CX069885

Overview
NameCX069885
Unique NameCX069885
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2624 contig Csv1_Contig2624:140..780. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF3_HEVBR (Profilin-3 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.847e-53
Identity = 98/120 (81.67%), Postives = 106/120 (88.33%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDIDGHHLT+AAI+GHDGSVWAQSS+FPQFKPEE+AAIMKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR             GQALI GIYDEPLTPGQCNMIVERLGDYL++QG+
Sbjct:   12 MCDIDGHHLTAAAIIGHDGSVWAQSSSFPQFKPEEVAAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVERLGDYLLEQGM 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_PYRCO (Profilin OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.422e-51
Identity = 97/120 (80.83%), Postives = 103/120 (85.83%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDIDGHHLT+AAI+GHDGSVWAQSS FP+FKPEEI AIMKDF+EPGSLAPTGLHLGGTKYMVIQGE GAVIR              QAL+FGIY+EPLTPGQCNMIVERLGDYLIDQGL
Sbjct:   12 MCDIDGHHLTAAAILGHDGSVWAQSSTFPKFKPEEITAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTSQALVFGIYEEPLTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF6_HEVBR (Profilin-6 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51
Identity = 96/120 (80.00%), Postives = 104/120 (86.67%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDIDGH LT+AAI+GHDGSVWAQSS+FPQFK +E+AA+MKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR             GQALI GIYDEPLTPGQCNMIVERLGDYL+DQGL
Sbjct:   12 MCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAVMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVERLGDYLLDQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_MALDO (Profilin-1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.403e-51
Identity = 97/120 (80.83%), Postives = 103/120 (85.83%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDIDGHHLT+AAI+GHDGSVWA SS FP+FKPEEI AIMKDF+EPGSLAPTGLHLGGTKYMVIQGE GAVIR             GQAL+FGIY+EPLTPGQCNMIVERLGDYLIDQGL
Sbjct:   12 MCDIDGHHLTAAAILGHDGSVWAHSSTFPKFKPEEITAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTGQALVFGIYEEPLTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_LITCN (Profilin OS=Litchi chinensis PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.056e-51
Identity = 94/120 (78.33%), Postives = 102/120 (85.00%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+ DG HLT+AAI+GHDGSVWAQS+NFPQFKP EIAAIMKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR              QALI GIYDEP+TPGQCNM+VERLGDYL+DQGL
Sbjct:   12 MCETDGQHLTAAAIIGHDGSVWAQSANFPQFKPAEIAAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGPGGITVKKTTQALIIGIYDEPMTPGQCNMVVERLGDYLVDQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF5_HEVBR (Profilin-5 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.681e-50
Identity = 94/120 (78.33%), Postives = 103/120 (85.83%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDIDGH LT+AAI+GHDGSVWAQSS FPQFK +E+AA+MKDF+EPGSLAPTGLHLGGTKYMVIQGEPGAVIR             GQALI GIYDEPLTPGQCNMIVERLGDYL++QG+
Sbjct:   12 MCDIDGHRLTAAAIIGHDGSVWAQSSGFPQFKSDEVAAVMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVERLGDYLLEQGM 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF4_HEVBR (Profilin-4 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.802e-50
Identity = 93/120 (77.50%), Postives = 102/120 (85.00%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDIDGH LT+AAI+GHDGSVWAQSS+FPQFK +E+AAIMKDF+EPGSLAPTGLHLG TKYMVIQGEPGAVIR              QALI GIYDEPLTPGQCNMIVERLGDYL++QG+
