLQKCSGTKEAFIWYQVQECMVRFSDHSSSIMDTSAPLCMKIFQNTYNVTKSLAQSFNDVIAMPSL---------SSFRNATKRTNISNIIRLETFGQCIPVLSVDD 761
            + NA+ G+ PD V GL+ C+ +VS + C+ C+  AVN  L +C   KEA ++Y   EC++R+S  + +I+ T       I  NT NVT +     +D++ +P+L         SS +  T++ N + +       QC P L+  D
Sbjct:   67 FQNATVGQAPDRVTGLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYY--DECVLRYS--NQNILSTLITTGGVILVNTRNVTSNQLDLLSDLV-LPTLNQAATVALNSSKKFGTRKNNFTALQSFYGLVQCTPDLTRQD 206          
BLAST of DR404580 vs. ExPASy Swiss-Prot
Match: CRR9_ARATH (Cysteine-rich repeat secretory protein 9 OS=Arabidopsis thaliana GN=CRRSP9 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  354 YYNASEGEFPDSVYGLYLCKFNVSFQSCQNCIVAAVNSVLQKCSGTKEAFIWYQVQECMVRFSDHSSS----IMDTSAPLCMKIFQNTYNVTKSLAQSFNDVIAMPSLSSF-----RNATKRTNISNIIRLETFGQCIPVLSV 755
            Y NA+EG  PD+V+G++LC+ +++  SC +C+  A   +   C+  K A I+Y   ECMVR+S+ S S    I+ +     ++   N     ++L + F+++I   S SS       +  + T       L+T  QC P L +
Sbjct:   68 YSNATEGLSPDTVHGMFLCRGDITTASCVDCVQTATTEIASNCTLNKRAVIYY--DECMVRYSNVSFSSELEIVPSITIYSLRSAPNPTRFNQTLTEKFSELIFNVSSSSLVPYFVEDQERVTQSEGSYDLDTMVQCSPDLDI 208          
BLAST of DR404580 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 45/145 (31.03%), Postives = 75/145 (51.72%), Query Frame = 3
Query:  354 YYNASEGEFPDSVYGLYLCKFNVSFQSCQNCIVAAVNSVLQKCSGTKEAFIWYQVQECMVRFSDHS-SSIMDTSAPLCMKIFQNTYNVTKSLAQSFNDVIAMP--------SLSSFRNATKRTNISNIIRLETFGQCIPVLSVDD 761
            + NA+ G+ PD V GL+LC+ NVS + C++CI  +VN  L +C   +EA  +Y  ++CM+R+S+ +  S ++T   + M   QN  N        F D++  P        + S  R A  + +++ +  L    QC P L+  D
Sbjct:   67 FQNATAGQAPDMVTGLFLCRGNVSPEVCRSCIALSVNESLSRCPNEREAVFYY--EQCMLRYSNRNILSTLNTDGGVFM---QNARNPISVKQDRFRDLVLNPMNLAAIEAARSIKRFAVTKFDLNALQSLYGMVQCTPDLTEQD 206          
BLAST of DR404580 vs. ExPASy Swiss-Prot
Match: CRR4_ARATH (Cysteine-rich repeat secretory protein 4 OS=Arabidopsis thaliana GN=CRRSP4 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 3
Query:  309 ILFNQKLHSEAGKSLYYNASEGEFPDSVYGLYLCKFNVSFQSCQNCIVAAVNSVLQKCSGTKEAFIWYQVQECMVRFSDHSSSIMDTSAPLCMK----IFQNTYNVTKSLAQSFNDVI----AMPSLSS----FRNATKRTNISNIIRLETFGQCIPVL 749
            +L + +L S  G   Y NA+ G  PD+V G++LC+ ++S  SC +C+  A   + + C+  KEAFI+Y  +ECMVR+SD S   +    P  ++       N     ++L+   +++I    + PSLSS      +  +         +++  QC P L
Sbjct:   60 VLSSLRLRSSLGS--YSNATAGISPDTVRGMFLCRGDISETSCSDCVQTATLEISRNCTYQKEAFIFY--EECMVRYSDSSFFSLVDERPYIIRYSLSYAPNLDRFPQTLSDKMDELIINATSSPSLSSTPYFVEDQERVKQFEGSFDIDSMAQCSPDL 214          
BLAST of DR404580 vs. ExPASy Swiss-Prot
