DR404567

Overview
NameDR404567
Unique NameDR404567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.619e-67
Identity = 141/206 (68.45%), Postives = 150/206 (72.82%), Query Frame = 1
Query:   82 MESRVLSRAXXXXXX--ISSLRRSPLEDHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGE--AAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            MESRVLSRA        ++ L R PL    N S  S+K  G+V +GGN++WGRQLRP L        A L       LRP  ATA     G+DSAGE   APV FF RYPAL TGFFFF WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPID  LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH
Sbjct:    1 MESRVLSRATTLSSLPTLNKLHRLPLA---NASLPSVKSFGSVSDGGNLVWGRQLRPELCSPVLKKGASL-------LRPCPATAG----GNDSAGEEKVAPVGFFSRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 192          
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.375e-65
Identity = 131/204 (64.22%), Postives = 144/204 (70.59%), Query Frame = 1
Query:   82 MESRVLSRAXXXXXXISSLRRSPLEDHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            MESRVLS        I  L R               P      GGN++WGRQLRP+LL    ++P  L     K+++L+P  ATAS      DSAG+AAPV FF +YP LVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVS IHL VGVVYCL  WAVGLPKRAP+DS LLKLLIPVA CHALGHVTSNVSFAAVAVSFTH
Sbjct:    1 MESRVLSSGATTISGIPRLTRPAGRTTTTTVVAVASPAKLNTNGGNLVWGRQLRPSLLNLDHSSPVSLVTKPVKRDVLKPCTATAS------DSAGDAAPVGFFAKYPFLVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTH 198          
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.188e-64
Identity = 133/208 (63.94%), Postives = 152/208 (73.08%), Query Frame = 1
Query:   82 MESRVLSRAXXXXXXISSLRRSPLEDHQNVSFIS------LKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            MESRVL RA      +  LRR     ++  S  S       KPIG++GEGGN+I GRQLRP LLL+S          K+EIL+P+ A +   AEG DSAGE   V F  +YP LVTG    MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW+VGLPKRAP++S +LK+LIPVAVCHA+GHVTSNVSFAAVAVSFTH
Sbjct:    1 MESRVLLRATETVTGVPQLRRPIRAINRQFSTASSSFTAFAKPIGSIGEGGNLISGRQLRPLLLLDS-------LPEKREILKPVRAAS---AEGGDSAGETK-VGFLGKYPWLVTGILLLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTH 197          
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.365e-64
Identity = 129/204 (63.24%), Postives = 145/204 (71.08%), Query Frame = 1
Query:   82 MESRVLSRAXXXXXXISSLRRSPLEDHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            MESRVLS        +  L + P       +     P      GGNV+WGRQLRP+LL    ++P  L     K+++L+P  ATAS      DSAG+AAPV F  +YP LVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL SW VGLPKRAP+DS +LKLLIPV  CHALGHVTSNVSFAAVAVSFTH
Sbjct:    1 MESRVLSSGATAISGVPRLTK-PAGRITTTTVAVAFPARLNATGGNVVWGRQLRPSLLNLDHSSPVSLVTKPVKRDVLKPCSATAS------DSAGDAAPVGFLAKYPFLVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVSFAAVAVSFTH 197          
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.264e-61
Identity = 125/204 (61.27%), Postives = 142/204 (69.61%), Query Frame = 1
Query:   82 MESRVLSRAXXXXXXISSLRRSPLEDHQNVSFIS--LKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            MESRVLSR           R  P  +  +  F +    P+G V +GG++ WGRQLRP LLLE      G    ++E       TA  P   +  +   A   F ++YPALVTG FFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL SW+VGLPKRAP+DSKLLKLLIPVAVCHA+GHVTSNVSFAAVAVSFTH
Sbjct:    1 MESRVLSRTTAIAALPKLFR--PSREAASFGFATGVKTPVGLVKDGGSLTWGRQLRPVLLLEP--VQTGPVCSRRE------KTAVQPCRAASGSSGEAKTGFLEKYPALVTGSFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTH 194          
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.124e-60
Identity = 120/170 (70.59%), Postives = 135/170 (79.41%), Query Frame = 1
Query:  178 ISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            ++ KP+G +  G N+IWGRQLRPA+LLE+S         K+E ++P  A ASS A  SDS+G+A  V FF++   L TGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPIDS  LKLL PVA CHALGHVTSNVSFAAV VSFTH
