CX069907

Overview
NameCX069907
Unique NameCX069907
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL7_ARATH (4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.853e-37
Identity = 75/90 (83.33%), Postives = 87/90 (96.67%), Query Frame = -1
Query:  339 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELIAKVRAKM 608
            ELEGLLVSHP+ILDAVVIPFPD EAGEVPIA+VVRSPNSS+TE+D+QKFIAKQVAP+KRLRRV+FI+ VPKSA+GKILRREL+ +VR+KM
Sbjct:  455 ELEGLLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVSFISLVPKSAAGKILRRELVQQVRSKM 544          
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.760e-35
Identity = 75/88 (85.23%), Postives = 84/88 (95.45%), Query Frame = -1
Query:  345 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELIAKVRA 608
            ELEGLL+SHPEILDAVVIPFPDA+AGEVPIAYVVRSP+SSLTE DVQKFI KQVA +KRL+RVTF+ SVPKSASGKILRR+LIA+VR+
Sbjct:  462 ELEGLLLSHPEILDAVVIPFPDAKAGEVPIAYVVRSPDSSLTEVDVQKFIEKQVAYYKRLKRVTFVGSVPKSASGKILRRQLIAQVRS 549          
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.191e-26
Identity = 55/90 (61.11%), Postives = 75/90 (83.33%), Query Frame = -1
Query:  339 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELIAKVRAKM 608
            ELE LL++HP+ILDA VIPFPD EAG+ P+AYVVR   S+L+E+ V  FI+KQVAP+K++R+V+FINS+PK+ASGK LR++LI    +K+
Sbjct:  461 ELEALLITHPDILDAAVIPFPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQVAPYKKIRKVSFINSIPKTASGKTLRKDLIKLATSKL 550          
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL5_ARATH (4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.068e-25
Identity = 52/83 (62.65%), Postives = 70/83 (84.34%), Query Frame = -1
Query:  360 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELI 608
            ELE LL++HPEI DA VIPFPD E G+ P+AYVVR   SSL+E+ + +F+AKQVAP+KR+R+V F++S+PK+ SGKILR++LI
Sbjct:  455 ELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLI 537          
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL3_ARATH (4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.701e-25
Identity = 53/90 (58.89%), Postives = 73/90 (81.11%), Query Frame = -1
Query:  339 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELIAKVRAKM 608
            ELE LL++HP ILDA VIPFPD EAG+ P+AYV R P S+L+E++V  FI+ QVAP+K++R+V FI+S+PK+ASGK LR++LI    +K+
Sbjct:  463 ELEALLIAHPHILDAAVIPFPDREAGQYPMAYVARKPESNLSEKEVIDFISNQVAPYKKIRKVAFISSIPKTASGKTLRKDLIKLSTSKL 552          
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL5_ORYSJ (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24
Identity = 50/83 (60.24%), Postives = 69/83 (83.13%), Query Frame = -1
Query:  360 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELI 608
            ELE +L SHP I DA VIP+PD EAGE+P+A++VR P S++T+E V  ++AKQVAP+K++RRV F+ ++PKS +GKILRREL+
Sbjct:  449 ELEHILQSHPGIADAAVIPYPDEEAGELPMAFIVRQPGSNITKEQVMDYVAKQVAPYKKVRRVAFVTAIPKSPAGKILRRELV 531          
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24
Identity = 49/90 (54.44%), Postives = 71/90 (78.89%), Query Frame = -1
Query:  339 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELIAKVRAKM 608
            ELE LL++HPE+ D  VIPFPD E G+ P+AY+VR   S+L+E +V +F+AKQVAP+K++R+V F+  +PK+ASGKILR++LI    +K+
Sbjct:  463 ELEALLLTHPEVTDVAVIPFPDREVGQFPMAYIVRKKGSNLSEREVMEFVAKQVAPYKKVRKVAFVTDIPKNASGKILRKDLIKLATSKL 552          
