CX070193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_CITSI (30S ribosomal protein S3, chloroplastic OS=Citrus sinensis GN=rps3 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.201e-43 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEKK 264 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEKK Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEKK 219
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_TOBAC (30S ribosomal protein S3, chloroplastic OS=Nicotiana tabacum GN=rps3 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40 Identity = 81/87 (93.10%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 261 AGQLKNRVSFRKAMKKAIELTEQADTKGIQ+QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIF+DE+ Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDEE 218
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_NICSY (30S ribosomal protein S3, chloroplastic OS=Nicotiana sylvestris GN=rps3 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40 Identity = 81/87 (93.10%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 261 AGQLKNRVSFRKAMKKAIELTEQADTKGIQ+QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIF+DE+ Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDEE 218
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_GOSHI (30S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum GN=rps3 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40 Identity = 80/87 (91.95%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 261 AGQLKNRVSFRKAMKKAIELTEQADTKGIQ+QIAGR+DGKEIAR EWIREGRVPLQTIGAKI+YCSY VRTIYGVLGIKIWIF+DE+ Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_GOSBA (30S ribosomal protein S3, chloroplastic OS=Gossypium barbadense GN=rps3 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40 Identity = 80/87 (91.95%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 261 AGQLKNRVSFRKAMKKAIELTEQADTKGIQ+QIAGR+DGKEIAR EWIREGRVPLQTIGAKI+YCSY VRTIYGVLGIKIWIF+DE+ Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_DRANE (30S ribosomal protein S3, chloroplastic OS=Draba nemorosa GN=rps3 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40 Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 261 AGQLKNRVSFRKAMKKAIELTEQA+TKGIQVQIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIFVDE+ Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIDAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_ARAHI (30S ribosomal protein S3, chloroplastic OS=Arabis hirsuta GN=rps3 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40 Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 261 AGQLKNRVSFRKAMKKAIELTEQA+TKGIQVQIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIFVDE+ Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIDAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_SOLTU (30S ribosomal protein S3, chloroplastic OS=Solanum tuberosum GN=rps3 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40 Identity = 80/87 (91.95%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 261 AGQLKNRVSFRKAMKKAIELTEQADTKGIQ+QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYG+LGIKIWIF+DE+ Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_SOLLC (30S ribosomal protein S3, chloroplastic OS=Solanum lycopersicum GN=rps3 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40 Identity = 80/87 (91.95%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 261 AGQLKNRVSFRKAMKKAIELTEQADTKGIQ+QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYG+LGIKIWIF+DE+ Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218
BLAST of CX070193 vs. ExPASy Swiss-Prot
Match: RR3_SOLBU (30S ribosomal protein S3, chloroplastic OS=Solanum bulbocastanum GN=rps3 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40 Identity = 80/87 (91.95%), Postives = 85/87 (97.70%), Query Frame = 1 Query: 1 AGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 261 AGQLKNRVSFRKAMKKAIELTEQADTKGIQ+QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYG+LGIKIWIF+DE+ Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218 The following BLAST results are available for this feature:
BLAST of CX070193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070193 ID=CX070193; Name=CX070193; organism=Citrus sinensis; type=EST; length=788bpback to top |