CX070169

Overview
NameCX070169
Unique NameCX070169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSL1_SOLTU (Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 368.237 bits (944), Expect = 3.061e-101
Identity = 177/202 (87.62%), Postives = 193/202 (95.54%), Query Frame = -2
Query:  221 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 826
            HDPEIGDLLKV+FVPDYNVSVAELLIPAS+LS+HISTAGMEASGTSNMKFAMNGCI IGTLDGANVEIR+EVGEENFFLFGA+AHEIAGLRKER++GKFVPD RFEEVK+FV+SG FGSYNYD+L+GSLEGNEGFG+ADYFLVGKDFPSY+ECQEKVDEAY DQKRWT MSI+NTAGS KFSSDRTI EYA+DIWNI  VE+
Sbjct:  764 HDPEIGDLLKVVFVPDYNVSVAELLIPASDLSEHISTAGMEASGTSNMKFAMNGCIQIGTLDGANVEIREEVGEENFFLFGAQAHEIAGLRKERADGKFVPDERFEEVKEFVRSGAFGSYNYDDLIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYRDQKRWTTMSILNTAGSYKFSSDRTIHEYAKDIWNIEAVEI 965          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSL2_SOLTU (Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 3.998e-101
Identity = 173/203 (85.22%), Postives = 194/203 (95.57%), Query Frame = -2
Query:  218 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 826
            HDPEIGDLLKV+FVPDYNVSVAE+LIP SELSQHISTAGMEASGTSNMKF+MNGC+LIGTLDGANVEIR+EVGE+NFFLFGA+AHEIAGLRKER+EGKFVPD RFEEVK F+++GVFG+YNY+ELMGSLEGNEG+G+ADYFLVGKDFP Y+ECQ+KVDEAY DQK+WT+MSI+NTAGS KFSSDRTI +YARDIW I PVELP
Sbjct:  772 HDPEIGDLLKVVFVPDYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFSMNGCLLIGTLDGANVEIREEVGEDNFFLFGAQAHEIAGLRKERAEGKFVPDPRFEEVKAFIRTGVFGTYNYEELMGSLEGNEGYGRADYFLVGKDFPDYIECQDKVDEAYRDQKKWTKMSILNTAGSFKFSSDRTIHQYARDIWRIEPVELP 974          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSL_VICFA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2)

HSP 1 Score: 366.696 bits (940), Expect = 8.906e-101
Identity = 177/202 (87.62%), Postives = 193/202 (95.54%), Query Frame = -2
Query:  221 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 826
            HDPEIGDLLKVIFVPDYNVSVAE+LIPASELSQHISTAGMEASGTSNMKFAMNGC+ IGTLDGANVEIR+EVG +NFFLFGA+A EI GLRKER+ GKFVPD RFEEVKKFV+SGVFGSYNYDEL+GSLEGNEGFG+ADYFLVG+DFPSYLECQE+VD+AY DQK+WTRMSI+NTAGSSKFSSDRTI EYAR+IWNI PV+L
Sbjct:  801 HDPEIGDLLKVIFVPDYNVSVAEMLIPASELSQHISTAGMEASGTSNMKFAMNGCLQIGTLDGANVEIREEVGADNFFLFGAKAREIVGLRKERARGKFVPDPRFEEVKKFVRSGVFGSYNYDELIGSLEGNEGFGRADYFLVGQDFPSYLECQEEVDKAYRDQKKWTRMSILNTAGSSKFSSDRTIHEYAREIWNIEPVKL 1002          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSL_IPOBA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 3.384e-100
Identity = 179/203 (88.18%), Postives = 187/203 (92.12%), Query Frame = -2
Query:  218 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 826
            HDPEIGDLLKVIFVPDYNVS AELLIPAS LSQHISTAGMEASG SNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA AHEIAGLRKER+EGKFVPD RFEEVK+F+K GVFGS  YDEL+GSLEGNEGFG+ DYFLVGKDFPSY+ECQEKVDEAY DQK WTRMSI+NTAGS KFSSDRTI EYA+DIWNI PV  P
Sbjct:  753 HDPEIGDLLKVIFVPDYNVSAAELLIPASGLSQHISTAGMEASGQSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGAEAHEIAGLRKERAEGKFVPDERFEEVKEFIKRGVFGSNTYDELLGSLEGNEGFGRGDYFLVGKDFPSYIECQEKVDEAYRDQKIWTRMSILNTAGSYKFSSDRTIHEYAKDIWNIQPVVFP 955          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSH_ARATH (Alpha-glucan phosphorylase, H isozyme OS=Arabidopsis thaliana GN=At3g46970 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 6.412e-83
Identity = 146/202 (72.28%), Postives = 173/202 (85.64%), Query Frame = -2