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.751e-24
Identity = 52/83 (62.65%), Postives = 69/83 (83.13%), Query Frame = -1
Query:  360 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELI 608
            ELE LL++HP+ILDA VIPFPD EAG+ P+AYV R P S+L E+ V  FI+KQVAP+K++R+V FI+S+PK+ SGK LR++LI
Sbjct:  461 ELEALLLNHPDILDAAVIPFPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLRKDLI 543          
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.094e-24
Identity = 50/90 (55.56%), Postives = 71/90 (78.89%), Query Frame = -1
Query:  339 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELIAKVRAKM 608
            ELE LL++HPEI DA VIP PD +AG+ P+AY+VR   S+L+E ++  F+AKQV+P+K++R+VTF+ S+PK+ SGKILRREL     +K+
Sbjct:  476 ELEALLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKNPSGKILRRELTKLTTSKL 565          
BLAST of CX069907 vs. ExPASy Swiss-Prot
Match: 4CLL6_ORYSJ (4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 6.653e-24
Identity = 50/88 (56.82%), Postives = 69/88 (78.41%), Query Frame = -1
Query:  345 ELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDVQKFIAKQVAPFKRLRRVTFINSVPKSASGKILRRELIAKVRA 608
            ELE +L S PEI DA V+P+PD EAG++P+A+VVR P + LTE+ V   +AK VAP+K++RRV F+N++PKS +GKILRREL+ +  A
Sbjct:  506 ELEHILQSRPEIADAAVVPYPDEEAGQLPMAFVVRQPGAYLTEQQVMNCVAKHVAPYKKVRRVAFVNAIPKSPAGKILRRELVLQAMA 593          
The following BLAST results are available for this feature:
BLAST of CX069907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
4CLL7_ARATH6.853e-3783.334-coumarate--CoA ligase-like 7 OS=Arabidopsis thal... [more]
4CLL1_ORYSJ3.760e-3585.234-coumarate--CoA ligase-like 1 OS=Oryza sativa sub... [more]
4CLL4_ARATH3.191e-2661.114-coumarate--CoA ligase-like 4 OS=Arabidopsis thal... [more]
4CLL5_ARATH2.068e-2562.654-coumarate--CoA ligase-like 5 OS=Arabidopsis thal... [more]
4CLL3_ARATH2.701e-2558.894-coumarate--CoA ligase-like 3 OS=Arabidopsis thal... [more]
4CLL5_ORYSJ1.026e-2460.244-coumarate--CoA ligase-like 5 OS=Oryza sativa sub... [more]
4CLL4_ORYSJ1.026e-2454.444-coumarate--CoA ligase-like 4 OS=Oryza sativa sub... [more]
4CLL8_ARATH1.751e-2462.654-coumarate--CoA ligase-like 8 OS=Arabidopsis thal... [more]
4CLL2_ARATH5.094e-2455.564-coumarate--CoA ligase-like 2 OS=Arabidopsis thal... [more]
4CLL6_ORYSJ6.653e-2456.824-coumarate--CoA ligase-like 6 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F02-K3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069907 ID=CX069907; Name=CX069907; organism=Citrus sinensis; type=EST; length=608bp
CTTAGATTGAACTTGCAGTAGGTTCTTTTTAACTATCTTCAGTAATGGAA
AGTAATAAATAATTCTTCAAAAAAACAAAAAAAGGAGCGTGTTGGCTAAA
ATAAATAGTGCTCTCATCAAATGCTTCCAATTAGCATTTCAATAAAACCA
AACTTTCTGAGCATTATCCCAATATAATCATCCTAAGTGCTGATATGGGA
ACCATTTATTAGATGATTAATTCTATAAGTTGTAGAATTTCCTATTTATC
CACTCTACCATACCATGAATGAATTTTCACCTCACTCGGAATTATAATAG
TTGGGATACTAGTTGAAAAGTGTAGCATTACTCTTTCACATTTTGGCTCG
TACTTTTGCTATGAGCTCTCTTCTAAGGATTTTCCCAGAAGCTGACTTGG
GAACGCTGTTTATGAATGTCACCCTTCTTAATCTTTTAAAAGGTGCAACC
TGTTTAGCAATAAACTTCTGAACATCTTCTTCAGTCAGTGAACTGTTGGG
TGATCGAACAACATATGCTATTGGGACCTCCCCAGCTTCAGCGTCAGGAA
ATGGAATAACAACAGCATCTAATATCTCAGGGTGAGAAACAAGCAGCCCC
TCAAGCTC
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