CX070221

Overview
NameCX070221
Unique NameCX070221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070221 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.152e-12
Identity = 32/44 (72.73%), Postives = 36/44 (81.82%), Query Frame = -2
Query:  293 SSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPD 424
            +SLH+INEEPTCP PF+FDFEQ S  EE IKELI RE L F+PD
Sbjct:  330 ASLHDINEEPTCPAPFSFDFEQPSFTEEHIKELIWRESLAFNPD 373          
BLAST of CX070221 vs. ExPASy Swiss-Prot
Match: MPK13_ARATH (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana GN=MPK13 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 7.083e-12
Identity = 29/41 (70.73%), Postives = 38/41 (92.68%), Query Frame = -2
Query:  302 SSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 424
            +SLHEINEEPTCP PF+FDFE+T+++E+DIKEL+ RE L+F
Sbjct:  320 ASLHEINEEPTCPTPFSFDFEETALDEQDIKELVWRESLHF 360          
BLAST of CX070221 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.208e-11
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = -2
Query:  287 SLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDHM 421
            SLHEINEEP C  PFNFDFEQ S++E+DIKELI  E L F P+ M
Sbjct:  326 SLHEINEEPVCDSPFNFDFEQASLSEDDIKELIWNEALKFDPNTM 370          
BLAST of CX070221 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.692e-11
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = -2
Query:  293 SSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPD 424
            +SLHEI +EP CP PF+FDFEQ S+ EEDIKE+I RE L F+P+
Sbjct:  348 ASLHEIYDEPVCPAPFSFDFEQPSLTEEDIKEIIWREALKFNPE 391          
The following BLAST results are available for this feature:
BLAST of CX070221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MPK6_ORYSJ4.152e-1272.73Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]
MPK13_ARATH7.083e-1270.73Mitogen-activated protein kinase 13 OS=Arabidopsis... [more]
NTF6_TOBAC1.208e-1168.89Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
MPK2_ORYSJ2.692e-1165.91Mitogen-activated protein kinase 2 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_15E06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15E06-J11-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070221 ID=CX070221; Name=CX070221; organism=Citrus sinensis; type=EST; length=428bp
TTTTTAGGAGCAAACGGCCTTCTTTTATAAGTCCCAAATTACAAACCCCA
ACTGGGAACTTCACTGTTGAAATTAACTAATCCGGTAACTTGTATTATAT
GATAAACTGCCATAAAGCCATTCCACCCTACTAAAATCAGAAGGGAGAAC
CTATCTCCCAAATTTTCTGCTTATGCAGAGTTCCCTAATTGCATACGACA
TACATGCTAGCTTTGCAAACCATAATCAACCTTGACATCACTCCAATGAA
CCGATCAACGGAAACAAAGGTCAAAGATTACTCGAGCATGTGATCTGGGT
GGAAGTTCAAACACTCTCTCAATATGAGCTCCTTTATATCTTCTTCATTC
ATGGATGTCTGTTCAAAATCAAAGTTGAAAGGATACGGACAGGTAGGCTC
CTCATTGATCTCATGAAGACTTGATCCT
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