CX070222

Overview
NameCX070222
Unique NameCX070222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length424
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070222 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.040e-12
Identity = 32/44 (72.73%), Postives = 36/44 (81.82%), Query Frame = 2
Query:    2 SSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPD 133
            +SLH+INEEPTCP PF+FDFEQ S  EE IKELI RE L F+PD
Sbjct:  330 ASLHDINEEPTCPAPFSFDFEQPSFTEEHIKELIWRESLAFNPD 373          
BLAST of CX070222 vs. ExPASy Swiss-Prot
Match: MPK13_ARATH (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana GN=MPK13 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.891e-12
Identity = 29/41 (70.73%), Postives = 38/41 (92.68%), Query Frame = 2
Query:    2 SSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 124
            +SLHEINEEPTCP PF+FDFE+T+++E+DIKEL+ RE L+F
Sbjct:  320 ASLHEINEEPTCPTPFSFDFEETALDEQDIKELVWRESLHF 360          
BLAST of CX070222 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.176e-11
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 2
Query:    5 SLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDHM 139
            SLHEINEEP C  PFNFDFEQ S++E+DIKELI  E L F P+ M
Sbjct:  326 SLHEINEEPVCDSPFNFDFEQASLSEDDIKELIWNEALKFDPNTM 370          
BLAST of CX070222 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.619e-11
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 2
Query:    2 SSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPD 133
            +SLHEI +EP CP PF+FDFEQ S+ EEDIKE+I RE L F+P+
Sbjct:  348 ASLHEIYDEPVCPAPFSFDFEQPSLTEEDIKEIIWREALKFNPE 391          
The following BLAST results are available for this feature:
BLAST of CX070222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MPK6_ORYSJ4.040e-1272.73Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]
MPK13_ARATH6.891e-1270.73Mitogen-activated protein kinase 13 OS=Arabidopsis... [more]
NTF6_TOBAC1.176e-1168.89Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
MPK2_ORYSJ2.619e-1165.91Mitogen-activated protein kinase 2 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_15E06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15E06-J11-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070222 ID=CX070222; Name=CX070222; organism=Citrus sinensis; type=EST; length=424bp
ATCAAGTCTTCATGAGATCAATGAGGAGCCTACCTGTCCGTATCCTTTCA
ACTTTGATTTTGAACAGACATCCATGAATGAAGAAGATATAAAGGAGCTC
ATATTGAGAGAGTGTTTGAACTTCCACCCAGATCACATGCTCGAGTAATC
TTTGACCTTTGTTTCCGTTGATCGGTTCATTGGAGTGATGTCAAGGTTGA
TTATGGTTTGCAAAGCTAGCATGTATGTCGTATGCAATTAGGGAACTCTG
CATAAGCAGAAAATTTGGGAGATAGGTTCTCCCTTCTGATTTTAGTAGGG
TGGAATGGCTTTATGGCAGTTTATCATATAATACAAGTTACCGGATTAGT
TAATTTCAACAGTGAAGTTCCCAGTTGGGGTTTGTAATTTGGGACTTATA
AAAGAAGGCCGTTTGCTCCTAAAA
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