CX069836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069836 vs. ExPASy Swiss-Prot
Match: LTRA_LACLM (Group II intron-encoded protein ltrA OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=ltrA PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.136e-25 Identity = 71/183 (38.80%), Postives = 103/183 (56.28%), Query Frame = -3 Query: 191 KK*GSKFRPLTVVLPIEKIMKEAIRMVLESIYDPEFPDTSH-FRSGRGCHSVLRRIKEEWGISRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPKFFYPIQKVFSAGRLVGGE--KGPYSVPHSVLLSALPGNIYLHKLDQEIGRIRQKYEIPIVQRI----RSVLLRTGRIDDQEKENSGED 718 KK K RPL + +K+++EA+R++LESIY+P F D SH FR R CH+ L+ IK E+G +RWF+E DI+ CF ID LI + +I D K I K AG L + K P +LS L NIYLH+LD+ + +++ K++ +RI R + RI + K+ GE+ Sbjct: 91 KKNSKKMRPLGIPTFTDKLIQEAVRIILESIYEPVFEDVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCFDNIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYSGTPQGGILSPLLANIYLHELDKFVLQLKMKFDRESPERITPEYRELHNEIKRISHRLKKLEGEE 273
BLAST of CX069836 vs. ExPASy Swiss-Prot
Match: LTRA_LACLC (Group II intron-encoded protein ltrA OS=Lactococcus lactis subsp. cremoris GN=ltrA PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.136e-25 Identity = 71/183 (38.80%), Postives = 103/183 (56.28%), Query Frame = -3 Query: 191 KK*GSKFRPLTVVLPIEKIMKEAIRMVLESIYDPEFPDTSH-FRSGRGCHSVLRRIKEEWGISRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPKFFYPIQKVFSAGRLVGGE--KGPYSVPHSVLLSALPGNIYLHKLDQEIGRIRQKYEIPIVQRI----RSVLLRTGRIDDQEKENSGED 718 KK K RPL + +K+++EA+R++LESIY+P F D SH FR R CH+ L+ IK E+G +RWF+E DI+ CF ID LI + +I D K I K AG L + K P +LS L NIYLH+LD+ + +++ K++ +RI R + RI + K+ GE+ Sbjct: 91 KKNSKKMRPLGIPTFTDKLIQEAVRIILESIYEPVFEDVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCFDNIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYSGTPQGGILSPLLANIYLHELDKFVLQLKMKFDRESPERITPEYRELHNEIKRISHRLKKLEGEE 273
BLAST of CX069836 vs. ExPASy Swiss-Prot
Match: YMC6_SCHPO (Uncharacterized 91 kDa protein in cob intron OS=Schizosaccharomyces pombe GN=SPMIT.06 PE=4 SV=4) HSP 1 Score: 102.834 bits (255), Expect = 2.444e-21 Identity = 55/145 (37.93%), Postives = 87/145 (60.00%), Query Frame = -3 Query: 275 RPLTVVLPIEKIMKEAIRMVLESIYDPEFPDTSH-FRSGRGCHSVLRRIKEEWGISRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPKFFYPIQKVFSAGRLVGGEKGPYSV---PHSVLLSALPGNIYLHKLDQEIGRIRQKYE 697 RPLT+ P +K+++E +R+VLE+IY+P F SH FR GR CHS LR I + W++E DI+ CF +I +LI + +I D +F I+K +AG L + Y + P ++S + NIYLH+LD+ I ++ +++ Sbjct: 308 RPLTIGSPRDKLVQEILRIVLEAIYEPLFNTASHGFRPGRSCHSALRSIFTNFKGCTWWIEGDIKACFDSIPHDKLIALLSSKIKDQRFIQLIRKALNAGYLT-ENRYKYDIVGTPQGSIVSPILANIYLHQLDEFIENLKSEFD 451
BLAST of CX069836 vs. ExPASy Swiss-Prot
