EY720328

Overview
NameEY720328
Unique NameEY720328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6145 contig Csv1_Contig6145:9..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_HEVBR (Superoxide dismutase [Mn], mitochondrial OS=Hevea brasiliensis GN=SODA PE=2 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.203e-103
Identity = 183/231 (79.22%), Postives = 197/231 (85.28%), Query Frame = 2
Query:   62 MALRSLAIRKAI--GLGKSVGLG-LRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVYHKECP 745
            MALRSL  RK +      + GLG LRGLQT +LPDLPYDY ALEPAISGEIMQLHHQKHHQ Y+TNYNKA+EQL  A+ K D++ VV+LQ AIKFNGGGHVNHSIFWKNLAPV EGGGE PH SLGWAID  FGSLE LIQ M+AEGAALQGSGWVWL LD E K+LVVETTANQDPLVTK PTLVPLLGIDVWEHAYYL YKNV+PDYLKNIW VM+WKYAS+VY KECP
Sbjct:    1 MALRSLVTRKNLPSAFKAATGLGQLRGLQTFSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKALEQLNDAIEKGDSAAVVKLQSAIKFNGGGHVNHSIFWKNLAPVREGGGELPHGSLGWAIDADFGSLEKLIQLMNAEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYAKECP 231          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_NICPL (Superoxide dismutase [Mn], mitochondrial OS=Nicotiana plumbaginifolia GN=SODA PE=1 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 3.501e-103
Identity = 174/228 (76.32%), Postives = 194/228 (85.09%), Query Frame = 2
Query:   62 MALRSLAIRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVYHKECP 745
            MALR+L  R+ +  G      LRGLQT +LPDLPYDY ALEPAISG+IMQLHHQ HHQ YVTNYNKA+EQL  A++K D  TV +L  AIKFNGGGH+NHSIFWKNLAPV EGGGEPP  SLGWAIDT+FGSLEAL+QKM+AEGAALQGSGWVWLG+D E KRLV+ETTANQDPLV+K   LVPLLGIDVWEHAYYL YKNV+PDYLKNIW VM+WKYA++VY KECP
Sbjct:    1 MALRTLVSRRTLATGLGFRQQLRGLQTFSLPDLPYDYGALEPAISGDIMQLHHQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGHINHSIFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLGVDKELKRLVIETTANQDPLVSKGANLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYANEVYEKECP 228          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_PRUPE (Superoxide dismutase [Mn], mitochondrial OS=Prunus persica GN=SOD PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 1.019e-102
Identity = 175/228 (76.75%), Postives = 194/228 (85.09%), Query Frame = 2
Query:   62 MALRSLAIRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVYHKECP 745
            MALR+L  R+ +  G      LRGLQT +LPDLPY+Y ALEPAISG+IMQLHHQ HHQ YVTNYNKA+EQL  A++K D  TV +L  AIKFNGGGH+NHSIFWKNLAPV EGGGEPP  SLGWAIDT+FGSLEAL+QKM+AEGAALQGSGWVWL LD E K+LVVETTANQDPLVTK PTLVPLLGIDVWEHAYYL YKNV+PDYLKNIW V++WKYAS+VY KE P
Sbjct:    1 MALRTLVSRRTLATGLGFRQQLRGLQTFSLPDLPYNYGALEPAISGDIMQLHHQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGHINHSIFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKESP 228          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_CAPAN (Superoxide dismutase [Mn], mitochondrial OS=Capsicum annuum GN=SODA PE=2 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.798e-99
Identity = 171/228 (75.00%), Postives = 192/228 (84.21%), Query Frame = 2
Query:   62 MALRSLAIRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVYHKECP 745
            MALR+L  +K      +    LR +QT +LPDL YDY ALEPAISGEIMQLHHQKHHQ Y+TNYN A++QL  A+NK D+ TV +LQGAIKFNGGGH+NHS+FWKNLAP  EGGGEPP  SLG AIDT+FGSLEA+IQKM+AEGAALQGSGWVWLGLD E KRLV+ETTANQDPLV K P LVPLLGIDVWEHAYYL YKNVKPDYLKNIW V++WKYA++VY KECP
Sbjct:    1 MALRNLMTKKPFAGILTFRQQLRCVQTFSLPDLSYDYGALEPAISGEIMQLHHQKHHQTYITNYNNALQQLHDAINKGDSPTVAKLQGAIKFNGGGHINHSVFWKNLAPTREGGGEPPKGSLGSAIDTNFGSLEAVIQKMNAEGAALQGSGWVWLGLDKELKRLVIETTANQDPLVIKGPNLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWKVINWKYAAEVYEKECP 228          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_ARATH (Superoxide dismutase [Mn], mitochondrial OS=Arabidopsis thaliana GN=SODA PE=1 SV=2)

