CX069905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_CITSI (Putative membrane protein ycf1 OS=Citrus sinensis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 546.969 bits (1408), Expect = 4.748e-155 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = -3 Query: 2 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 820 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL Sbjct: 1504 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 1776
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_GOSHI (Putative membrane protein ycf1 OS=Gossypium hirsutum GN=ycf1 PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 6.765e-85 Identity = 162/273 (59.34%), Postives = 201/273 (73.63%), Query Frame = -3 Query: 2 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 820 D I+P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L Sbjct: 1569 DSLIAPNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHL 1839
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_GOSBA (Putative membrane protein ycf1 OS=Gossypium barbadense GN=ycf1 PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 6.765e-85 Identity = 162/273 (59.34%), Postives = 201/273 (73.63%), Query Frame = -3 Query: 2 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 820 D I+P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L Sbjct: 1566 DSLIAPNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHL 1836
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.108e-78 Identity = 155/273 (56.78%), Postives = 196/273 (71.79%), Query Frame = -3 Query: 5 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLL-VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKN 820 DLF+ +K+ EL N+++EE E A + SDAQ Q LGS+ SNQEKD E+Y SDMK R KKK+ K TEV+L FFLKRYL +QLRW S ++++N++++YC L+RLINP ++AI+SIQRGEMSL ILIT+K L EL K G+LIIEP RLS+KNDGQ +YQ + I+L HK+K KI + Y+EK YV K + D+ IA+H KM NR KN YDLL VPE +L KRRRELR ICFNS+ +NG+ KNPVF NN K G LDK K+ Sbjct: 1555 DLFLFSNEKKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKEYKSNTEVELYFFLKRYLRIQLRWDD--SLNQRMINNIKIYCLLLRLINPREIAISSIQRGEMSLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYREKSYVAKINLDKSIARHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKRNGIHKNPVFCNNVKNWGEFLDKRKH 1825
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.577e-76 Identity = 152/277 (54.87%), Postives = 199/277 (71.84%), Query Frame = -3 Query: 2 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSD--MKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTK--GGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 820 +LFIS +K+ +L N+++EE E A Q SD Q Q L SVLSN EKD EE+Y GSD M+ R KKKQ K TE +LD FLKRYL QLRW S +K++N+++VYC L+RLINP ++ I++IQRGEMSL ++ K L EL K G+ IIEP RLSVKNDGQF +YQ +GI+LVHK+K + +RY+E+ YVD K+ D+F A+ QKM GN++KNHYDLLVPE IL P+RRR+ R LICFN +N++G+ +NPVF NG + LD+NK+L Sbjct: 1564 NLFISSNEKKLLKLENRNQEEKESAGQVDLGSDVQNQGNLESVLSNHEKDIEEDYAGSDSDMQKRTKKKQFKNHTEAELDLFLKRYLLFQLRWDD--SLNQKMINNIKVYCLLLRLINPREICISAIQRGEMSLDLIPVHKDLTLTELMKMKRGIFIIEPIRLSVKNDGQFIMYQTIGISLVHKSKYQTNQRYREERYVDNKNCDKFSARCQKMIGNKDKNHYDLLVPENILSPRRRRKFRILICFNLRNRSGVARNPVFC-NGNSCNKFLDENKHL 1837
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_BUXMI (Putative membrane protein ycf1 OS=Buxus microphylla GN=ycf1-A PE=3 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 7.497e-76 Identity = 150/275 (54.55%), Postives = 196/275 (71.27%), Query Frame = -3 Query: 2 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNG--KGGGRVLDKNKNL 820 DL+I T+K+ EL N+++EE E QG SDAQ LG VLSNQ+KD EE+Y GS++K R KKKQ TE +L+F LKRYL QLRW F ++++N+++VYC L+RLINP +++I+SIQ GEMS I+ +K + EL K G+LIIEP RLS+K DGQF +YQ + I+LVHKNK++ R +EK YVDK FDE IA+H+KM G ++NHY+LLVPE I P+RRRELR ICFNS N+N + +NPVFFN K GR LD+NK+L Sbjct: 1536 DLWIPFTEKKSIELENRNQEEKETRGQGDLGSDAQNHGNLGYVLSNQQKDVEEDYAGSNIKKRRKKKQCTSNTEAELNFLLKRYLLFQLRWDDP--FNQRMINNIKVYCLLLRLINPKEISISSIQSGEMSPDII--QKDLTITELIKKGLLIIEPVRLSIKRDGQFIMYQTISISLVHKNKQQTNGRCREKRYVDKNYFDESIARHEKMVGTGDENHYELLVPENISSPRRRRELRIRICFNSGNKNFVDRNPVFFNENKVKHCGRFLDENKHL 1806
