CX070248

Overview
NameCX070248
Unique NameCX070248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX070248 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSJ (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica GN=Os08g0359500 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.386e-45
Identity = 93/135 (68.89%), Postives = 105/135 (77.78%), Query Frame = 1 
Query:   73 MSRVPEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYXXXXXXXXXXXXXXNGAGDLDLGGMDFSNFGGMGG 477
            MSR PEVKWAQR DKV+ITVQL DAK+AKVNLEPEGVFSFSA+AG + +LYE KLEL DKVNVEESKI+VGVRSIFCIVEKAE  WWKKL+R D K PH+              +   D+++ GMDFSNFGGMGG
Sbjct:    1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDKVNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHF--VKVDWDKWVDEDDDGADVNVDGMDFSNFGGMGG 133
[Close]
BLAST of CX070248 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSI (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 1.386e-45
Identity = 93/135 (68.89%), Postives = 105/135 (77.78%), Query Frame = 1 
Query:   73 MSRVPEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYXXXXXXXXXXXXXXNGAGDLDLGGMDFSNFGGMGG 477
            MSR PEVKWAQR DKV+ITVQL DAK+AKVNLEPEGVFSFSA+AG + +LYE KLEL DKVNVEESKI+VGVRSIFCIVEKAE  WWKKL+R D K PH+              +   D+++ GMDFSNFGGMGG
Sbjct:    1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDKVNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHF--VKVDWDKWVDEDDDGADVNVDGMDFSNFGGMGG 133
[Close]
BLAST of CX070248 vs. ExPASy Swiss-Prot
Match: Y3377_ARATH (Uncharacterized protein At3g03773 OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.395e-21
Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = 1 
Query:   73 MSRVPEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHY 372
            MSR PEV WAQR DKV++TV LPDAK+  V  EP+G+FSFSA  GA+   +E  LEL+ K+  E  K NVG+R+I   ++K E+ WW +LL+ + K   Y
Sbjct:    1 MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSA-LGAQGERFEFSLELYGKIMTEYRK-NVGLRNIIFSIQKEERSWWTRLLKSEEKPAPY 98
The following BLAST results are available for this feature:
BLAST of CX070248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y8359_ORYSJ1.386e-4568.89Uncharacterized protein Os08g0359500 OS=Oryza sati... [more]
Y8359_ORYSI1.386e-4568.89Uncharacterized protein OsI_027940 OS=Oryza sativa... [more]
Y3377_ARATH1.395e-2151.00Uncharacterized protein At3g03773 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_15F08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15F08-L15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070248 ID=CX070248; Name=CX070248; organism=Citrus sinensis; type=EST; length=483bp
CAAAACCGCAGGCTGTCGCAACTCTCTCTCTCGCTCTAGGGTTTTACTGT
TTTCTTTCCATTTCGAGACAATATGAGCCGTGTTCCTGAGGTGAAGTGGG
CCCAGAGGCAAGATAAGGTATTTATAACCGTGCAATTACCTGACGCAAAA
AATGCCAAGGTAAATCTTGAGCCAGAGGGAGTGTTCTCCTTCTCTGCTAG
TGCTGGTGCTGAAAACCACCTTTATGAGCTCAAGCTGGAGCTTTTTGATA
AGGTCAACGTGGAGGAAAGCAAAATTAATGTAGGTGTAAGGAGCATATTC
TGCATCGTGGAGAAGGCAGAAAAAGGATGGTGGAAGAAACTACTTCGTGG
AGATGGCAAGACACCACATTATGTCAAAGTTGATTGGGACAAATGGGTAG
ACGAAGACGAGGATAATGGTGCAGGTGACTTGGATCTTGGGGGGATGGAC
TTTTCGAATTTTGGTGGCATGGGAGGTGATGAT
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