Sbjct:   45 VTAKPVGPLIAGPNLIWGRQLRPAILLETSP--------KRESIKPCSAAASSSAGSSDSSGDAK-VGFFNK-ATLTTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTH 204          
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.242e-59
Identity = 111/169 (65.68%), Postives = 135/169 (79.88%), Query Frame = 1
Query:  181 SLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            ++K   AV +   ++WGRQLRPALLL ++  P+ L   ++  L+P       PA  ++SAGEA  V F ++YPALVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVS+IHL+VGVVYCL+SW+VGLPKRAPI+  LLKLL PVA+CH +GH+TSNVSFAAVAVSF H
Sbjct:   40 TVKCAAAVPDAAPIVWGRQLRPALLLPAALLPS-LQPARRHTLQP-------PAAAAESAGEAKSVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAH 200          
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 45/95 (47.37%), Postives = 60/95 (63.16%), Query Frame = 1
Query:  403 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            L  G +F  W+ LNV+FNI NK++ N +PYP+  S + L  G +  L+SWAVG+ +    D    K L PVAV H +GHV + VS + VAVSFTH
Sbjct:   95 LKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTH 189          
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 45/95 (47.37%), Postives = 58/95 (61.05%), Query Frame = 1
Query:  403 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            L  G +F  W+ LNV+FNI NK++ N FPYP+  S + L  G +  LVSWA  +      D +  K L PVAV H +GHV + VS + VAVSFTH
Sbjct:   95 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTH 189          
BLAST of DR404567 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16
Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 1
Query:  256 LESSNAPAGLFAGKKEILRPILAT------ASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 687
            L SS++P   ++G   +  P L T      A++  E  + +G+   V        L  G  F MWY  N+ FNI NK++      P  V+++   VG V     WA+ L KR  I +  L  ++P+AV H LG++ +N+S   V+VSFTH
Sbjct:   53 LASSDSPLRAWSGLPSVSSPSLDTNRFKTAATAVPEEGEGSGKMTKV--------LELGLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTH 194          
The following BLAST results are available for this feature:
BLAST of DR404567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
TPT_PEA1.619e-6768.45Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR3.375e-6564.22Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB2.188e-6463.94Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR6.365e-6463.24Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL2.264e-6161.27Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU1.124e-6070.59Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE1.242e-5965.68Triose phosphate/phosphate translocator, chloropla... [more]
GPT1_ARATH2.532e-2047.37Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
GPT2_ARATH2.144e-1947.37Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
TPT2_BRAOB4.942e-1633.33Triose phosphate/phosphate translocator, non-green... [more]
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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243L24 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243L24 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404567 ID=DR404567; Name=DR404567; organism=Citrus sinensis; type=EST; length=687bp
GGGGCTCTCTCGTTAAGAGCTCACACAGGCTACGAAAACCACATTTGTTT
CTCTCTCAAAAGTAGCCACAGCGGTGACACGATGGAGTCGCGAGTGCTGT
CACGCGCCACCACCACCACCACCACCATTTCAAGCCTCCGAAGATCGCCG
CTTGAGGACCACCAAAACGTCAGCTTCATCTCGTTGAAGCCGATTGGAGC
CGTTGGTGAAGGCGGGAATGTCATTTGGGGAAGACAGCTACGTCCTGCTC
TGCTCCTCGAGAGCTCCAATGCTCCGGCTGGTCTTTTCGCCGGAAAGAAG
GAGATTCTCCGTCCAATCCTCGCCACCGCTTCTTCTCCTGCCGAAGGAAG
CGATTCCGCCGGAGAAGCTGCTCCGGTCAGATTCTTTGACAGGTATCCGG
CCCTCGTGACCGGGTTCTTCTTCTTCATGTGGTACTTCCTGAACGTGATA
TTCAACATTCTTAACAAGAGGATTTACAATTACTTCCCATATCCTTATTT
TGTGTCCGTTATTCATTTGTTGGTTGGGGTGGTTTACTGTTTGGTGAGCT
GGGCTGTGGGCCTTCCCAAGCGAGCTCCTATTGATTCAAAACTCCTGAAG
CTCTTAATCCCTGTTGCTGTGTGTCATGCATTGGGCCATGTTACCAGCAA
CGTGTCTTTTGCAGCAGTTGCTGTCTCCTTTACCCAT
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