DR404550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404550 vs. ExPASy Swiss-Prot
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.109e-17 Identity = 47/139 (33.81%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 324 ASGYAAALLDKALCLSSLEAVQRDVLKLSRLLKNEQIQAVCADPFVGDKDKGQIVKELLSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKRVQNLCGAAQVKIRNLI 740 AS YA+AL D A +LEA DV KL R+ E + A+P + +K ++ E++++ + + A + +LI+ ++ +V ++L EF+ +++ + GT V V+S K+E D L IAK VQ + GA V+I+ +I Sbjct: 75 ASRYASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGVQKITGAKNVRIKTVI 213
BLAST of DR404550 vs. ExPASy Swiss-Prot
Match: ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 44/139 (31.65%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 324 ASGYAAALLDKALCLSSLEAVQRDVLKLSRLLKNEQIQAVCADPFVGDKDKGQIVKELLSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKRVQNLCGAAQVKIRNLI 740 A YA AL D A +LE D+ K+ ++ +E + P VG++ K ++V E++SS + ++A L +L++ +V ++ ++++EF+++Y+ L T + V+S K+E L IAK VQ L G+ V+I+ +I Sbjct: 66 AGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQIAKGVQRLTGSKNVRIKTVI 204
BLAST of DR404550 vs. ExPASy Swiss-Prot
Match: ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.355e-15 Identity = 45/139 (32.37%), Postives = 79/139 (56.83%), Query Frame = 3 Query: 324 ASGYAAALLDKALCLSSLEAVQRDVLKLSRLLKNEQIQAVCADPFVGDKDKGQIVKELLSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKRVQNLCGAAQVKIRNLI 740 A YAAAL D A ++L+A+ D K+ +L + ++ + P V D K Q++ E ++ + L +LI+ ++ M+ D+++EF+ +Y+ L T +V V+S K+E L IAK+VQ L GA +V+ + L+ Sbjct: 69 AGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTKRQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVVKLESHHLAQIAKQVQKLTGAKKVRTKTLL 207
BLAST of DR404550 vs. ExPASy Swiss-Prot
Match: ATPD_CHLRE (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.820e-13 Identity = 42/140 (30.00%), Postives = 82/140 (58.57%), Query Frame = 3 Query: 324 ASGYAAALLDKALCLSSLEAVQRDVLKLSRLLK-NEQIQAVCADPFVGDKDKGQIVKELLSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKRVQNLCGAAQVKIRNLI 740 + YA AL++ A LEAV DV ++ L+K N ++ A+ +P V K ++ ++ +Y L +L+E++++++V ++ E F+ +Y + T+V + SA K+E++Q F IAK++Q L G+ +K++ +I Sbjct: 39 SESYAKALVELADEKGKLEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEAGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAKKLQELTGSKNIKLKPVI 178 The following BLAST results are available for this feature:
BLAST of DR404550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR404550 ID=DR404550; Name=DR404550; organism=Citrus sinensis; type=EST; length=780bpback to top |