CX070247

Overview
NameCX070247
Unique NameCX070247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX070247 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSJ (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica GN=Os08g0359500 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.488e-26
Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = -1 
Query:  620 AKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHY 838
            AKVNLEPEGVFSFSA+AG + +LYE KLEL DKVNVEESKI+VGVRSIFCIVEKAE  WWKKL+R D K PH+
Sbjct:   28 AKVNLEPEGVFSFSATAGTDGNLYESKLELNDKVNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHF 100
[Close]
BLAST of CX070247 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSI (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.488e-26
Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = -1 
Query:  620 AKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHY 838
            AKVNLEPEGVFSFSA+AG + +LYE KLEL DKVNVEESKI+VGVRSIFCIVEKAE  WWKKL+R D K PH+
Sbjct:   28 AKVNLEPEGVFSFSATAGTDGNLYESKLELNDKVNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHF 100
The following BLAST results are available for this feature:
BLAST of CX070247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y8359_ORYSJ1.488e-2679.45Uncharacterized protein Os08g0359500 OS=Oryza sati... [more]
Y8359_ORYSI1.488e-2679.45Uncharacterized protein OsI_027940 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_15F08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15F08-L15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070247 ID=CX070247; Name=CX070247; organism=Citrus sinensis; type=EST; length=838bp
TTTTTTTTTTTTTTAACTAAATAGTAAATTAAATTTGAAAGATAAATGCC
ACCATTAACAATGGCAGTTCTCTGTCTACAAGACAAACTGATGACTACTC
TCAACCACCAGATAAACGAGCTCACAAAGCTCACTTTCCAAATTATCTTC
CACGAAAAAGACAAACAATACAACATCCTAATCCAAGTTAAAAGAGTTCT
TTGGCTATATTGTCGCACCTATAAGAAATTTTTTAACTTCACTTGGTTAG
GCAAGAAAACACACGCATCAATCCTGTCACAACAACTGAAAAGATTTATC
CCATCCTGAAACTATAGCTCGAGCGAACTTGGCATTTGGAACAACCACAA
TATTATGTGCTTTGAGCAGCTTCTGTTTTCCCTTCAGTAATGCCAGCATC
ACTCTTGTCCTCACCTTCCTCTTCTTGATTAGTATCTCCTGCCTTGCGAA
CTTCTTGTTGCGGCTTTGACACTTCTTCATCATCACTGTCTTCAAAGCCA
CCCATACCATCATCACCTCCCATGCCACCAAAATTCGAAAAGTCCATCCC
CCCAAGATCCAAGTCACCTGCACCATTATCCTCGTCTTCGTCTACCCATT
TGTCCCAATCAACTTTGACATAATGTGGTGTCTTGCCATCTCCACGAAGT
AGTTTCTTCCACCATCCTTTTTCTGCCTTCTCCACGATGCAGAATATGCT
CCTTACACCTACATTAATTTTGCTTTCCTCCACGTTGACCTTATCAAAAA
GCTCCAGCTTGAGCTCATAAAGGTGGTTTTCAGCACCAGCACTAGCAGAG
AAGGAGAACACTCCCTCTGGCTCAAGATTTACCTTGGC
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