Query:  218 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 823
            DPE+ + LKV+FVP+YNV+VAE+LIP SELSQHISTAGMEASGTSNMKFA+NGC++IGTLDGANVEIR+EVGEENFFLFGA A ++  LRKER +G F PD RFEE K+FVKSGVFGSY+Y  L+ SLEGN GFG+ DYFLVG DFPSY++ Q KVDEAY D+K W +MSI++TAGS KFSSDRTI +YA++IWNI    +P
Sbjct:  640 DPEVNEYLKVVFVPNYNVTVAEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEENFFLFGATADQVPRLRKEREDGLFKPDPRFEEAKQFVKSGVFGSYDYGPLLDSLEGNTGFGRGDYFLVGYDFPSYMDAQAKVDEAYKDRKGWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEACPVP 841          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSH_VICFA (Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.866e-82
Identity = 145/202 (71.78%), Postives = 172/202 (85.15%), Query Frame = -2
Query:  218 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 823
            DPE+   LKV+FVP+YNVSVAE+LIP SELSQHISTAGMEASGTSNMKFA+N  ++IGTLDGANVEIR+E+GEENFFLFGA A E+  LRKER  G F PD RFEE KKF++SGVFGSY+Y+ L+ SLEGN G+G+ DYFLVG DFPSY++ QEKVDEAY D+KRW +MSI++TAGS KFSSDRTI +YA++IWNI    +P
Sbjct:  641 DPEVNSYLKVVFVPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFALNRVLIIGTLDGANVEIREEIGEENFFLFGATADEVPRLRKERENGLFKPDPRFEEAKKFIRSGVFGSYDYNPLLDSLEGNSGYGRGDYFLVGYDFPSYMDAQEKVDEAYRDKKRWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEECRVP 842          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSH_SOLTU (Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.428e-82
Identity = 139/202 (68.81%), Postives = 173/202 (85.64%), Query Frame = -2
Query:  218 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 823
            DP++ D LKV+FVP+YNVSVAE+LIP SELSQHISTAGMEASGTSNMKFA+NGC++IGTLDGANVEIR+E+GE+NFFLFGA A E+  LRK+R  G F PD RFEE K+F++SG FG+Y+Y+ L+ SLEGN G+G+ DYFLVG DFPSY++ Q +VDEAY D+KRW +MSI++T+GS KFSSDRTI +YA++IWNI    +P
Sbjct:  637 DPDVNDYLKVVFVPNYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEDNFFLFGATADEVPQLRKDRENGLFKPDPRFEEAKQFIRSGAFGTYDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDAQARVDEAYKDRKRWIKMSILSTSGSGKFSSDRTISQYAKEIWNIAECRVP 838          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSH_WHEAT (Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 6.001e-81
Identity = 137/203 (67.49%), Postives = 173/203 (85.22%), Query Frame = -2
Query:  218 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 826
            +D ++   LKV+F+P+YNVSVAE+LIP SELSQHISTAGMEASGTSNMKF++NGC++IGTLDGANVEIR+EVG++NFFLFGA+A ++AGLRK+R  G F PD RFEE K+F++SG FG+Y+Y  L+ SLEGN GFG+ DYFLVG DFPSY++ Q +VDEAY D+K+W +MSI+NTAGS KFSSDRTI +YA++IW I    +P
Sbjct:  630 NDADVNKYLKVVFIPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFSLNGCVIIGTLDGANVEIREEVGQDNFFLFGAKADQVAGLRKDRENGLFKPDPRFEEAKQFIRSGAFGTYDYTPLLDSLEGNTGFGRGDYFLVGYDFPSYIDAQARVDEAYKDKKKWVKMSILNTAGSGKFSSDRTIDQYAKEIWGISACPVP 832          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHS2_DICDI (Glycogen phosphorylase 2 OS=Dictyostelium discoideum GN=glpD PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.820e-53
Identity = 99/198 (50.00%), Postives = 143/198 (72.22%), Query Frame = -2
Query:  236 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSY-NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 826
            +DP++GDLLKV+F+P+Y VS AE++IPAS++SQHISTAG EASGTSNMKF+MNG ++IGTLDGAN+EIR  +G EN ++FGAR+ E+  ++K   +GKF PD R+  V   +K   FG +  + +++ S+ G       D++++  DF SYL+ Q  +D+ + D+ +W + SIM +    KFSSDRTI+EYA+ IW I
