CX069886

Overview
NameCX069886
Unique NameCX069886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2624 contig Csv1_Contig2624:139..624. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF3_HEVBR (Profilin-3 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 5.253e-53
Identity = 97/120 (80.83%), Postives = 105/120 (87.50%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDGHHLT+AAI+GHDGSVWAQSS+FPQFKPEE+AAIMKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR              QALI GIYDEPLTPGQCNMIVERLGDYL++QG+
Sbjct:   12 MCDIDGHHLTAAAIIGHDGSVWAQSSSFPQFKPEEVAAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVERLGDYLLEQGM 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_PYRCO (Profilin OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 7.586e-52
Identity = 97/120 (80.83%), Postives = 103/120 (85.83%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDGHHLT+AAI+GHDGSVWAQSS FP+FKPEEI AIMKDF+EPGSLAPTGLHLGGTKYMVIQGE GAVIR              QAL+FGIY+EPLTPGQCNMIVERLGDYLIDQGL
Sbjct:   12 MCDIDGHHLTAAAILGHDGSVWAQSSTFPKFKPEEITAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTSQALVFGIYEEPLTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF6_HEVBR (Profilin-6 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.207e-51
Identity = 95/120 (79.17%), Postives = 103/120 (85.83%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDGH LT+AAI+GHDGSVWAQSS+FPQFK +E+AA+MKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR              QALI GIYDEPLTPGQCNMIVERLGDYL+DQGL
Sbjct:   12 MCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAVMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVERLGDYLLDQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF1_MALDO (Profilin-1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 2.882e-51
Identity = 96/120 (80.00%), Postives = 102/120 (85.00%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDGHHLT+AAI+GHDGSVWA SS FP+FKPEEI AIMKDF+EPGSLAPTGLHLGGTKYMVIQGE GAVIR              QAL+FGIY+EPLTPGQCNMIVERLGDYLIDQGL
Sbjct:   12 MCDIDGHHLTAAAILGHDGSVWAHSSTFPKFKPEEITAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTGQALVFGIYEEPLTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_LITCN (Profilin OS=Litchi chinensis PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 3.765e-51
Identity = 94/120 (78.33%), Postives = 102/120 (85.00%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+ DG HLT+AAI+GHDGSVWAQS+NFPQFKP EIAAIMKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR              QALI GIYDEP+TPGQCNM+VERLGDYL+DQGL
Sbjct:   12 MCETDGQHLTAAAIIGHDGSVWAQSANFPQFKPAEIAAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGPGGITVKKTTQALIIGIYDEPMTPGQCNMVVERLGDYLVDQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF5_HEVBR (Profilin-5 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.431e-50
Identity = 93/120 (77.50%), Postives = 102/120 (85.00%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDGH LT+AAI+GHDGSVWAQSS FPQFK +E+AA+MKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR              QALI GIYDEPLTPGQCNMIVERLGDYL++QG+
Sbjct:   12 MCDIDGHRLTAAAIIGHDGSVWAQSSGFPQFKSDEVAAVMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVERLGDYLLEQGM 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF4_HEVBR (Profilin-4 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 4.162e-50
Identity = 93/120 (77.50%), Postives = 102/120 (85.00%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDGH LT+AAI+GHDGSVWAQSS+FPQFK +E+AAIMKDF+EPGSLAPTGLHLG TKYMVIQGEPGAVIR              QALI GIYDEPLTPGQCNMIVERLGDYL++QG+
Sbjct:   12 MCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAIMKDFDEPGSLAPTGLHLGSTKYMVIQGEPGAVIRGKKGSGGITVKKTSQALIIGIYDEPLTPGQCNMIVERLGDYLLEQGM 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF1_RICCO (Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.025e-48
Identity = 93/120 (77.50%), Postives = 99/120 (82.50%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+I+G+HLTSAAI+G DGSVWAQSS FPQFKPEEI AIM DF EPGSLAPTGL+L GTKYMVIQGEPGAVIR              QALI GIYDEP+TPGQCNMIVERLGDYLIDQGL
Sbjct:   12 MCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSLAPTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROFX_ORYSJ (Profilin LP04 OS=Oryza sativa subsp. japonica GN=Os06g0152100 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 8.679e-48
Identity = 90/119 (75.63%), Postives = 98/119 (82.35%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 358
            MC+IDG+HLT+AAIVGHDGSVWAQS NFPQ+KPEEI  IMKDF+EPGSLAPTGL LGGTKYMVIQGEPG VIR               +LI GIYDEP+TPGQCNMIVERLGDYLI+QG
Sbjct:   12 MCEIDGNHLTAAAIVGHDGSVWAQSPNFPQYKPEEITGIMKDFDEPGSLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGICVKKTGLSLILGIYDEPMTPGQCNMIVERLGDYLIEQG 130          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROFX_ORYSI (Profilin LP04 OS=Oryza sativa subsp. indica GN=OsI_020954 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 8.679e-48
Identity = 90/119 (75.63%), Postives = 98/119 (82.35%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 358
            MC+IDG+HLT+AAIVGHDGSVWAQS NFPQ+KPEEI  IMKDF+EPGSLAPTGL LGGTKYMVIQGEPG VIR               +LI GIYDEP+TPGQCNMIVERLGDYLI+QG
Sbjct:   12 MCEIDGNHLTAAAIVGHDGSVWAQSPNFPQYKPEEITGIMKDFDEPGSLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGICVKKTGLSLILGIYDEPMTPGQCNMIVERLGDYLIEQG 130          
The following BLAST results are available for this feature:
BLAST of CX069886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PROF3_HEVBR5.253e-5380.83Profilin-3 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF_PYRCO7.586e-5280.83Profilin OS=Pyrus communis PE=1 SV=1[more]
PROF6_HEVBR2.207e-5179.17Profilin-6 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF1_MALDO2.882e-5180.00Profilin-1 OS=Malus domestica PE=1 SV=1[more]
PROF_LITCN3.765e-5178.33Profilin OS=Litchi chinensis PE=1 SV=1[more]
PROF5_HEVBR1.431e-5077.50Profilin-5 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF4_HEVBR4.162e-5077.50Profilin-4 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF1_RICCO1.025e-4877.50Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1[more]
PROFX_ORYSJ8.679e-4875.63Profilin LP04 OS=Oryza sativa subsp. japonica GN=O... [more]
PROFX_ORYSI8.679e-4875.63Profilin LP04 OS=Oryza sativa subsp. indica GN=OsI... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E03-I5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069886 ID=CX069886; Name=CX069886; organism=Citrus sinensis; type=EST; length=486bp
GATGTGCGATATCGACGGCCATCATCTCACCTCAGCTGCGATCGTCGGTC
ACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCCTCAGTTCAAGCCT
GAAGAGATTGCTGCAATCATGAAAGATTTTGAAGAGCCCGGTTCTCTTGC
CCCAACTGGTTTGCACCTTGGAGGCACCAAGTACATGGTAATCCAGGGTG
AGCCTGGAGCTGTGATTCGTGGAAAAAAGGGTTCTGGTGGTGTCACCGTC
AAGAAAACGGGCCAAGCCCTGATTTTTGGTATATACGATGAACCATTGAC
TCCAGGACAGTGCAACATGATCGTTGAGAGGTTGGGGGATTATCTCATTG
ATCAGGGCCTGTAGATTCCATGTCAACTTCAAATGGTTTCGATATATTGC
TTTCTGGTTTTCGGGCTTTGCCTCTTCTTCCATATTTGGTCTTGAACTGG
CAGTATAAATTTGTTTGCTGCAAAAATAACTGTGTG
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