EY720877

Overview
NameEY720877
Unique NameEY720877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720877 vs. ExPASy Swiss-Prot
Match: ODP2_STAEQ (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.308e-15
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 1
Query:  172 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 351
            L   GEGI E E++KWF+K GD IEE   L  VQ+DK+ +EI S   G V ++L   G +
Sbjct:    7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66          

HSP 2 Score: 45.8246 bits (107), Expect = 4.308e-15
Identity = 25/88 (28.41%), Postives = 42/88 (47.73%), Query Frame = 3
Query:  390 VKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEET 653
            V+   S      K   D    V A P+VR  A+  G+N+  V+ +GK+GR+ KED+  Y     + +G +T++ S      ++    T
Sbjct:  106 VQEEASSTQSQEKTEVDESKTVKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGSNTSAASESTSSDVVNASAT 193          
BLAST of EY720877 vs. ExPASy Swiss-Prot
Match: ODP2_STAES (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhC PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.450e-15
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 1
Query:  172 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 351
            L   GEGI E E++KWF+K GD IEE   L  VQ+DK+ +EI S   G V ++L   G +
Sbjct:    7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66          

HSP 2 Score: 44.669 bits (104), Expect = 9.450e-15
Identity = 25/88 (28.41%), Postives = 41/88 (46.59%), Query Frame = 3
Query:  390 VKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEET 653
            V+   S      K   D    V A P+VR  A+  G+N+  V+ +GK+GR+ KED+  Y     + +G +T+  S      ++    T
Sbjct:  106 VQEEASSTQSQEKTEVDESKTVKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGSNTSVASESTSSDVVNASAT 193          
BLAST of EY720877 vs. ExPASy Swiss-Prot
Match: ODB2_PSEPU (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex OS=Pseudomonas putida GN=bkdB PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.548e-13
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  166 VPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIV 354
            + +   GEGIA+ EL++WFVK GD I E Q +  V +DKAT+EI S   GKV  L   PG ++
Sbjct:    6 IKMPDIGEGIAQVELVEWFVKVGDIIAEDQVVADVMTDKATVEIPSPVSGKVLALGGQPGEVM 68          

HSP 2 Score: 31.5722 bits (70), Expect = 2.548e-13
Identity = 22/78 (28.21%), Postives = 34/78 (43.59%), Query Frame = 3
Query:  360 PTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADG 593
            P P  DV  +     + +     + +      LA+P VR  A   GI L  V  +G  GR+L ED+  +  +  +A G
Sbjct:  105 PEPQKDVKPAAYQASASHEAAPIVPRQPGDKPLASPAVRKRALDAGIELRYVHGSGPAGRILHEDLDAFMSKPQSAAG 182          

HSP 3 Score: 24.6386 bits (52), Expect = 2.548e-13
Identity = 16/49 (32.65%), Postives = 21/49 (42.86%), Query Frame = 1
Query:  700 QFP*XGFXXNMVXTMSMAXQNT-HFHYVEEINCDALVKL*ASFQNNNSD 843
            Q P  G    +   M  A +   HF YVEEI+  AL  L     + + D
Sbjct:  196 QVPVIGLRRKIAQRMQDAKRRVAHFSYVEEIDVTALEALRQQLNSKHGD 244          
BLAST of EY720877 vs. ExPASy Swiss-Prot
Match: OPD23_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 8.022e-13
Identity = 33/89 (37.08%), Postives = 47/89 (52.81%), Query Frame = 3
Query:  360 PTPSSDVLESVKPPGSENSPD-SKLNKDTVGG-VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQ--KGAADGPSTASVS 614
            PTP+    E VK P S   P  SK +    G  V A+P  R LA+   + L D++ TG +GR++K D+ +Y     KGA   PS ++ S
Sbjct:  214 PTPAPPKEEKVKQPSSPPEPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKADIDEYLASSGKGATAKPSKSTDS 302          

