CX070182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 476.093 bits (1224), Expect = 9.836e-134 Identity = 224/266 (84.21%), Postives = 245/266 (92.11%), Query Frame = 1 Query: 1 VKFNKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITENFVVVPDQQVVFKLKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERDEVVVIGSCMTPADSIFNECDESL 798 VKF GS SY+CRFT+TNRFVQER LGRPVFPKAIGELHGHTGIARL+LFY+RA G+VDP+HGTGVANAGLVYFN RLLAMSEDDLPY V++TP+G+LKTVGRFDF GQL+STMIAHPKVDP +G+LFALSYDVV KPYLKYF+FSP G KSPDVEI L++PTMMHDFAITENFVVVPDQQVVFKL EMIRGGSPV+YDKNKV+RFGILDK A D+S +KWIDAPDCFCFHLWNAWEEPE DEVVVIGSCMTP DSIFNE DE+L Sbjct: 180 VKFEHGSASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVEIQLDQPTMMHDFAITENFVVVPDQQVVFKLPEMIRGGSPVVYDKNKVARFGILDKYAEDSSNIKWIDAPDCFCFHLWNAWEEPETDEVVVIGSCMTPPDSIFNESDENL 445
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 473.011 bits (1216), Expect = 8.327e-133 Identity = 222/266 (83.46%), Postives = 243/266 (91.35%), Query Frame = 1 Query: 1 VKFNKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITENFVVVPDQQVVFKLKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERDEVVVIGSCMTPADSIFNECDESL 798 VKF G+ SY+CRFTET R QE+SLGRPVFPKAIGELHGH+GIARLLLFY+R+LF LVD SHG GVANAGLVYFNN LLAMSEDDLPYHVR+T +G+L TVGR+DF+GQL STMIAHPK+DPV GDL ALSYDVV+KPYLKYF+FS G+KSPDVEIPL+EPTMMHDFAITENFVVVPDQQVVFKL EMI GGSPV+YDKNK SRFGILDKNA DA+ M+WIDAP+CFCFHLWNAWEEPE DE+VVIGSCMTPADSIFNECDESL Sbjct: 199 VKFTNGAASYACRFTETQRLAQEKSLGRPVFPKAIGELHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNNHLLAMSEDDLPYHVRITSNGDLTTVGRYDFNGQLNSTMIAHPKLDPVNGDLHALSYDVVQKPYLKYFRFSADGVKSPDVEIPLKEPTMMHDFAITENFVVVPDQQVVFKLTEMITGGSPVVYDKNKTSRFGILDKNAKDANAMRWIDAPECFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESL 464
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1) HSP 1 Score: 444.506 bits (1142), Expect = 3.172e-124 Identity = 208/266 (78.20%), Postives = 237/266 (89.10%), Query Frame = 1 Query: 1 VKFNKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITENFVVVPDQQVVFKLKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERDEVVVIGSCMTPADSIFNECDESL 798 V+F+ GSVSY+CRFTETNR VQER GRPVFPKAIGELHGH GIA+L+LF +R LFGLVDP+ G GVANAGLVYFN LLAMSEDDLPYHV+VT +G+L+T GR+DF GQLKSTMIAHPK+DP T +LFALSYDVV KPYLKYF+F+ G KSPDVEIPL++PTM+HDFAITENFVV+PDQQVVF+L EMIRGGSPV+YD+ K SRFGIL+KNA DAS ++WI+ PDCFCFHLWN+WEEPE DEVVVIGSCMTP DSIFNE DE+L Sbjct: 240 VRFDNGSVSYACRFTETNRLVQERECGRPVFPKAIGELHGHLGIAKLMLFNTRGLFGLVDPTGGLGVANAGLVYFNGHLLAMSEDDLPYHVKVTQTGDLETSGRYDFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVEIPLDQPTMIHDFAITENFVVIPDQQVVFRLPEMIRGGSPVVYDEKKKSRFGILNKNAKDASSIQWIEVPDCFCFHLWNSWEEPETDEVVVIGSCMTPPDSIFNEHDETL 505
