CX070213

Overview
NameCX070213
Unique NameCX070213
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.789e-40
Identity = 86/146 (58.90%), Postives = 108/146 (73.97%), Query Frame = -3
Query:  388 VVITKQEMEFEADKSSKQPETLNAVHIISLSEGFDLSPXXXXXXXXXXXXXXXATTRPASSVISRFEEVAKAV-KFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMST 822
            +  T+++++F   KS ++ ETLNA HII+LSEGFDLSP               AT+RPASSVIS  EE A+   KF+V+ SESRVR++G+++GRKGKLA+ A+IFAV PS +VVEVKKD+GDTLEYN FCS  LRPALKDI W ST
Sbjct:  294 ITTTEEDVDFLVHKSKEETETLNAFHIIALSEGFDLSPLFEEKKKEEKREMRFATSRPASSVISSLEEAARVGNKFDVRKSESRVRIEGKQNGRKGKLAVEAEIFAVAPSFVVVEVKKDHGDTLEYNNFCSTALRPALKDIFWTST 439          
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPK6_ORYSJ (CBL-interacting protein kinase 6 OS=Oryza sativa subsp. japonica GN=CIPK6 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.088e-29
Identity = 80/156 (51.28%), Postives = 96/156 (61.54%), Query Frame = -3
Query:  382 LPKVVITKQEMEFEADKSSKQPETLNAVHIISLSEGFDLSPXXXXXXXXXXXXXXXA--TTRPASSVISRFEEVAKAVKFNVKTSESR---VRLQGQE-SGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTAD 831
            LP         + EA+K   +PETLNA H+ISLSEGFDLSP                  T  PAS VISR E VA      ++ ++S    VRL+G E  G KG+LA+ ADIF+V PS+LVV+VKKD GDTLEY  FCS ELRPAL+DIVW + AD
Sbjct:  291 LPPAFADPAPAKEEAEKD--EPETLNAFHLISLSEGFDLSPLFEGDSAKGRRDGGMLFATREPASGVISRLEGVAARGGGRMRVTKSGARGVRLEGAERGGAKGRLAVAADIFSVAPSVLVVDVKKDGGDTLEYRSFCSEELRPALQDIVWGAAAD 444          
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.420e-29
Identity = 67/137 (48.91%), Postives = 92/137 (67.15%), Query Frame = -3
Query:  370 SSKQPETLNAVHIISLSEGFDLSPXXXXXXXXXXXXXXXATTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNPTL 780
            SS +P +LNA  IISLS+GFDLS                 T +PAS+++S+ E++A+   F VK  +  V+LQG + GRKG+LAI+A+IF VTPS  VVEVKK  GDTLEY +FC+  LRP+L+DI W   +++P+L
Sbjct:  308 SSLKPVSLNAFDIISLSKGFDLS-GLFENDKEQKADSRFMTQKPASAIVSKLEQIAETESFKVKKQDGLVKLQGSKEGRKGQLAIDAEIFEVTPSFFVVEVKKSAGDTLEYEKFCNKGLRPSLRDICWDGQSEHPSL 443          
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPKK_ORYSJ (CBL-interacting protein kinase 20 OS=Oryza sativa subsp. japonica GN=CIPK20 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/138 (47.10%), Postives = 86/138 (62.32%), Query Frame = -3
Query:  385 QPETLNAVHIISLSEGFDLSPXXXXXXXXXXXXXXXATT-RPASSVISRFEEVAKAVKFNVKTSESR--------VRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTA 771
            +P +LNA  IISLS+GFDLS                  T +PA++++SR EE+A+   F VK  + +        V+LQG + GRKG+LAI+A+IF V+PS  VVEVKK  GDTLEY  FC+ +LRP+L DI W S A
Sbjct:  306 KPASLNAFDIISLSQGFDLSGMFCCHGHSSRTQDQLFVTGKPATAIVSRLEEIAETEHFTVKKKQKKRQEEDGMAVKLQGWKEGRKGQLAIDAEIFEVSPSCYVVEVKKTAGDTLEYQAFCNRDLRPSLNDICWTSPA 443          
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.426e-23