Sbjct:   12 MCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAIMKDFDEPGSLAPTGLHLGSTKYMVIQGEPGAVIRGKKGSGGITVKKTSQALIIGIYDEPLTPGQCNMIVERLGDYLLEQGM 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_RICCO (Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.922e-48
Identity = 93/120 (77.50%), Postives = 99/120 (82.50%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+I+G+HLTSAAI+G DGSVWAQSS FPQFKPEEI AIM DF EPGSLAPTGL+L GTKYMVIQGEPGAVIR              QALI GIYDEP+TPGQCNMIVERLGDYLIDQGL
Sbjct:   12 MCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSLAPTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROFX_ORYSJ (Profilin LP04 OS=Oryza sativa subsp. japonica GN=Os06g0152100 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.627e-47
Identity = 91/119 (76.47%), Postives = 99/119 (83.19%), Query Frame = -1
Query:  285 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 641
            MC+IDG+HLT+AAIVGHDGSVWAQS NFPQ+KPEEI  IMKDF+EPGSLAPTGL LGGTKYMVIQGEPG VIR             G +LI GIYDEP+TPGQCNMIVERLGDYLI+QG
Sbjct:   12 MCEIDGNHLTAAAIVGHDGSVWAQSPNFPQYKPEEITGIMKDFDEPGSLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGICVKKTGLSLILGIYDEPMTPGQCNMIVERLGDYLIEQG 130          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROFX_ORYSI (Profilin LP04 OS=Oryza sativa subsp. indica GN=OsI_020954 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.627e-47
Identity = 91/119 (76.47%), Postives = 99/119 (83.19%), Query Frame = -1
Query:  285 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 641
            MC+IDG+HLT+AAIVGHDGSVWAQS NFPQ+KPEEI  IMKDF+EPGSLAPTGL LGGTKYMVIQGEPG VIR             G +LI GIYDEP+TPGQCNMIVERLGDYLI+QG
Sbjct:   12 MCEIDGNHLTAAAIVGHDGSVWAQSPNFPQYKPEEITGIMKDFDEPGSLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGICVKKTGLSLILGIYDEPMTPGQCNMIVERLGDYLIEQG 130          
The following BLAST results are available for this feature:
BLAST of CX069885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PROF3_HEVBR9.847e-5381.67Profilin-3 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF_PYRCO1.422e-5180.83Profilin OS=Pyrus communis PE=1 SV=1[more]
PROF6_HEVBR4.137e-5180.00Profilin-6 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF1_MALDO5.403e-5180.83Profilin-1 OS=Malus domestica PE=1 SV=1[more]
PROF_LITCN7.056e-5178.33Profilin OS=Litchi chinensis PE=1 SV=1[more]
PROF5_HEVBR2.681e-5078.33Profilin-5 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF4_HEVBR7.802e-5077.50Profilin-4 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF1_RICCO1.922e-4877.50Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1[more]
PROFX_ORYSJ1.627e-4776.47Profilin LP04 OS=Oryza sativa subsp. japonica GN=O... [more]
PROFX_ORYSI1.627e-4776.47Profilin LP04 OS=Oryza sativa subsp. indica GN=OsI... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E03-I5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069885 ID=CX069885; Name=CX069885; organism=Citrus sinensis; type=EST; length=641bp
TTTTGAGTATCAACAGTATCCAAAGATTCAAATTCTTCAAAACTGCAATA
CACATAAATTAAGGAAACATGAAGGAATTGGGGATGAAAAAAAAAGATAA
AAAAGGAACCCTAAAGAACCAAAAGAGGCGGGAAAAAAAAAAATCACTCT
TGTCCTCACACAGTTATTTTTGCAGCAAACAAATTTATACTGCCAGTTCA
AGACCAAATATGGAAGAAGAGGCAAAGCCCGAAAACCAGAAAGCAATATA
TCGAAACCATTTGAAGTTGACATGGAATCTACAGGCCCTGATCAATGAGA
TAATCCCCCAACCTCTCAACGATCATGTTGCACTGTCCTGGAGTCAATGG
TTCATCGTATATACCAAAAATCAGGGCTTGGCCCGTTTTCTTGACGGTGA
CACCACCAGAACCCTTTTTTCCACGAATCACAGCTCCAGGCTCACCCTGG
ATTACCATGTACTTGGTGCCTCCAAGGTGCAAACCAGTTGGGGCAAGAGA
ACCGGGCTCTTCAAAATCTTTCATGATTGCAGCAATCTCTTCAGGCTTGA
ACTGAGGGAAATTGGAGCTCTGGGCCCAAACGCTGCCGTCGTGACCGACG
ATCGCAGCTGAGGTGAGATGATGGCCGTCGATATCGCACAT
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