Match: CRR6_ARATH (Probable cysteine-rich repeat secretory protein 6 OS=Arabidopsis thaliana GN=CRRSP6 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 49/162 (30.25%), Postives = 77/162 (47.53%), Query Frame = 3
Query:  309 ILFNQKLHSEAGKSLYYNASEGEFPDSVYGLYLCKFNVSFQSCQNCIVAAVNSVLQKCSGTKEAFIWYQVQECMVRFSDHSSSIMDTSAPLCMKIFQNTYNVTKSLAQSFN-------DVIAMPSLSSFRNATKR--------TNISNIIRLETFGQCIPVL 749
            +L   + HS  G S Y+NA+ G  P++VYG++LC  N+S  SC NC+ +A   + + C     +F++    ECMVR+SD+S   +   +P     F  + N + S  Q +N       D + + + SSF +            T +     LE   QC P L
Sbjct:   44 VLSTLRNHSSLG-SYYFNATAGLSPNTVYGMFLCIGNISKTSCSNCVHSATLEMDKSCESHDTSFMF--SDECMVRYSDNSFFSLVEDSP---ATFSYSQNDSLSYPQFYNQTLPGKLDELILKAPSSFSSPVPYFVEDKEHVTQVEGSYDLEAMAQCSPDL 199          
The following BLAST results are available for this feature:
BLAST of DR404580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CRK25_ARATH8.515e-1535.81Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK5_ARATH2.319e-1232.64Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK10_ARATH5.166e-1231.72Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
CRR9_ARATH1.963e-1130.07Cysteine-rich repeat secretory protein 9 OS=Arabid... [more]
CRK20_ARATH1.963e-1131.03Putative cysteine-rich receptor-like protein kinas... [more]
CRR4_ARATH2.564e-1129.56Cysteine-rich repeat secretory protein 4 OS=Arabid... [more]
CRR6_ARATH7.460e-1130.25Probable cysteine-rich repeat secretory protein 6 ... [more]
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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243M16 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243M16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404580 ID=DR404580; Name=DR404580; organism=Citrus sinensis; type=EST; length=763bp
GGGGGTCCATATGTCTTGTCTCTTCAATGTTATTTTGTAACATAAGTTCC
CACCTTATCTTCAAAGATACCTTCGATCACCATATACAATTAACAATGGA
ACTTAATAGAGCATTCATTTCGGAGGTCAAAAGCTATAGAAGGACGATGC
CGACTGCCGCAAATTTAGCCTCACAAGCTATTCGCTGGCTTCACTTGCTT
TCTATTGTATCCTCTGTTATGTCACAGTATTTTGCTGAAGAAGACATGGT
TTTATCCTGCGCTGTATCCAACAACACCGCTTCCAACACGTTCACAAGCA
ACCTCAACATCCTCTTCAACCAGAAGCTTCACTCTGAAGCTGGCAAGTCC
CTCTATTACAATGCATCAGAAGGGGAATTTCCGGACTCAGTTTATGGTCT
TTATCTTTGTAAATTCAACGTTAGCTTCCAATCTTGTCAGAATTGTATAG
TTGCAGCAGTTAACTCCGTTTTGCAAAAATGTAGTGGCACCAAGGAGGCA
TTTATATGGTATCAAGTTCAAGAGTGCATGGTGCGATTTTCAGATCATTC
TTCATCCATCATGGATACTTCGGCGCCTCTGTGCATGAAGATATTTCAAA
ACACTTATAATGTCACCAAAAGTCTGGCTCAGTCCTTCAACGACGTAATT
GCCATGCCAAGTTTAAGTTCTTTCCGAAATGCAACCAAAAGGACTAACAT
TTCCAACATTATTAGACTTGAAACCTTTGGGCAGTGTATACCAGTGTTGT
CAGTAGATGACTG
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