Identity = 61/145 (42.07%), Postives = 81/145 (55.86%), Query Frame = -3
Query:  337 QPETLNAVHIISLSEGFDLSPXXXXXXXXXXXXXXXATTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNPTLGLNLEEQQI*N 771
            +P +LNA  IIS S+GFDLS                 +  P S +IS+ EE+AK V F V+  + RV L+G   G KG L I A+IF +TPSL+VVEVKK  GD  EY  FC+NEL+P L+++        P     ++E  I N
Sbjct:  337 RPASLNAFDIISFSQGFDLS----GLFDDDGEGSRFVSGAPVSKIISKLEEIAKVVSFTVRKKDCRVSLEGSRQGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKTEYEDFCNNELKPKLQNLTADDVVAEPVAVSAVDETAIPN 477          
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.549e-23
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = -3
Query:  397 LNAVHIISLSEGFDLSPXXXXXXXXXXXXXXXATTRPASSVISRFEEVAKAVKFNVKTSESRV-RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVW 759
            LNA  IISLSEGFDLS                 +++ AS++IS+ E+VA   K  VK  E  V +++G   GRKG LAI+A+IF VTPS  +VE+KK+NGDTLEY      +++PALKDIVW
Sbjct:  321 LNAFDIISLSEGFDLS--GLFEETDKKKEARFTSSQSASAIISKLEDVASCSKLTVKKKEGGVLKMEGASEGRKGVLAIDAEIFEVTPSFHLVEIKKNNGDTLEYQHLWKEDMKPALKDIVW 440          
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPKI_ARATH (CBL-interacting serine/threonine-protein kinase 18 OS=Arabidopsis thaliana GN=CIPK18 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23
Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = -3
Query:  400 ITKQEMEFEADK----SSKQPETLNAVHIISLSEGFDLSPXXXXXXXXXXXXXXXATTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIV 816
            +++ + EF+  +    S  +P +LNA  IIS S GFDLS                 +  P S +IS+ EE+AK V F V+  E  +RL+G   G KG L I A+IF +TPSL+VVEVKK  GD  EY +FC+ ELRP L+ ++
Sbjct:  364 VSESDAEFDVKRMGIGSMPRPSSLNAFDIISFSSGFDLS---GLFEEEGGEGTRFVSGAPVSKIISKLEEIAKIVSFTVRKKEWSLRLEGCREGAKGPLTIAAEIFELTPSLVVVEVKKKGGDREEYEEFCNKELRPELEKLI 503          
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.747e-22
Identity = 57/134 (42.54%), Postives = 82/134 (61.19%), Query Frame = -3
Query:  376 KQPETLNAVHIISLSEGFDLSPXXXXXXXXXXXXXXXATTRPASSVISRFEEVAKAVKFNV-KTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNP 774
            K+P  LNA  IISLS G DLS                 +T  AS++IS+ E++AK ++  + K     ++++G + GRKG + I+A+IF VTP+  +VE+KK NGDTLEY +  + E+RPALKDIVW    + P
Sbjct:  305 KKPSNLNAFDIISLSTGLDLS---GMFEESDKKESKFTSTSTASTIISKIEDIAKGLRLKLTKKDGGLLKMEGSKPGRKGVMGIDAEIFEVTPNFHLVELKKTNGDTLEYRKVLNQEMRPALKDIVWAWQGEQP 435          
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.347e-22
Identity = 59/135 (43.70%), Postives = 82/135 (60.74%), Query Frame = -3
Query:  379 SKQPETLNAVHIIS-LSEGFDLSPXXXXXXXXXXXXXXXATTRPASSVISRFEEVA-KAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADN 777
            S +P + NA  +IS LS+GFDLS                 T + A  ++S+FEE+A  + +FN+  S+  V+++ +  GRKG LAI+ +IF VT S  +VE KK  GDT+EY QFC  ELRP+LKDIVW    +N
