CX070216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_ARATH (Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2) HSP 1 Score: 416.772 bits (1070), Expect = 6.941e-116 Identity = 202/233 (86.70%), Postives = 218/233 (93.56%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRLTNLI 700 LREFA NLK++SIADLIRYRRKRDKLV+R+SAARIPTMWGPFTAYCYRSILDGIEHIAMVKG+IGDGQDILVRVHSECLTGDIFGSARCDCG+QLAL+MQQIEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD GRDTVEANEELGLPVDSREYGIGAQ++RDLGVRTMKLMTNNP+KYVGLKGYGLA+ GRVPL++ I KENKRYLETKR KMGH+YGL+ G + I Sbjct: 305 LREFAAENNLKVVSIADLIRYRRKRDKLVERASAARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLITKENKRYLETKRTKMGHMYGLKFKGDVVEKI 537
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_NOCFA (Riboflavin biosynthesis protein ribBA OS=Nocardia farcinica GN=ribBA PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 7.503e-78 Identity = 140/225 (62.22%), Postives = 177/225 (78.67%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH-IYGLE 673 LR FA +L +ISIAD+I +RRK +K V R + ARIPT G FTA Y+SI D +EH+A+V+GDIGDG+D+LVRVHSECLTGD+FGS RCDCG QL A++ ++ GRGV++Y+RGHEGRGIGL HKL+AY LQD GRDTV+AN +LGLP D+R+YG GAQ+L DLG+R+M+L+TNNP+K VGL GYGL + RVP+ EN RYL TKR +MGH + GL+ Sbjct: 181 LRVFADDHDLALISIADMIAWRRKHEKQVVRVAEARIPTAHGAFTAVGYQSIYDDVEHVALVRGDIGDGEDVLVRVHSECLTGDVFGSLRCDCGPQLDAALEMVDQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDSGRDTVDANLDLGLPADARDYGTGAQILVDLGIRSMRLLTNNPAKRVGLDGYGLTITERVPMPLRANAENLRYLRTKRDRMGHDLVGLD 405
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCA9 (Riboflavin biosynthesis protein ribBA OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ribBA PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 7.764e-75 Identity = 138/223 (61.88%), Postives = 168/223 (75.34%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 LR FA NL ++SIADLI +RRK +K V R + ARIPT G F A Y SI D +EH+A+V GDI GDG D+LVRVHSECLTGD+FGS RCDCG QL AM+ + GRG+++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YG+GAQ+L DLGV++M+L+TNNP+K VGL GYGL + RVPL EN RYL TKR +MGH Sbjct: 181 LRVFADEHNLALVSIADLIEWRRKHEKHVQRIAEARIPTQHGEFRAVGYTSIYDDVEHVALVLGDISGPDGDGNDVLVRVHSECLTGDVFGSRRCDCGPQLDAAMEMVAKEGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGEDTVDANLKLGLPADARDYGLGAQILVDLGVKSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANSENIRYLRTKRDRMGH 403
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_RHOSR (Riboflavin biosynthesis protein ribBA OS=Rhodococcus sp. (strain RHA1) GN=ribBA PE=3 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.324e-74 Identity = 140/229 (61.14%), Postives = 173/229 (75.55%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH-IYGLE 673 LR FA NL +ISIADLI +RRK +K V+R ++ARIPT G FTA YRSI D +EH+A+V+GD+ GDG D+LVRVHSECLTGD+FGS RCDCG QL A+ + GRGV++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN ELGLP D+R+YGIGAQ+L DLG+ +M+L+TNNP+K VGL GYGL + RV + EN YL TKR +MGH + GL+ Sbjct: 181 LRVFADDHNLALISIADLIAWRRKHEKHVERVASARIPTRHGEFTAVGYRSIYDDVEHVALVRGDLPGPDGDGSDVLVRVHSECLTGDVFGSLRCDCGPQLDAALDMVAQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDAGSDTVDANLELGLPADARDYGIGAQILVDLGISSMRLLTNNPAKRVGLDGYGLQITERVSMPLRANAENLTYLRTKRDRMGHDLIGLD 409
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_SALAI (Riboflavin biosynthesis protein ribBA OS=Salinispora arenicola (strain CNS-205) GN=ribBA PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.259e-74 Identity = 134/220 (60.91%), Postives = 168/220 (76.36%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L F +L +I+IADL+ YRR+ +K V+ + AR+PT G F A+ YRS D EH+A+V GD+GDG+D+LVRVHSECLTGD+ GS RCDCG QL A+ Q+ GRGV++Y+RGHEGRGIGL HKL+AY LQD GRDTV+AN +LGLP D+R+YG GAQ+L DLGVR+M+L+TNNP+K GL+GYGL VAGRV L EN RYL TKR +MGH+ Sbjct: 179 LERFCAEHSLVLITIADLVAYRRRTEKQVELVAEARMPTRHGVFRAFGYRSDYDSAEHVALVMGDLGDGRDVLVRVHSECLTGDVLGSLRCDCGPQLNAALDQVAREGRGVVLYVRGHEGRGIGLLHKLQAYQLQDTGRDTVDANLDLGLPADARDYGTGAQILYDLGVRSMRLLTNNPAKRAGLEGYGLTVAGRVELPVRPHPENVRYLRTKRDRMGHL 398
