CX070224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND1_RAT (Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus GN=Cand1 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.687e-45 Identity = 95/204 (46.57%), Postives = 141/204 (69.12%), Query Frame = 2 Query: 2 KDQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLEDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNQISGGDCSMKFKSLMSEISKSPMLWEKFYTIRNE 613 +D D +VRR A++ ++ AHNKP+LI+ Y++T V+KELIR V++GPFKHTVDDGL++RKAAFEC+ TLLDSCLD+++ F+ +++ GL+DHYD+KM L+L +L+ CPSAVL LD LV+PL+ T K K ++VKQE ++ +++ RSA+RA+A+L I + S S+IS +P L F +I+ + Sbjct: 1016 EDPDLNVRRVALVTFNSAAHNKPSLIRDLLDSVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL-NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND1_PONAB (Cullin-associated NEDD8-dissociated protein 1 OS=Pongo abelii GN=CAND1 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.687e-45 Identity = 95/204 (46.57%), Postives = 141/204 (69.12%), Query Frame = 2 Query: 2 KDQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLEDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNQISGGDCSMKFKSLMSEISKSPMLWEKFYTIRNE 613 +D D +VRR A++ ++ AHNKP+LI+ Y++T V+KELIR V++GPFKHTVDDGL++RKAAFEC+ TLLDSCLD+++ F+ +++ GL+DHYD+KM L+L +L+ CPSAVL LD LV+PL+ T K K ++VKQE ++ +++ RSA+RA+A+L I + S S+IS +P L F +I+ + Sbjct: 1016 EDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL-NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND1_MOUSE (Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus GN=Cand1 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.687e-45 Identity = 95/204 (46.57%), Postives = 141/204 (69.12%), Query Frame = 2 Query: 2 KDQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLEDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNQISGGDCSMKFKSLMSEISKSPMLWEKFYTIRNE 613 +D D +VRR A++ ++ AHNKP+LI+ Y++T V+KELIR V++GPFKHTVDDGL++RKAAFEC+ TLLDSCLD+++ F+ +++ GL+DHYD+KM L+L +L+ CPSAVL LD LV+PL+ T K K ++VKQE ++ +++ RSA+RA+A+L I + S S+IS +P L F +I+ + Sbjct: 1016 EDPDLNVRRVALVTFNSAAHNKPSLIRDLLDSVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL-NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND1_HUMAN (Cullin-associated NEDD8-dissociated protein 1 OS=Homo sapiens GN=CAND1 PE=1 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.687e-45 Identity = 95/204 (46.57%), Postives = 141/204 (69.12%), Query Frame = 2 Query: 2 KDQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLEDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNQISGGDCSMKFKSLMSEISKSPMLWEKFYTIRNE 613 +D D +VRR A++ ++ AHNKP+LI+ Y++T V+KELIR V++GPFKHTVDDGL++RKAAFEC+ TLLDSCLD+++ F+ +++ GL+DHYD+KM L+L +L+ CPSAVL LD LV+PL+ T K K ++VKQE ++ +++ RSA+RA+A+L I + S S+IS +P L F +I+ + Sbjct: 1016 EDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL-NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND1_BOVIN (Cullin-associated NEDD8-dissociated protein 1 OS=Bos taurus GN=CAND1 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.687e-45 Identity = 95/204 (46.57%), Postives = 141/204 (69.12%), Query Frame = 2 Query: 2 KDQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLEDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNQISGGDCSMKFKSLMSEISKSPMLWEKFYTIRNE 613 +D D +VRR A++ ++ AHNKP+LI+ Y++T V+KELIR V++GPFKHTVDDGL++RKAAFEC+ TLLDSCLD+++ F+ +++ GL+DHYD+KM L+L +L+ CPSAVL LD LV+PL+ T K K ++VKQE ++ +++ RSA+RA+A+L I + S S+IS +P L F +I+ + Sbjct: 1016 EDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL-NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND1_DICDI (Cullin-associated NEDD8-dissociated protein 1 OS=Dictyostelium discoideum GN=cand1 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.079e-42 Identity = 91/204 (44.61%), Postives = 138/204 (67.65%), Query Frame = 2 Query: 5 DQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLED-HYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNQISGGDCSMKFKSLMSEISKSPMLWEKFYTIRNE 613 D D VRR+A+L+L+ AHNKPNLI+ Y+ +K ELIR VDLGPFKH VDDG+E+RK AFEC+ TLLD+ +D+++ + FIV L GL+D YD+K+ CHL++ +LA+ +A+L + L++PL+ + K + AVKQ+++RNE+ IRSALRA+AS+++I D +KF+ + ++ L +F +I +E Sbjct: 1023 DGDLIVRRSALLSLNYIAHNKPNLIRNDLSVYLPILYNNAKIKPELIREVDLGPFKHKVDDGIEIRKTAFECMYTLLDTSIDKIDVAPFIVS-LCDGLKDTQYDIKLLCHLMIIRLANSNGAALLENITLLLEPLRVILMTKVNETAVKQQIERNEECIRSALRAVASISRIPNSDSIVKFEEFVKNTIRTTPLAAQFNSILSE 1225