HSP 1 Score: 361.688 bits (927), Expect = 3.067e-99
Identity = 173/229 (75.55%), Postives = 195/229 (85.15%), Query Frame = 2
Query:   62 MALRSLAIRKAIGLGKSVG---LGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVYHKE 739
            MA+R +A RK +   K      L +RG+QT TLPDLPYDY ALEPAISGEIMQ+HHQKHHQAYVTNYN A+EQL QA+NK D STVV+LQ AIKFNGGGHVNHSIFWKNLAP  EGGGEPP  SLG AID HFGSLE L++KMSAEGAA+QGSGWVWLGLD E K+LVV+TTANQDPLVTK  +LVPL+GIDVWEHAYYL YKNV+P+YLKN+W V++WKYAS+VY KE
Sbjct:    1 MAIRCVASRKTLAGLKETSSRLLRIRGIQTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPKGSLGSAIDAHFGSLEGLVKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEKE 229          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM1_MAIZE (Superoxide dismutase [Mn] 3.1, mitochondrial OS=Zea mays GN=SODA.4 PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.474e-93
Identity = 165/230 (71.74%), Postives = 186/230 (80.87%), Query Frame = 2
Query:   62 MALRSLAIRKAI-----GLGK--SVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVY 730
            MALR+LA +K +     G G+  +     RG+ TVTLPDL YD+ ALEPAISGEIM+LHHQKHH  YV NYNKA+EQL  A++K D S VVQLQ AIKFNGGGHVNHSIFWKNL P+ EGGGEPPH  LGWAID  FGS EAL++KM+AEGAALQGSGWVWL LD E K++ VETTANQDPLVTK  +LVPLLGIDVWEHAYYL YKNV+PDYL NIW VM+WKYA +VY
Sbjct:    1 MALRTLASKKVLSFPFGGAGRPLAAAASARGVTTVTLPDLSYDFGALEPAISGEIMRLHHQKHHATYVANYNKALEQLETAVSKGDASAVVQLQAAIKFNGGGHVNHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKKMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVY 230          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_ORYSJ (Superoxide dismutase [Mn], mitochondrial OS=Oryza sativa subsp. japonica GN=SODA PE=2 SV=2)

HSP 1 Score: 341.658 bits (875), Expect = 3.284e-93
Identity = 164/226 (72.57%), Postives = 180/226 (79.65%), Query Frame = 2
Query:   62 MALRSLAIRK---AIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVY 730
            MALR+LA RK   A  L  +     RG+ TV LPDLPYDY ALEPAISGEIM+LHHQKHH  YV NYNKA+EQL  A+ K D   +V LQ AIKFNGGGHVNHSIFW NL P+ EGGG+PPH+ LGWAID  FGS EAL++KMSAEGAALQGSGWVWL LD E K+L VETTANQDPLVTK   LVPLLGIDVWEHAYYL YKNV+PDYL NIW VM+WKYA +VY
Sbjct:    1 MALRTLASRKTLAAAALPLAAAAAARGVTTVALPDLPYDYGALEPAISGEIMRLHHQKHHATYVANYNKALEQLDAAVAKGDAPAIVHLQSAIKFNGGGHVNHSIFWNNLKPISEGGGDPPHAKLGWAIDEDFGSFEALVKKMSAEGAALQGSGWVWLALDKEAKKLSVETTANQDPLVTKGANLVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVY 226          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM4_MAIZE (Superoxide dismutase [Mn] 3.4, mitochondrial OS=Zea mays GN=SODA.3 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 4.289e-93
Identity = 164/228 (71.93%), Postives = 183/228 (80.26%), Query Frame = 2
Query:   62 MALRSLAIRKAI-----GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVY 730
            MALR+LA + A+     G  +      RG+ TV LPDL YD+ ALEPAISGEIM+LHHQKHH  YV NYNKA+EQL  A+ K D S VVQLQGAIKFNGGGHVNHSIFWKNL P+ EGGGEPPH  LGWAID  FGS EAL+++M+AEGAALQGSGWVWL LD E K+L VETTANQDPLVTK  +LVPLLGIDVWEHAYYL YKNV+PDYL NIW VM+WKYA +VY
Sbjct:    1 MALRTLASKNALSFALGGAARPSAASARGVTTVALPDLSYDFGALEPAISGEIMRLHHQKHHATYVGNYNKALEQLDAAVAKGDASAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVY 228          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM3_MAIZE (Superoxide dismutase [Mn] 3.3, mitochondrial OS=Zea mays GN=SODA.2 PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 6.848e-91
Identity = 159/228 (69.74%), Postives = 181/228 (79.39%), Query Frame = 2