Match: YMF40_MARPO (Uncharacterized mitochondrial protein ymf40 OS=Marchantia polymorpha GN=YMF40 PE=4 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.651e-17 Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = -3 Query: 278 KFRPLTVVLPIEKIMKEAIRMVLESIYDPEFPDTSH-FRSGRGCHSVLRRIKEEWGISRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPKFFYPIQKVFSAGRLVGGEKGPY---SVPHSVLLSALPGNIYLHKLDQEIGRIRQKY 703 K R L + P +KI++E +R +LE +++P F D+SH FR R H+ LR+I+ W + W +E DI+ F ID H L E + D + K+ AG + G+ P+ VP +LS L NIYLH+ D + I+ KY Sbjct: 74 KLRSLGIPSPRDKIVQEVMRRILEPVFEPRFLDSSHGFRPHRSPHTALRQIR-RWTGTSWMIEGDIKGYFDNIDHHLLAGFIAELVKDQRLLALYWKLVRAGYVNQGKAEPHLLTGVPQGRILSPLLSNIYLHQFDLFMEEIKVKY 218
BLAST of CX069836 vs. ExPASy Swiss-Prot
Match: AI1M_YEAST (Putative COX1/OXI3 intron 1 protein OS=Saccharomyces cerevisiae GN=aI1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.830e-15 Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = -3 Query: 308 RPLTVVLPIEKIMKEAIRMVLESIYDPEFPDTSH-FRSGRGCHSVLRRIKEEWGISRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPKFFYPIQKVFSAGRLVGGEKGPY-----SVPHSVLLSALPGNIYLHKLD 697 RPL+V P +KI++E +RM+L++I+D + SH FR C + + ++ +G S WF+E D++KCF TI +I K I D F + K+ AG + EKG Y +P L+S + NI + +D Sbjct: 323 RPLSVGNPRDKIVQEVMRMILDTIFDKKMSTHSHGFRKNMSCQTAIWEVRNMFGGSNWFIEVDLKKCFDTISHDLIIKELKRYISDKGFIDLVYKLLRAGYI--DEKGTYHKPMLGLPQGSLISPILCNIVMTLVD 456
BLAST of CX069836 vs. ExPASy Swiss-Prot
Match: AI2M_YEAST (Putative COX1/OXI3 intron 2 protein OS=Saccharomyces cerevisiae GN=aI2 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.944e-15 Identity = 58/193 (30.05%), Postives = 90/193 (46.63%), Query Frame = -3 Query: 191 FRPLTVVLPIEKIMKEAIRMVLESIYDPEFPDTSH-FRSGRGCHSVLRRIKEEWGISRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPKFFYPIQKVFSAGRLVGG---EKGPYSVPHSVLLSALPGNIYLHKLDQEI----------GRIRQKYEIPIVQRIRSVL---------LRTGRIDDQEKENSGED 700 FRPL+V P EKI++E++RM+LE IY+ F SH FR C + + + K WF++ D+ KCF TI + LI + E I D F + K+ AG + +P ++S + NI+L KLD+ + G + + PI + S + L+ R+ D + N G D Sbjct: 355 FRPLSVGNPREKIVQESMRMMLEIIYNNSFSYYSHGFRPNLSCLTAIIQCKNYMQYCNWFIKVDLNKCFDTIPHNMLINVLNERIKDKGFMDLLYKLLRAGYVDKNNNYHNTTLGIPQGSVVSPILCNIFLDKLDKYLENKFENEFNTGNMSNRGRNPIYNSLSSKIYRCKLLSEKLKLIRLRDHYQRNMGSD 547
BLAST of CX069836 vs. ExPASy Swiss-Prot
Match: YMF11_MARPO (Uncharacterized mitochondrial protein ymf11 OS=Marchantia polymorpha GN=YMF11 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.670e-11 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = -3 Query: 284 IMKEAIRMVLESIYDPEFPDTSH-FRSGRGCHSVLRRIKEEWGISRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPKFFYPIQKVFSAGRLVGGEKGPYSVPHSVLLSALPGNIYLHKLDQEIGRIRQ 664 +++E IR +LE++Y+P F SH FR GR H+ L++I+ ++ + WF+E + + F+ ID+ LI + + I D +F +QK G E + L NI LH+LD + R+++ Sbjct: 246 LVQEVIRSILETLYEPYFLSCSHGFRPGRSQHTCLKQIRRDFVGTVWFIEGETSQYFNKIDKQVLIGLMRRRIRDNRFLNLVQKEIKTSLRAGAE--------GTGVGPLLCNIVLHELDLFVMRLKR 365 The following BLAST results are available for this feature:
BLAST of CX069836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069836 ID=CX069836; Name=CX069836; organism=Citrus sinensis; type=EST; length=837bpback to top |