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 6.567e-72 Identity = 147/273 (53.85%), Postives = 190/273 (69.60%), Query Frame = -3 Query: 8 DLFIS--PTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNK 820 D+FIS +K+Y EL Q++ E E ++D + S LSNQEKD EENY S MK KKQS+ E + DF LKRYL QLRW S +K++++++VYC L+R IN ++ IASIQRGE++L +L+ +K F L EL K G+L+IEP RLS KN+GQF +YQ +GI+LVHK+K I +RY+EKG VD K+FDEFI+KHQKMT NR+KNHYDL VPETIL P+ RRELR LICFNS+N+NG+ N F N K VL+K+K Sbjct: 1547 DIFISIFSNEKKYLELEKQNQVEKEYGI----KTDFE------STLSNQEKDIEENYAVSKMKKN--KKQSRTNMEAEFDFLLKRYLLFQLRWDD--SLNKKMIDNIKVYCSLLRPINLREITIASIQRGEINLDLLMIQKNFILTELIKKGILLIEPVRLSRKNEGQFIMYQTIGISLVHKSKHTINQRYREKGLVDTKNFDEFISKHQKMTENRDKNHYDLFVPETILSPRHRRELRILICFNSRNRNGIPSNAFFCNENKVKSPVLNKSK 1805
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_PLAOC (Putative membrane protein ycf1 OS=Platanus occidentalis GN=ycf1 PE=3 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.259e-71 Identity = 141/278 (50.72%), Postives = 193/278 (69.42%), Query Frame = -3 Query: 2 QKEYFELSNQSKEENELADQGTPRSDAQKQVILG----------SVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 799 +K+ EL N+++EE E + QG S+AQ Q LG SVL NQ+K+ EE+Y GSD+K KKKQ K + EV+LD LK+YL QLRW G S ++ILN++++YC L+RLINP ++ I+SIQ+GEMSL I++ K+ EL K G+ IIEP RLS+K DGQF +YQ +GI+LVHK+K + +RY+EK +DK F+ FIA+H+ M GN ++NHYDLLVPE I P+RRRELR L CF+ N N + +NPVF NN K G+ L+++K+L Sbjct: 1585 KKKSLELENRNQEEKESSSQGDLGSNAQNQGNLGPNAQNQGNLGSVLPNQQKNLEEDYAGSDIKKVRKKKQFKSKAEVELDLLLKKYLLFQLRWNG--SLNQRILNNIKIYCFLLRLINPKEITISSIQKGEMSLGIMLIKRDLTFTELIKRGIFIIEPVRLSIKWDGQFIMYQTIGISLVHKSKHQTNQRYREKRCIDKNHFEGFIARHENMLGNGDENHYDLLVPENISSPRRRRELRILTCFHFLNGNVLDRNPVFCNGNNVKNCGQFLNEDKHL 1860
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_DRIGR (Putative membrane protein ycf1 OS=Drimys granadensis GN=ycf1 PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 5.560e-71 Identity = 140/275 (50.91%), Postives = 191/275 (69.45%), Query Frame = -3 Query: 2 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 820 DL IS QKEY EL N++KE+ E QG RSDA+ Q L S N++K E++Y SD+K R KK++ K E +L+FFLKRYL QLRW S ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ K L EL K G+ IIEP RLS+K DGQF +YQ +GI+L+HK+K + + +EK YVD+ FD IA+H KM N ++NHYDLL+ E IL P+RRR LR L+CFNS N+N + NP+FF NN + G+ LD++K L Sbjct: 1533 DLRISSNQKEYLELENRNKEK-EQPGQGDIRSDARNQENLESDAQNKKKYVEKDYAESDIKKRRKKRKYKSNKEAELEFFLKRYLLFQLRWDD--SLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIHKDLTLTELIKRGIFIIEPARLSIKRDGQFIMYQTIGISLIHKSKHQTNRECREKKYVDENSFDGSIAQHGKMLVNGDENHYDLLISENILSPRRRRNLRILMCFNSSNENIVDINPIFFNENNVRNSGQFLDEDKCL 1804
BLAST of CX069905 vs. ExPASy Swiss-Prot
Match: YCF1_CALFG (Putative membrane protein ycf1 OS=Calycanthus floridus var. glaucus GN=ycf1 PE=3 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 7.261e-71 Identity = 144/275 (52.36%), Postives = 192/275 (69.82%), Query Frame = -3 Query: 2 DLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 820 +L IS QK+Y EL N+++EE E QG SD Q NQ+KD E++Y SD+K R KK+QSK +L FFLKRYL QLRW ++ ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ +K L EL K G+LIIEP RLS+K DGQF +YQ +GI+LVHKNK + +RY+EK YVD+ FD IA+H KM NR +N YDLLVPE IL P+RRRELR LI FNS N+N + +N VFF NN K G+ LD++K++ Sbjct: 1512 ELPISSNQKDYLELENRNQEEKEEFGQGNLGSDTQ----------NQQKDVEKDYAKSDIKKRGKKRQSKSNKGAELQFFLKRYLLFQLRWDDPLN--QRMMNNVKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVRLSIKWDGQFIMYQTIGISLVHKNKHQTNRRYREKRYVDENYFDGSIAQHGKMLVNRAENDYDLLVPENILSPRRRRELRILISFNSGNRNVVDRNLVFFNGNNVKNFGQFLDEDKHI 1774 The following BLAST results are available for this feature:
BLAST of CX069905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069905 ID=CX069905; Name=CX069905; organism=Citrus sinensis; type=EST; length=822bpback to top |