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_RHOE4 (Riboflavin biosynthesis protein ribBA OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ribBA PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.259e-74 Identity = 141/229 (61.57%), Postives = 171/229 (74.67%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH-IYGLE 673 LR FA NL +ISIADLI +RRK +K V R + ARIPT G FTA Y SI D +EH+A+V+GDI GDG D+LVRVHSECLTGD+FGS RCDCG QL A+ + GRGV++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN ELGLP D+R+YGIGAQ+L DLG+ +M+L+TNNP+K VGL GYGL + RVP+ EN YL TKR +MGH + GL+ Sbjct: 181 LRVFADEHNLALISIADLIAWRRKHEKHVLRIAEARIPTRHGEFTAVGYTSIYDEVEHVALVRGDIAGPDGDGSDVLVRVHSECLTGDVFGSLRCDCGPQLDAALDMVAQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDAGSDTVDANLELGLPADARDYGIGAQILVDLGISSMRLLTNNPAKRVGLDGYGLQITDRVPMPLRANAENLTYLRTKRDRMGHDLIGLD 409
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_SALTO (Riboflavin biosynthesis protein ribBA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ribBA PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.853e-74 Identity = 134/222 (60.36%), Postives = 166/222 (74.77%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYG 667 L F +L +++IADL+ YRR+ +K V+ + AR+PT G F YR D EH+A+V GD+GDG+D+LVR HSECLTGD+FGS RCDCG QL AM+ + GRGV++Y+RGHEGRGIGL HKLRAY LQD GRDTVEAN ELGLPVD+R+YG GAQ+L DLGVR+M+L+TNNP+K GL+GYGL V RV L EN+RYL TKR +MGH+ G Sbjct: 179 LERFCAEHSLVLVTIADLVMYRRRTEKQVELVAEARLPTRHGDFRVAGYRGDYDSAEHVALVMGDLGDGRDVLVRAHSECLTGDVFGSLRCDCGLQLDTAMELVAKEGRGVVLYIRGHEGRGIGLLHKLRAYQLQDKGRDTVEANLELGLPVDARDYGTGAQVLYDLGVRSMRLLTNNPAKRAGLEGYGLTVTERVALPVQSHPENERYLRTKRDRMGHLLG 400
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_SYNWW (Riboflavin biosynthesis protein ribBA OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=ribBA PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.464e-73 Identity = 138/220 (62.73%), Postives = 170/220 (77.27%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L EFA++ NLK+ SIADLI YRR+++KLV R + A++PTM+G F A Y S+LD HIA+VKG+ + + ILVRVHSECLTGD+FGS RCDCG+QL AM I + G+GVL+Y+R EGRGIGL +K++AY LQD+GRDTVEAN ELG P D R+YGIGAQ+L DLGVR M+LMTNNP K GL+GYGL V RV + P K EN RYL TK+ KMGH+ Sbjct: 176 LLEFARQHNLKLASIADLIEYRRRKEKLVVRVTDAQLPTMYGDFVAVAYESLLDNKGHIALVKGEWEEDEPILVRVHSECLTGDVFGSRRCDCGEQLETAMSMIASEGKGVLLYMR-QEGRGIGLLNKIKAYKLQDNGRDTVEANLELGFPADLRDYGIGAQILVDLGVRKMRLMTNNPKKIRGLEGYGLEVVERVAIEMPHKPENTRYLRTKKEKMGHL 394
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCGI (Riboflavin biosynthesis protein ribBA OS=Mycobacterium gilvum (strain PYR-GCK) GN=ribBA PE=3 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 5.564e-73 Identity = 139/229 (60.70%), Postives = 171/229 (74.67%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH-IYGLE 673 LR FA +L +ISIADLI +RRK +K + R + ARIPT G F A Y SI + +EH+A+VKGDI GDG D+LVRVHSECLTGD+FGS RCDCG QL A+ + GRG+++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YG GAQ+L DLGVR+M+L+TNNP+K VGL GYGL + RVPL EN RYL TKR +MGH + GL+ Sbjct: 181 LRIFADEHDLALISIADLIEWRRKHEKHIARVAEARIPTRHGEFRAVGYTSIYEDVEHVALVKGDIAGPHGDGHDVLVRVHSECLTGDVFGSRRCDCGPQLDAALAMVAREGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGDDTVDANLKLGLPADARDYGTGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDRMGHDLVGLD 409
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCPA (Riboflavin biosynthesis protein ribBA OS=Mycobacterium paratuberculosis GN=ribBA PE=3 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 7.267e-73 Identity = 136/223 (60.99%), Postives = 168/223 (75.34%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIG----DGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 LR FA +L +I+IADLI +RRK +K ++R + ARIPT G F A Y SI + +EH+A+V+G+I DG D+LVRVHSECLTGD+FGS RCDCG QL AM + GRG+++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YGIGAQ+L DLGVR+M+L+TNNP+K VGL GYGL + RVPL EN RYL TKR KMGH Sbjct: 181 LRVFADEHDLAMITIADLIEWRRKHEKHIERIAEARIPTRHGEFRAIGYTSIYEEVEHVALVRGEIAGPNSDGDDVLVRVHSECLTGDVFGSRRCDCGPQLDAAMAMVAREGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGEDTVDANLKLGLPADARDYGIGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRTNAENIRYLMTKRDKMGH 403 The following BLAST results are available for this feature:
BLAST of CX070216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070216 ID=CX070216; Name=CX070216; organism=Citrus sinensis; type=EST; length=790bpback to top |