HSP 2 Score: 45.4394 bits (106), Expect = 8.022e-13
Identity = 22/71 (30.99%), Postives = 41/71 (57.75%), Query Frame = 1
Query:  136 ADLPASGIVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGN 348
            +DLP    + +P       + E  + +W  KEGD++   + LC V++DKAT+E+    +G +A+++ A G+
Sbjct:  106 SDLPPHQEIGMP--SLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKAEGS 174          
BLAST of EY720877 vs. ExPASy Swiss-Prot
Match: ODP2_ECOLI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Escherichia coli (strain K12) GN=aceF PE=1 SV=3)

HSP 1 Score: 46.595 bits (109), Expect = 5.204e-11
Identity = 25/74 (33.78%), Postives = 39/74 (52.70%), Query Frame = 3
Query:  345 QHCKVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY 566
            Q    P P++        P ++    S+  ++    V ATP +R LA+ +G+NL  V  TG+ GR+L+EDV  Y
Sbjct:  292 QEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAY-VHATPLIRRLAREFGVNLAKVKGTGRKGRILREDVQAY 364          

HSP 2 Score: 41.9726 bits (97), Expect = 5.204e-11
Identity = 26/76 (34.21%), Postives = 42/76 (55.26%), Query Frame = 1
Query:  130 ALADLPASGIVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVK 357
            A A  PA+G+ +V +   G    E E+ +  VK GD++   Q L  V+ DKA++E+ + + G V +L    G+ VK
Sbjct:  197 AAAPAPAAGVKEVNVPDIGGD--EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVK 270          
The following BLAST results are available for this feature:
BLAST of EY720877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ODP2_STAEQ4.308e-1546.67Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAES9.450e-1546.67Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODB2_PSEPU2.548e-1347.62Lipoamide acyltransferase component of branched-ch... [more]
OPD23_ARATH8.022e-1337.08Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_ECOLI5.204e-1133.78Dihydrolipoyllysine-residue acetyltransferase comp... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-E08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720877 ID=EY720877; Name=EY720877; organism=Citrus sinensis; type=EST; length=848bp
CACGCGTCCGGTTGTGAAAATTTTGTTCTCGTATATATTATTTTCAAATC
TCTCCTGTCCTTTTATTTTTTGTGTATCTTTTAGTTGGAAATGCCCTCTA
TGGTTAGTAGATGTTGCTATTCAAATCATGCTTTGGCTGATCTTCCGGCT
AGTGGGATAGTTGATGTACCCTTAGCACAAACTGGTGAAGGAATTGCTGA
GTGTGAACTTCTCAAATGGTTTGTAAAAGAGGGGGATGAAATTGAAGAAT
TTCAACCACTATGTGCAGTTCAGAGTGACAAAGCAACAATTGAAATAACA
AGTCGTTACAAAGGAAAAGTTGCTCAACTTCTCCATGCTCCTGGCAACAT
TGTAAAGTTCCAACCCCAAGTTCTGATGTCTTGGAAAGTGTGAAACCTCC
AGGGTCAGAAAATTCACCTGATTCTAAGCTGAATAAAGATACAGTTGGTG
GAGTTCTAGCTACACCTACTGTCCGGAACCTTGCCAAGCTATATGGAATA
AACTTATATGACGTCGATGCAACTGGTAAAGATGGGAGAGTTTTAAAAGA
AGATGTGCTTAAGTATGCTGTACAGAAAGGAGCTGCTGATGGCCCATCTA
CTGCCTCTGTAAGTGCTGATTGTAGAGAGCAGCTTTTAGGAGAAGAAGAG
ACCTACCCACAAACATTTGCTGAAGTTTAATGGTACCCTGATGATAAGAC
AGTTCCCTTGANGGGGTTTCCANNAGAACATGGTCANAACAATGTCCATG
GCTGNNCAAAATACGCATTTTCATTATGTAGAAGAGATAAATTGTGATGC
TCTTGTGAAGCTTTAGGCATCTTTTCAAAATAATAATTCTGACCCAAA
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