CX070197

Overview
NameCX070197
Unique NameCX070197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 4.428e-78
Identity = 143/159 (89.94%), Postives = 147/159 (92.45%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRALFY+VMQCLGAICGAGVVKGF   G Y    GGANVVAHGYTKG GLGAEI+GTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  127 KLSLTRALFYIVMQCLGAICGAGVVKGFQ-PGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 7.553e-78
Identity = 142/159 (89.31%), Postives = 146/159 (91.82%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRA+FYM+MQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  127 KLSLTRAVFYMIMQCLGAICGAGVVKGFQPT-PYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.198e-77
Identity = 142/159 (89.31%), Postives = 146/159 (91.82%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRA+FY+VMQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  126 KLSLTRAVFYIVMQCLGAICGAGVVKGFQ-PNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFK 283
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.394e-77
Identity = 141/159 (88.68%), Postives = 146/159 (91.82%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  126 KLSLTRALYYIVMQCLGAICGAGVVKGFQPK-QYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.394e-77
Identity = 141/159 (88.68%), Postives = 146/159 (91.82%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  126 KLSLTRALYYIVMQCLGAICGAGVVKGFQPK-QYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 1.091e-76
Identity = 139/159 (87.42%), Postives = 148/159 (93.08%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRA+FYMVMQ LGAICGAGVVKGF G  ++G L GGAN VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI++NK  GW+DHWIFWVGPF+GA LAALYHQVVIRAIPFK
Sbjct:  129 KLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFK 287
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 286.189 bits (731), Expect = 1.425e-76
Identity = 140/159 (88.05%), Postives = 146/159 (91.82%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+   WDDHWIFWVGPF+GA LAA+YHQVVIRAIPFK
Sbjct:  128 KLSLTRALFYMVMQCLGAICGAGVVKGFQ-KGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFK 285
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.145e-76
Identity = 139/159 (87.42%), Postives = 147/159 (92.45%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRA+FY+VMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  W+DHWIFWVGPFVGA LAA+YHQV+IRAIPFK
Sbjct:  129 KLSLTRAIFYIVMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFK 286
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.070e-76
Identity = 137/159 (86.16%), Postives = 146/159 (91.82%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRA++Y+VMQCLGAICGAGVVKGF    QY  L GGAN +AHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+NKD  WDDHW+FWVGPF+GA LAALYH +VIRAIPFK
Sbjct:  126 KLSLTRAVYYIVMQCLGAICGAGVVKGFQPK-QYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFK 283
[Close]
BLAST of CX070197 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.575e-75
Identity = 136/159 (85.53%), Postives = 147/159 (92.45%), Query Frame = -1 
Query:  318 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 794
            KLSLTRALFY++MQCLGA+CGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+D  W+DHWIFWVGPF+GA LAA+YHQV+IRAIPFK
Sbjct:  129 KLSLTRALFYIIMQCLGAVCGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFK 286
The following BLAST results are available for this feature:
BLAST of CX070197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
PIP15_ARATH4.428e-7889.94Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH7.553e-7889.31Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH2.198e-7789.31Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP11_VICFA6.394e-7788.68Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH6.394e-7788.68Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP2_PEA1.091e-7687.42Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP12_ORYSJ1.425e-7688.05Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP11_ORYSJ4.145e-7687.42Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_ARATH7.070e-7686.16Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP12_MAIZE1.575e-7585.53Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15D03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15D03-H5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070197 ID=CX070197; Name=CX070197; organism=Citrus sinensis; type=EST; length=794bp
TTTTTTTAATAGAACTAGTTTTGTCCATATTATTACCAAGATGACATTGC
ACAAATCCATAGCCATACAAATGTACAAAGTGACAGCGCCCACCTACTTA
ACCATGGGCCCATCCGTCATCATCATCCACCTCTCTTCAAAATTAAAAAA
AAAAAAAAACGTTTTAAGGAAGGAAAACAGAGAAGCAGGCCCAGGTCCAG
CACCAGCAGATTTGAACAAAGGACTAATTAATATTTTATAATACACATAA
GCAAACCAGCAACAGCCATAAACAAATGCAGGTGCAATCACGAACGTTGA
TGAAGCGATCAGCTTCATTTGAAGGGAATGGCTCTGATCACGACTTGGTG
GTACAAAGCTGCGAGTCCAGCTCCAACGAATGGTCCCACCCAGAAAATCC
AGTGGTCATCCCAACCGCGGTCCTTGTTGTAGATGATTGCAGCTCCAAGA
CTCCTCGCTGGGTTGATGCCAGTTCCGGTAATTGGGATAGTGGCCAAGTG
AACCAAAAACACAGCGAACCCAATTGGCAGAGGAGCCAAAATAGGAACAT
GAGAGTCCCTGGCGCTCCGTTTGGCATCAGTGGCAGAGAAAACTGTGTAG
ACAAGAACAAAAGTACCAATAATCTCGGCACCAAGACCATCACCCTTGGT
GTAGCCATGAGCTACGACGTTGGCACCGCCGGCGAGCCGCCCGTATTGGC
CGGCACCCATGAAACCCTTAACAACGCCAGCACCGCAGATGGCTCCCAGA
CACTGCATCACCATGTAGAAAAGTGCACGTGTCAGCGACAGCTT
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