Sbjct:  296 SVKPMSYNAFDLISSLSQGFDLS---GLFEKEERSESKFTTKKDAKEIVSKFEEIATSSERFNLTKSDVGVKMEDKREGRKGHLAIDVEIFEVTNSFHMVEFKKSGGDTMEYKQFCDRELRPSLKDIVWKWQGNN 427          
BLAST of CX070213 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 63/153 (41.18%), Postives = 89/153 (58.17%), Query Frame = -3
Query:  346 EADKSSKQPETLNAVHIISLSEGFDLSPXXXXXXXXXXXXXXXATTRPASSVISRFEEVAKAVKFNVKTSESRV-RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTAD---NPTLGLNLEEQQ 792
            E ++ S     LNA  IISLS GF+LS                 T +P ++V+ + +E+AK +K  VK  ++ V RL   + G+KG L ++A+IF VTPS L+VE+KK NGDT+EY +    ++RPALKDIVW+   D   N    L  E+QQ
Sbjct:  303 EENQGSLSLPNLNAFDIISLSTGFNLS--GFFEDTHGHQEERFTTRQPVTTVLGKLKELAKRLKLKVKKKDNGVLRLAAPKEGKKGFLELDAEIFEVTPSFLLVELKKTNGDTMEYRKLVKEDIRPALKDIVWVWQGDEHLNSQSILQGEQQQ 453          
The following BLAST results are available for this feature:
BLAST of CX070213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CIPK6_ARATH1.789e-4058.90CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPK6_ORYSJ1.088e-2951.28CBL-interacting protein kinase 6 OS=Oryza sativa s... [more]
CIPK5_ORYSJ1.420e-2948.91CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
CIPKK_ORYSJ9.528e-2647.10CBL-interacting protein kinase 20 OS=Oryza sativa ... [more]
CIPKC_ARATH4.426e-2342.07CBL-interacting serine/threonine-protein kinase 12... [more]
CIPKI_ORYSJ7.549e-2349.18CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPKI_ARATH9.860e-2341.96CBL-interacting serine/threonine-protein kinase 18... [more]
CIPK2_ORYSJ3.747e-2242.54CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]
CIPKK_ARATH8.347e-2243.70CBL-interacting serine/threonine-protein kinase 20... [more]
CIPKB_ORYSJ1.859e-2141.18CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15E02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15E02-J3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070213 ID=CX070213; Name=CX070213; organism=Citrus sinensis; type=EST; length=833bp
CTTTTTTTGGAATTACTTACTTAATTAGGTGCAAACTCAAACAATTATAC
AAACAATTACAAGTTGACAATGGCTGGTTCCGAATGATTCAAAGAAACAG
AACCAGACAACATGTTTTTGTGAGACTAAGAAACCCACAATCGCCACCAA
ACTCATACGTACACACAGCAAGGATAACAAAAACTAAGAACACAACAAAC
ACATGATGAGCCAGCCCATTGTTTTTTGTTTCCAATGATATTCCATGATC
ACCATCAAATTAATCAAACTCTAAATCCCATAATCAACAACAATCAATCA
ATCATCTGAGATATACCCACAATTCATCAGCAATCAATTTTAAATTTGTT
GCTCCTCCAGGTTCAAGCCAAGCGTGGGATTGTCAGCAGTTGACATCCAG
ACAATGTCCTTAAGCGCCGGCCGAAGCTCGTTGCTACAGAATTGATTGTA
CTCCAATGTATCACCATTATCTTTCTTCACTTCCACCACCAAAAGCGACG
GTGTAACGGCAAAGATGTCAGCATTGATAGCCAATTTGCCTTTCCTTCCG
CTTTCTTGGCCTTGTAATCTGACTCTTGACTCGCTCGTTTTGACATTAAA
CTTAACGGCCTTGGCCACCTCTTCAAATCTTGAGATCACACTGCTTGCAG
GCCTCGTGGTTGCAAATCTCAGCTCCTCTTTTTCCGCTCTCTTTTTCTCC
TCAAACAAAGGTGACAAATCAAACCCTTCCGACAAAGAGATGATATGAAC
CGCATTTAGAGTCTCAGGTTGCTTTGATGACTTGTCAGCTTCAAATTCCA
TCTCTTGCTTAGTTATCACAACCTTTGGGAGCA
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