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 435.647 bits (1119), Expect = 1.473e-121 Identity = 204/266 (76.69%), Postives = 231/266 (86.84%), Query Frame = 1 Query: 1 VKFNKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITENFVVVPDQQVVFKLKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERDEVVVIGSCMTPADSIFNECDESL 798 VK G SYSCRFTET R VQE+ LG P+FPKAIGELHGH+GIARL+LFY+R LFGL++ +GTGVANAGLVYF++RLLAMSEDDLPY VRVT +G+L+T+GRFDF GQL S MIAHPK+DPVT +LFALSYDVVKKPYLKYF+FSP+G KSPDVEIPL PTMMHDFAITENFVV+PDQQVVFKL +M G SPV YD K+SRFGIL +NA DAS+M W+++P+ FCFHLWNAWE PE DEVVVIGSCMTPADSIFNECDE L Sbjct: 170 VKITNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRLLAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVEIPLASPTMMHDFAITENFVVIPDQQVVFKLSDMFLGKSPVKYDGEKISRFGILPRNAKDASEMVWVESPETFCFHLWNAWESPETDEVVVIGSCMTPADSIFNECDEQL 435
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2) HSP 1 Score: 422.935 bits (1086), Expect = 9.882e-118 Identity = 200/263 (76.05%), Postives = 223/263 (84.79%), Query Frame = 1 Query: 10 NKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITENFVVVPDQQVVFKLKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERDEVVVIGSCMTPADSIFNECDESL 798 N + SY+CRFTET R QER++GRPVFPKAIGELHGH+GIARL LFY+RA GLVDPS GTGVANAGLVYFN RLLAMSEDDLPYHVRV G+L+TVGR+DF GQL MIAHPK+DP TG+L ALSYDV+K+PYLKYF F P G KS DVEIPLE+PTM+HDFAITEN VVVPD QVVFKL+EM+RGGSPV+ DK K SRFG+L K+A DAS+M W+D PDCFCFHLWNAWE+ EVVVIGSCMTPADSIFNE DE L Sbjct: 184 NGAAESYACRFTETARLRQERAIGRPVFPKAIGELHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAMSEDDLPYHVRVADDGDLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVEIPLEQPTMIHDFAITENLVVVPDHQVVFKLQEMLRGGSPVVLDKEKTSRFGVLPKHAADASEMAWVDVPDCFCFHLWNAWEDEATGEVVVIGSCMTPADSIFNESDERL 446
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 422.165 bits (1084), Expect = 1.686e-117 Identity = 196/266 (73.68%), Postives = 234/266 (87.97%), Query Frame = 1 Query: 1 VKFNKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITENFVVVPDQQVVFKLKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERDEVVVIGSCMTPADSIFNECDESL 798 VK GS SY+CRFT+T R VQE+ LGRPVFPKAIGELHGH+GIARL+LFY+R L GL++ +G GVANAGLVYFNNRLLAMSEDDLPY +++T +G+L+TVGR+DF GQLKS MIAHPK+DPVT +L ALSYDVVKKPYLKYF+FSP G+KSP++EIPLE PTM+HDFAITENFVV+PDQQVVFKL EMI G SPV++D KVSR GI+ K+AT+AS++ W+++P+ FCFHLWNAWE PE +E+VVIGSCM+PADSIFNE DESL Sbjct: 163 VKITNGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNNRLLAMSEDDLPYQLKITQTGDLQTVGRYDFDGQLKSAMIAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGVKSPELEIPLETPTMIHDFAITENFVVIPDQQVVFKLGEMISGKSPVVFDGEKVSRLGIMPKDATEASQIIWVNSPETFCFHLWNAWESPETEEIVVIGSCMSPADSIFNERDESL 428
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 8.697e-98 Identity = 170/260 (65.38%), Postives = 207/260 (79.62%), Query Frame = 1 Query: 22 VSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITENFVVVPDQQVVFKLKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERD---EVVVIGSCMTPADSIFNECDE 792 VSYSCR+T+TNR VQE +LGR VFPK IGELHGH+G+ARL LF +RA GLVD + G GVANAG+V+FN RLLAMSEDDLPY V++ G+L+T+GRF F Q+ S++IAHPKVD TGDL LSY+V+KKP+L+Y +F+ G K+ DVEI L EPTM+HDFAITENFVV+PDQQ+VFKL EMIRGGSPVIY K K++RFG+L K S + W+D PDCFCFHLWNAWEE + +VVIGSCM+P D+IF+E E Sbjct: 166 VSYSCRYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLKFNTCGKKTRDVEITLPEPTMIHDFAITENFVVIPDQQMVFKLSEMIRGGSPVIYVKEKMARFGVLSKQDLTGSDINWVDVPDCFCFHLWNAWEERTEEGDPVIVVIGSCMSPPDTIFSESGE 425
