CX070173

Overview
NameCX070173
Unique NameCX070173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.208e-38
Identity = 74/85 (87.06%), Postives = 80/85 (94.12%), Query Frame = -1
Query:  313 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 567
            LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP+SD+PSVV+KYM KELE+EKFITH VPFSEINKAFD ML GESIRC+I M+
Sbjct:  297 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGESIRCMITME 381          
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 3.208e-38
Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = -1
Query:  316 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 567
            LVGVP+KDDAFKTHPMN LNERTLKGTFFGNYKP++D+P VVEKYMNKELE+EKFITHTVPFSEINKAFD ML GESIRCII M
Sbjct:  294 LVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESIRCIITM 377          
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.219e-37
Identity = 73/85 (85.88%), Postives = 80/85 (94.12%), Query Frame = -1
Query:  313 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 567
            LVGVP+KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVEKYM  ELE+EKFITHTVPFSEINKAFD ML GESIRCII+M+
Sbjct:  295 LVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKME 379          
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.079e-37
Identity = 72/85 (84.71%), Postives = 80/85 (94.12%), Query Frame = -1
Query:  313 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 567
            LVGVP+K+  FKTHPMNLLNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  295 LVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.049e-37
Identity = 71/85 (83.53%), Postives = 79/85 (92.94%), Query Frame = -1
Query:  313 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 567
            LVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  295 LVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.049e-37
Identity = 71/85 (83.53%), Postives = 79/85 (92.94%), Query Frame = -1
Query:  313 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 567
            LVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  295 LVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.901e-37
Identity = 71/85 (83.53%), Postives = 79/85 (92.94%), Query Frame = -1
Query:  313 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 567
            LVGVP KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVE+YM  ELE+EKFITH++PFSEINKAFD ML GESIRCIIRM+
Sbjct:  295 LVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYMLKGESIRCIIRME 379          
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36
Identity = 70/85 (82.35%), Postives = 78/85 (91.76%), Query Frame = -1
Query:  313 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 567
            LVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  294 LVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36
Identity = 70/85 (82.35%), Postives = 78/85 (91.76%), Query Frame = -1
Query:  313 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 567
            LVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  294 LVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of CX070173 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.688e-36
Identity = 71/85 (83.53%), Postives = 77/85 (90.59%), Query Frame = -1
Query:  313 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 567
            LVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPF+EINKAFDLM  GE IRCIIRM+
Sbjct:  294 LVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLMAKGEGIRCIIRME 378          
The following BLAST results are available for this feature:
BLAST of CX070173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
ADH1_PETHY3.208e-3887.06Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_ARATH3.208e-3888.10Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_PEA1.219e-3785.88Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_SOLTU2.079e-3784.71Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH3_SOLTU6.049e-3783.53Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU6.049e-3783.53Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_TRIRP7.901e-3783.53Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH2_ORYSJ1.348e-3682.35Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI1.348e-3682.35Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH1_MAIZE6.688e-3683.53Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15C01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15C01-F1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070173 ID=CX070173; Name=CX070173; organism=Citrus sinensis; type=EST; length=570bp
TTTTATAAGAAAGAAGATTTACACGAAAATCTTTATTACATAAGCTACAA
AAAGAAGTACTGTAAGAAATAGGTAGAAAACACACCTCTTTGTACGCCAT
ATGCAGCAAGTCATCAAACAGAAAAACAAAACAAAAAAAGGGACTGTAAG
AAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCAAGTCATCA
AACATACAGCATAAATTACTTATTCTCGGGGTAATATATAACTTGGAAAA
TTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGCAACAGCAG
ACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTCTCCCGCAA
GCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAGTGTGAGTG
ATGAATTTCTCGACCTCCAACTCCTTGTTCATGTATTTTTCAACAACAGA
AGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAGAG
TCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCATCATCTTTG
TTTGGCACACCCACAAGCCT
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