DR404454

Overview
NameDR404454
Unique NameDR404454
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404454 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 3
Query:  348 SLYYNASEGEFPDS--VYGLYLCKFNVSFQSCQNCIVAAVNSVLQKCSGTKEAFIWYQVQECMVRFSDHSSSIMDTSAPLCMKIFQNTYNVTKSLAQSFN--------DVIAMPSLSSFRNATKRTNIS 704
            SL+ NA+ GE  DS  VYG++LC+ +VS + C++C+  A N  LQ+C   K A IWY   ECMVR+S  + SI+            N  N+T++    FN        DV    +LSS + AT++ N +
Sbjct:   66 SLFDNAAAGEENDSNRVYGVFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVIWY--DECMVRYS--NQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSRKFATEKANFT 190          
BLAST of DR404454 vs. ExPASy Swiss-Prot
Match: CRR4_ARATH (Cysteine-rich repeat secretory protein 4 OS=Arabidopsis thaliana GN=CRRSP4 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11
Identity = 43/129 (33.33%), Postives = 71/129 (55.04%), Query Frame = 3
Query:  309 ILFNQKLHSEAGKSLYYNASEGEFPDSVYGLYLCKFNVSFQSCQNCIVAAVNSVLQKCSGTKEAFIWYQVQECMVRFSDHSSSIMDTSAPLCMK----IFQNTYNVTKSLAQSFNDVI----AMPSLSS 671
            +L + +L S  G   Y NA+ G  PD+V G++LC+ ++S  SC +C+  A   + + C+  KEAFI+Y  +ECMVR+SD S   +    P  ++       N     ++L+   +++I    + PSLSS
Sbjct:   60 VLSSLRLRSSLGS--YSNATAGISPDTVRGMFLCRGDISETSCSDCVQTATLEISRNCTYQKEAFIFY--EECMVRYSDSSFFSLVDERPYIIRYSLSYAPNLDRFPQTLSDKMDELIINATSSPSLSS 184          
The following BLAST results are available for this feature:
BLAST of DR404454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CRK25_ARATH5.663e-1337.21Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRR4_ARATH4.059e-1133.33Cysteine-rich repeat secretory protein 4 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243G04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404454 ID=DR404454; Name=DR404454; organism=Citrus sinensis; type=EST; length=733bp
GGGGGTCCATATGTCTTGCCTCTTCAATGTTATTTTGTAACATAAGTTCC
CANNNTATCTTCAAAGATACCTTCGATCACCATATACAATTAACAATGGA
ACTTAATAGAGCATTCATTTCGGAGGTCAAAAGCTATAGAAGGACGATGC
CGACTGCCGCAAATTTAGCCTCACAAGCTATTCGCTGGCTTCACTTGCTT
TCTATTGTATCCTCTGTTATGTCACAGTATTTTGCTGAAGAAGACATGGT
TTTATCCTGCGCTGTATCCAACAACACCGCTTCCAACACGTTCACAAGCA
ACCTCAACATCCTCTTCAACCAGAAGCTTCACTCTGAAGCTGGCAAGTCC
CTCTATTACAATGCATCAGAAGGGGAATTTCCGGACTCAGTTTATGGTCT
TTATCTTTGTAAATTCAACGTTAGCTTCCAATCTTGTCAGAATTGTATAG
TTGCAGCAGTTAACTCCGTTTTGCAAAAATGTAGTGGCACCAAGGAGGCA
TTTATATGGTATCAAGTTCAAGAGTGCATGGTGCGATTTTCAGATCATTC
TTCATCCATCATGGATACTTCGGCGCCTCTGTGCATGAAGATATTTCAAA
ACACTTATAATGTCACCAAAAGTCTGGCTCAGTCCTTCAACGACGTAATT
GCCATGCCAAGTTTAAGTTCTTTCCGAAATGCAACCAAAAGGACTAACAT
TTCCAACATTATTAGACTTGAAACCTNTGGGCA
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