Sbjct:  715 NDPKVGDLLKVVFIPNYCVSNAEIIIPASDISQHISTAGTEASGTSNMKFSMNGGLIIGTLDGANIEIRDAIGHENMYIFGARSEEVNKVKKIIHDGKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGN-----DHYILSYDFGSYLDIQNSIDQDFKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGI 907          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSG_SYNY3 (Glycogen phosphorylase OS=Synechocystis sp. (strain PCC 6803) GN=glgP PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.594e-49
Identity = 112/216 (51.85%), Postives = 140/216 (64.81%), Query Frame = -2
Query:  209 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG-----KFVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV--ELP*LC 826
            +DP IGD LKVIF+PDYNV   + + PA++LS+ ISTAG EASGT NMKF+MNG + IGTLDGAN+EIR+EVG ENFFLFG    E+    K  +EG      +  +A  + V   + SG F   +   +  LM SL G       D +LV  DF +Y++CQ +V EAY DQ+ W RM+I+N A   KFSSDRTI+EYA DIW I PV  EL  LC
Sbjct:  631 NDPTIGDRLKVIFLPDYNVKFGQRVYPAADLSEQISTAGKEASGTGNMKFSMNGALTIGTLDGANIEIREEVGAENFFLFGLTTPEV---EKTLAEGYQPWEYYNNNANLKAVVDLINSGFFSHGDTALFRPLMDSLLGQ------DPYLVFADFQAYVDCQNQVGEAYKDQENWARMAILNVARMGKFSSDRTIREYAEDIWAIKPVVIELEDLC 837          
The following BLAST results are available for this feature:
BLAST of CX070169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PHSL1_SOLTU3.061e-10187.62Alpha-1,4 glucan phosphorylase L-1 isozyme, chloro... [more]
PHSL2_SOLTU3.998e-10185.22Alpha-1,4 glucan phosphorylase L-2 isozyme, chloro... [more]
PHSL_VICFA8.906e-10187.62Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHSL_IPOBA3.384e-10088.18Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHSH_ARATH6.412e-8372.28Alpha-glucan phosphorylase, H isozyme OS=Arabidops... [more]
PHSH_VICFA1.866e-8271.78Alpha-glucan phosphorylase, H isozyme OS=Vicia fab... [more]
PHSH_SOLTU5.428e-8268.81Alpha-glucan phosphorylase, H isozyme OS=Solanum t... [more]
PHSH_WHEAT6.001e-8167.49Alpha-glucan phosphorylase, H isozyme OS=Triticum ... [more]
PHS2_DICDI1.820e-5350.00Glycogen phosphorylase 2 OS=Dictyostelium discoide... [more]
PHSG_SYNY31.594e-4951.85Glycogen phosphorylase OS=Synechocystis sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15B11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15B11-D21-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070169 ID=CX070169; Name=CX070169; organism=Citrus sinensis; type=EST; length=827bp
TTTTTTGAAACAAGATTTTCAGTTCTTATTTATTTTATTCTATTAACTAC
GTAATACAGTAATTATATTCATCGAAGATACATTTATTCACGGCTTTCAT
CCAGGGATCATAAGCATTTTGCTTTACATAGAACATATATCAACAGGATG
CCATAAGTGATCAGAAAAGCCTGTGGTAGTCCCAACTCAAGTACTAGGAA
CAAGCATTACACAGTCACGGCAATTCGACGGGTATTATGTTCCATATGTC
TCGGGCATATTCCTGAATCGTTCTGTCGCTGCTGAACTTGGATGAACCCG
CTGTGTTCATGATCGACATTCTCGTCCATCTCTTTTGATCGCAATATGCT
TCATCAACCTTCTCTTGGCATTCCAAGTAACTAGGGAAATCTTTGCCCAC
GAGGAAATAATCTGCCTGGCCAAAACCTTCATTTCCTTCCAGTGATCCCA
TTAGTTCATCATAGTTGTAAGAACCAAAAACACCAGATTTGACAAATTTC
TTCACTTCTTCAAAACGTGCGTCGGGAACAAATTTCCCCTCAGATCTTTC
TTTTCTCAATCCTGCAATCTCGTGGGCTCTGGCACCAAATAGGAAAAAGT
TCTCCTCTCCAACCTCTTGCCGTATTTCAACATTGGCACCATCCAAGGTT
CCAATCAAAATGCAACCATTCATTGCAAATTTCATGTTACTGGTACCACT
AGCCTCCATCCCGGCAGTACTGATGTGTTGTGAGAGCTCACTTGCAGGTA
TAAGCAATTCAGCCACACTTACATTGTAATCAGGGACAAAAATAACCTTC
AATAAGTCACCTATTTCAGGATCATGA
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