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND2_MOUSE (Cullin-associated NEDD8-dissociated protein 2 OS=Mus musculus GN=Cand2 PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 6.865e-39 Identity = 81/204 (39.71%), Postives = 134/204 (65.69%), Query Frame = 2 Query: 2 KDQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLEDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNQISGGDCSMKFKSLMSEISKSPMLWEKFYTIRNE 613 +D D +VRRA + ++ HNKP+L++ Y +T ++++LIR V++GPFKHTVDDGL++RKAAFEC+ +LL+SCL Q++ F+ +++ GL+DHYD++M ++L++LA CP+ VL +D L++PL+ T K K +VKQE+++ E++ RSA+RA+A+L S ++I +P L F +I+ + Sbjct: 1020 QDPDLNVRRATLTFFNSAVHNKPSLVRDLLDDILPLLYQETKIRRDLIREVEMGPFKHTVDDGLDVRKAAFECMYSLLESCLGQLDMCEFL-NHVEDGLKDHYDIRMLTFIMLARLATLCPAPVLQRVDRLIEPLRATCTAKVKAGSVKQELEKQEELKRSAMRAVAALLTNPEVRKSPTVADFSAQIRSNPELTTLFESIQKD 1222
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND2_HUMAN (Cullin-associated NEDD8-dissociated protein 2 OS=Homo sapiens GN=CAND2 PE=1 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 6.865e-39 Identity = 81/204 (39.71%), Postives = 134/204 (65.69%), Query Frame = 2 Query: 2 KDQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLEDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNQISGGDCSMKFKSLMSEISKSPMLWEKFYTIRNE 613 +D D +VRRA + ++ HNKP+L++ Y +T ++++LIR V++GPFKHTVDDGL++RKAAFEC+ +LL+SCL Q++ F+ +++ GL+DHYD++M +++++LA CP+ VL +D L++PL+ T K K +VKQE ++ +++ RSA+RA+A+L I S S+I +P L F +I+ + Sbjct: 1021 QDPDLNVRRATLAFFNSAVHNKPSLVRDLLDDILPLLYQETKIRRDLIREVEMGPFKHTVDDGLDVRKAAFECMYSLLESCLGQLDICEFL-NHVEDGLKDHYDIRMLTFIMVARLATLCPAPVLQRVDRLIEPLRATCTAKVKAGSVKQEFEKQDELKRSAMRAVAALLTIPEVGKSPIMADFSSQIRSNPELAALFESIQKD 1223
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND2_RAT (Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus GN=Cand2 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.997e-38 Identity = 80/204 (39.22%), Postives = 134/204 (65.69%), Query Frame = 2 Query: 2 KDQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLEDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNQISGGDCSMKFKSLMSEISKSPMLWEKFYTIRNE 613 +D D +VRRA + ++ HNKP+L++ Y +T ++++LIR V++GPFKHTVDDGL++RKAAFEC+ +LL+SCL Q++ F+ +++ GL+DHYD++M ++L++LA CP+ VL +D L++PL+ T K K +VKQE+++ +++ RSA+RA+A+L S ++I +P L F +I+ + Sbjct: 1058 QDPDLNVRRATLTFFNSAVHNKPSLVRDLLDDILPLLYQETKIRRDLIREVEMGPFKHTVDDGLDVRKAAFECMYSLLESCLGQLDICEFL-NHVEDGLKDHYDIRMLTFIMLARLAALCPAPVLQRVDRLIEPLRATCTAKVKAGSVKQELEKQDELKRSAMRAVAALMTNPEVRKSPSVADFSTQIRSNPELATLFESIQKD 1260
BLAST of CX070224 vs. ExPASy Swiss-Prot
Match: CAND1_SCHPO (Cullin-associated NEDD8-dissociated protein 1 OS=Schizosaccharomyces pombe GN=knd1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 48/201 (23.88%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 2 KDQDRHVRRAAVLALSTFAHNKPNLIKGXXXXXXXXXYDQTIVKKELIRTVDLGPFKHTVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLEDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASL-------------NQISGGDCSMKFKSLMSEI 565 ++ D V + + + + N+ + I ++ V + V +GPF+H VD+ + R+ FE + +LLD + +N + + GLED + +K+ IL KL D PS + +D++++ L+K I + + +K + D D++RSALR + ++ +Q+ G S++++ + +EI Sbjct: 1015 QNPDLEVSQETLQVIISVIKNRRSCIADVYNELLQGLISKSSVDSSNVHVVQMGPFQHVVDNSINQRQLVFETLYSLLD-IPESLNHLTHFLQVSVMGLEDEHYIKLVSLSILEKLVDCSPSIIDEQVDTILEALRKIIELRKTEKTLKTDSDNILDLVRSALRVLFTMKLKCDNPVISEFESQVQKGPYSLEYEGIKNEI 1214 The following BLAST results are available for this feature:
BLAST of CX070224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070224 ID=CX070224; Name=CX070224; organism=Citrus sinensis; type=EST; length=792bpback to top |