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: CCD4_ARATH (Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.566e-49 Identity = 101/253 (39.92%), Postives = 149/253 (58.89%), Query Frame = 1 Query: 1 VKFNKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTG-IARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEI-PLEEPTMMHDFAITENFVVVPDQQVVFKLKEM---IRGGSPVIYDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERDEVVVI 744 +K + G + R+ +T ++ E+ G PV P +G T +AR L +R L G +P +G G+AN L +F+NRL A+ E DLPY VR+T SG+++T+GR+DF G+L +M AHPK DP+TG+ FA Y V P+L YF+F G K DV I + P+ +HDFAIT+ + + Q+ ++ + + GGSPV D K R G++ K A D S+MKW + P H NAW+E + + VV+I Sbjct: 169 IKIHNGKATLCSRYVKTYKYNVEKQTGAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDFDGKLAMSMTAHPKTDPITGETFAFRYGPV-PPFLTYFRFDSAGKKQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRLGVIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNSVVLI 420
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.705e-48 Identity = 101/249 (40.56%), Postives = 146/249 (58.63%), Query Frame = 1 Query: 1 VKFNKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITENFVVVPDQQVVFKLKEMIRGGSPVI-YDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERDEVVVI 744 ++ G +Y RF ET+R QE GR F K IG+L G G+ + + R ++D S+G G N LVY + +LLA+SE D PY ++V G+L+T+G D+ +L + AHPKVDP TG++F+ Y PY+ Y S G V I + +P MMHDFAITEN+ V D ++F+ KEM++ + + +D K +RFG+L + A D ++W + P+CF FH NAWE E DEVV+I Sbjct: 108 LRIKDGKATYVSRFVETSRLKQEEYFGRSKFMK-IGDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTTNTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGEMFSFGY-AHTPPYITYRVISKDGYMHDPVPITISDPIMMHDFAITENYAVFMDLPLIFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEQHIRWFELPNCFIFHNANAWE--EEDEVVLI 352
BLAST of CX070182 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.402e-47 Identity = 100/249 (40.16%), Postives = 144/249 (57.83%), Query Frame = 1 Query: 1 VKFNKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRALFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKSTMIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITENFVVVPDQQVVFKLKEMIRGGSPVI-YDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLWNAWEEPERDEVVVI 744 ++ G SY RF +T+RF QE F K IG+L G G+ + + RA ++D S+G G AN LVY + +LLA+SE D PY ++V G+L+T+G D+ +L AHPKVDP TG++F Y PY+ Y S G V I + +P MMHDFAITEN+ + D + F+ KEM++ + + +D K +RFG+L + A D ++W + P+CF FH NAWE E DE+V+I Sbjct: 106 LRIKDGKASYVSRFVKTSRFKQEEYFNGSKFMK-IGDLKGLFGLLMVNMQMLRAKLKILDVSYGHGTANTALVYHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNFTAHPKVDPFTGEMFTFGYSHT-APYVTYRVISKDGFMQDPVPITISDPVMMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKHIRWFELPNCFIFHNANAWE--EEDEIVLI 350 The following BLAST results are available for this feature:
BLAST of CX070182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070182 ID=CX070182; Name=CX070182; organism=Citrus sinensis; type=EST; length=798bpback to top |