CX070199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: TMEDA_RABIT (Transmembrane emp24 domain-containing protein 10 OS=Oryctolagus cuniculus GN=TMED10 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 45/158 (28.48%), Postives = 86/158 (54.43%), Query Frame = -3 Query: 285 MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWH 758 + G Y + + + G +H +++T + G+ + + G+FAFT + + CF + + D + GV+AK++ +AK + +E+EL++L D SI + Y+++REEEM++ N TN+R+ +FS FS+F I +A Q+++ Sbjct: 53 LVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYSKEDASKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFY 207
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: TMEDA_HUMAN (Transmembrane emp24 domain-containing protein 10 OS=Homo sapiens GN=TMED10 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 46/158 (29.11%), Postives = 86/158 (54.43%), Query Frame = -3 Query: 285 MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWH 758 + G Y + + + G SH +++T + G+ + + G+FAFT + + CF + + D + GV+AK++ +AK + +E+EL++L D SI + Y+++REEEM++ N TN+R+ +FS FS+F I +A Q+++ Sbjct: 53 LVTGAYEISDQSGGAGGLRSH---LKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFY 207
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: TMEDA_RAT (Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus GN=Tmed10 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15 Identity = 45/158 (28.48%), Postives = 86/158 (54.43%), Query Frame = -3 Query: 285 MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWH 758 + G Y + + + G +H +++T + G+ + + G+FAFT + + CF + + D + GV+AK++ +AK + +E+EL++L D SI + Y+++REEEM++ N TN+R+ +FS FS+F I +A Q+++ Sbjct: 53 LVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFY 207
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: TMEDA_MOUSE (Transmembrane emp24 domain-containing protein 10 OS=Mus musculus GN=Tmed10 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15 Identity = 45/158 (28.48%), Postives = 86/158 (54.43%), Query Frame = -3 Query: 285 MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWH 758 + G Y + + + G +H +++T + G+ + + G+FAFT + + CF + + D + GV+AK++ +AK + +E+EL++L D SI + Y+++REEEM++ N TN+R+ +FS FS+F I +A Q+++ Sbjct: 53 LVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFY 207
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: TMEDA_BOVIN (Transmembrane emp24 domain-containing protein 10 OS=Bos taurus GN=TMED10 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15 Identity = 45/158 (28.48%), Postives = 86/158 (54.43%), Query Frame = -3 Query: 285 MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWH 758 + G Y + + + G +H +++T + G+ + + G+FAFT + + CF + + D + GV+AK++ +AK + +E+EL++L D SI + Y+++REEEM++ N TN+R+ +FS FS+F I +A Q+++ Sbjct: 53 LVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFY 207
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: TMEDA_PONAB (Transmembrane emp24 domain-containing protein 10 OS=Pongo abelii GN=TMED10 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 46/158 (29.11%), Postives = 85/158 (53.80%), Query Frame = -3 Query: 285 MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWH 758 + G Y + + + G SH +++T + G+ + + G+FAFT + + CF + + D + GV+AK++ +AK + +E+EL++L D SI + Y+ +REEEM++ N TN+R+ +FS FS+F I +A Q+++ Sbjct: 53 LVTGAYEISDQSGGAGGLRSH---LKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMEKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFY 207
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: TMEDA_MESAU (Transmembrane protein Tmp21 OS=Mesocricetus auratus GN=TMED10 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.064e-15 Identity = 44/158 (27.85%), Postives = 85/158 (53.80%), Query Frame = -3 Query: 285 MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWH 758 + G Y + + + G +H +++T + G+ + + G+FAFT + + CF + + D + GV+AK++ +AK + +E+EL++L D SI + Y+++REEEM++ N TN+R+ +FS FS+ I +A Q+++ Sbjct: 53 LVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMLCLIGLATWQVFY 207
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: TMEDA_TAKRU (Transmembrane emp24 domain-containing protein 10 OS=Takifugu rubripes GN=tmed10 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.638e-15 Identity = 40/133 (30.08%), Postives = 77/133 (57.89%), Query Frame = -3 Query: 285 RVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWH 683 ++T + ++ + + G+FAFT + + CF + ++ D + GV+AK++ +AK + +E+EL++L D SI + Y+++REEEM++ N TN+R+ +FS FS+F I +A Q+++ Sbjct: 69 KITDSSSHTLYSKEDATKGKFAFTTEDYDMFEVCFESKCTGRVPDQLVNLDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFY 201
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: ERV25_CANAL (Endoplasmic reticulum vesicle protein 25 OS=Candida albicans GN=ERV25 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.072e-12 Identity = 45/158 (28.48%), Postives = 76/158 (48.10%), Query Frame = -3 Query: 288 VVNPNDGHPLPESHKLTVRVTSAYGNSY-HYADRVDSGQFAFTAAEAGDYMACF-------WAVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLW 737 VVN + +L ++VT + GN Y + D V AFT+ C W+ QT +++ D +G A+DW+ + + +E+ELK++ I +E+ YL+ REE M++ N TNSR+ W FS+ + ++ G +W Sbjct: 48 VVNIKTDGSKGDGQRLDLKVTDSLGNEYRNKKDVVGHANVAFTSQHNAAIDICLTNYLDNKWSKHQ--QTVRSVELDIESGAAARDWNALQASEKLKPVEVELKRIESITEEIVEELRYLKAREERMRDTNESTNSRVKW---FSIVVIASLVGFGVW 200
BLAST of CX070199 vs. ExPASy Swiss-Prot
Match: ERV25_NEUCR (Endoplasmic reticulum vesicle protein 25 OS=Neurospora crassa GN=erv-25 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.939e-12 Identity = 40/142 (28.17%), Postives = 73/142 (51.41%), Query Frame = -3 Query: 285 LTVRVTSAYGNSYHYADRVDSGQ-FAFTAAEAGDYMACFW-----AVDHSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWH 692 + + ++ ++GN Y A + Q FT+ + CF +P+ V +D D G AKDWS + + +E +L+++ + V + EM YLR RE+++++ N TN+R+ WF + F+ IA+ G Q+ + Sbjct: 65 VNMHISDSHGNEYGKAKDIAGEQRIVFTSHHDAAFDVCFENYLTAKYVENPRRHVELDID--IGADAKDWSAIQATEKLKPLETDLRRIEELVGEVVNEMDYLRAREQKLRDTNESTNNRVKWFGMATTFLLIALWGWQIMY 204 The following BLAST results are available for this feature:
BLAST of CX070199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070199 ID=CX070199; Name=CX070199; organism=Citrus sinensis; type=EST; length=769bpback to top |