Query:   62 MALRSLAIRKAI-----GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVY 730
            MALR+LA + A+     G  +      RG+ TV LPDL YD+ ALEP ISGEIM+LHHQK+H  YV NYNKA+EQ+   + K D S VVQLQGAIKFNGGGHVNHSIFWKNL P+ EGGGEPPH  LGWAID  FGS EAL+++M+AEGAALQGSGWVWL LD E K++ VETTANQDPLVTK  +LVPLLGIDVWEHAYYL YKNV+PDYL NIW VM+WKYA +VY
Sbjct:    1 MALRTLASKNALSFALGGAARPSAESARGVTTVALPDLSYDFGALEPVISGEIMRLHHQKNHATYVVNYNKALEQIDDVVVKGDDSAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVY 228          
BLAST of EY720328 vs. ExPASy Swiss-Prot
Match: SODM_PEA (Superoxide dismutase [Mn], mitochondrial OS=Pisum sativum GN=SODA PE=2 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 4.439e-90
Identity = 166/238 (69.75%), Postives = 186/238 (78.15%), Query Frame = 2
Query:   62 MALRSLAIRKAIGL-----GKSVGLGL-------RGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLPYKNVKPDYLKNIWNVMDWKYASDVYHKE 739
            MA R+L  RK +        K +G  +       RGL   TLPDL YDY ALEP ISGEIMQ+HHQKHHQ Y+TNYNKA+EQL  A+ K DTST V+LQ AIKFNGGGH+NHSIFWKNLAPV EGGGEPP  SLGWAIDT+FGSLEALIQK++AEGAALQ     WLGLD + KRLVVETT  QDPLVTK  +LVPLLGIDVWEHAYYL YKNV+PDYLKNIW V++WK+AS+VY KE
Sbjct:    1 MAARTLLCRKTLSSVLRNDAKPIGAAIAAASTQSRGLHVFTLPDLAYDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLHDAVAKADTSTTVKLQNAIKFNGGGHINHSIFWKNLAPVSEGGGEPPKESLGWAIDTNFGSLEALIQKINAEGAALQ-----WLGLDKDLKRLVVETT--QDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKHASEVYEKE 231          
The following BLAST results are available for this feature:
BLAST of EY720328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
SODM_HEVBR1.203e-10379.22Superoxide dismutase [Mn], mitochondrial OS=Hevea ... [more]
SODM_NICPL3.501e-10376.32Superoxide dismutase [Mn], mitochondrial OS=Nicoti... [more]
SODM_PRUPE1.019e-10276.75Superoxide dismutase [Mn], mitochondrial OS=Prunus... [more]
SODM_CAPAN1.798e-9975.00Superoxide dismutase [Mn], mitochondrial OS=Capsic... [more]
SODM_ARATH3.067e-9975.55Superoxide dismutase [Mn], mitochondrial OS=Arabid... [more]
SODM1_MAIZE1.474e-9371.74Superoxide dismutase [Mn] 3.1, mitochondrial OS=Ze... [more]
SODM_ORYSJ3.284e-9372.57Superoxide dismutase [Mn], mitochondrial OS=Oryza ... [more]
SODM4_MAIZE4.289e-9371.93Superoxide dismutase [Mn] 3.4, mitochondrial OS=Ze... [more]
SODM3_MAIZE6.848e-9169.74Superoxide dismutase [Mn] 3.3, mitochondrial OS=Ze... [more]
SODM_PEA4.439e-9069.75Superoxide dismutase [Mn], mitochondrial OS=Pisum ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-H10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720328 ID=EY720328; Name=EY720328; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGCGTCTCGGTTGAATTTCGAACGATCAAGAAACGTCACCG
TTTCATTCGCGATGGCTCTCCGTTCGCTTGCCATCAGAAAAGCTATAGGC
TTGGGTAAATCCGTAGGATTAGGGCTGCGTGGACTGCAGACGGTCACGCT
GCCTGATCTTCCGTACGATTACAGCGCTTTGGAGCCGGCGATTAGCGGAG
AGATTATGCAGCTTCATCACCAGAAGCATCACCAGGCTTACGTTACTAAC
TACAACAAGGCGGTCGAGCAGCTTTTTCAAGCTTTGAACAAAGTCGATAC
GTCCACCGTCGTCCAGTTGCAGGGCGCTATCAAGTTCAACGGCGGAGGTC
ATGTCAACCACTCAATTTTCTGGAAGAATCTTGCTCCTGTTCACGAAGGA
GGTGGCGAGCCACCACATAGTTCCCTTGGTTGGGCTATTGACACGCATTT
TGGTTCTCTGGAAGCATTGATACAAAAGATGAGTGCTGAGGGTGCAGCTT
TGCAGGGCTCTGGATGGGTGTGGCTTGGTTTGGATACAGAGTTTAAAAGG
CTTGTGGTTGAAACTACTGCAAATCAGGATCCGCTGGTGACTAAAGCCCC
AACTCTGGTTCCTTTGCTTGGTATAGATGTTTGGGAGCATGCATACTACC
TACCGTACAAGAATGTCAAACCAGATTATCTGAAAAACATTTGGAACGTA
ATGGACTGGAAGTATGCTAGTGATGTGTATCACAAAGAATGCCCTTGAGC
TTGGAGCTCTTCCTTGACCATGGAGTTCTTCGTTTGATCTGGCGTCTCTC
CTGGGGTGCAAGAGACCAATATACTTGCACCTTTCCCGCTTAAGTGACAA
TTAACCATATTTGGC
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