CX069806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069806 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.123e-21 Identity = 81/272 (29.78%), Postives = 122/272 (44.85%), Query Frame = -3 Query: 35 KVPPSDDPITGVRSKDVISSQPT-VSARIFIPK----------VTNP-DKQKFPLLLYMHGGGF*TLSAFAKPYHDFCNTISSQANAIVVSVEYGLFPDRPIPACYEGSWAALKWVASHVSGNGPDPWLNHHADLG-RVFIGGDSAGGNIAHTLAFRVGSIGLSGVNLVRVTMVHPFFGGTE----------------DDEMWLYMCANNDG-----PQDPRMKPPAEDLARLGCERVLIFVAERDYLCPAGKNYYEELKKRGWKGRVELVE 748 KVP + +P+ GV S DVI + T + +R++ P + NP D + P++++ HGG F SA + Y C + A+VVSV Y P+ P Y+ WA LKWV S WL D R+F+ GDS+GGNI H +A R S ++++ +++P FGGTE D W + +G P P ++ L L + L+ VA D + Y E LKK G + ++ +E Sbjct: 52 KVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS-------SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLE 313
BLAST of CX069806 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21 Identity = 78/265 (29.43%), Postives = 113/265 (42.64%), Query Frame = -3 Query: 62 KVPPSDDPITGVRSKDVISSQPTVSARIFIP------------KVTNP--DKQKFPLLLYMHGGGF*TLSAFAKPYHDFCNTISSQANAIVVSVEYGLFPDRPIPACYEGSWAALKWVASHVSGNGPDPWLNHHADLG-RVFIGGDSAGGNIAHTLAFRVGSIGLSGVNLVRVTMVHPFFGGTE----------------DDEMWLYMC-----ANNDGPQDPRMKPPAEDLARLGCERVLIFVAERDYLCPAGKNYYEELKKRG 748 KVP + P+ GV S D + S + RI+ P ++T P + P+L++ HGG F SA + Y FC + + +VVSV+Y P+ P Y+ W AL WV S V WL D V++ GDS+GGNIAH +A R + GV ++ ++HP FGG E D W + + D P P + L + + L+ VA D + Y + LKK G Sbjct: 52 KVPANSFPLDGVFSFDHVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV-------WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATN---EGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTG 306
BLAST of CX069806 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.347e-20 Identity = 83/285 (29.12%), Postives = 125/285 (43.86%), Query Frame = -3 Query: 5 KVPPSDDPITGVRSKDV-ISSQPTVSARIFIPKVTNPDKQK-------------FPLLLYMHGGGF*TLSAFAKPYHDFCNTISSQANAIVVSVEYGLFPDRPIPACYEGSWAALKWVASHVSGNGPDPWLNHHADLG-RVFIGGDSAGGNIAHTLAFRVGSIGLSGVNLVRVTMVHPFFGGTE----------------DDEMWLYMCANNDG-----PQDPRMKPPAEDLARLGCERVLIFVAERDYLCPAGKNYYEELKKRGWKGRVELVEHLDEKHV-FYL 748 KV + +P+ GV S DV I + + +R++ P + ++ P++L+ HGG F SA + Y C + +VVSV Y P+ P P Y+ W AL WV S WL D +F+ GDS+GGNIAH +A R G SG++++ +++P FGG E D W + +G P P + L + + L+ VA D + Y E LKK G + V+L+ HL++ V FYL Sbjct: 52 KVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSR-------SWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQE--VKLM-HLEKATVGFYL 323
BLAST of CX069806 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.550e-19 Identity = 80/282 (28.37%), Postives = 113/282 (40.07%), Query Frame = -3 Query: 32 KVPPSDDPITGVRSKDVISSQPT-VSARIF-----------IPKVTNP---------DKQKFPLLLYMHGGGF*TLSAFAKPYHDFCNTISSQANAIVVSVEYGLFPDRPIPACYEGSWAALKWVASHVSGNGPDPWLNHHADL-GRVFIGGDSAGGNIAHTLAFRVGSIGLSGVNLVRVTMVHPFFGGTE----------------DDEMWLYMC-----ANNDGPQDPRMKPPAEDLARLGCERVLIFVAERDYLCPAGKNYYEELKKRGWKGRVELVEH 748 +VP + P+ GV S D I Q + RI+ VT P + FP++++ HGG F SA + Y C + +VVSV Y P+ P Y+ W ALKWV S P++ D RVF+ GDS+GGNIAH +A R GV + +++ FGGTE D W + A+ D P P L L + LI V+ D C Y + L++ G +V E+ Sbjct: 52 RVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD---EGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCEN 323
BLAST of CX069806 vs. ExPASy Swiss-Prot
Match: YFZ3_SCHPO (AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe GN=SPAC1039.03 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.240e-12 Identity = 47/145 (32.41%), Postives = 71/145 (48.97%), Query Frame = -3 Query: 245 VSARIFIPKVTNPDKQKFPLLLYMHGGGF*TLSAFAKPYHDFCNTISSQANAIVVSVEYGLFPDRPIPACYEGSWAALKWVASHVSGNGPDPWLNHHADLGRVFIGGDSAGGNIAHTLAFRVGSIGLSGVNLVRVTMVHPFFGGT 679 V +RIF P T P+ +P L+ HGGG+ + + F + QA +VV+V+Y L P+ P PAC + W AL + + G +P ++ +GG SAGGNIA L+ +V + + LV +V P T Sbjct: 84 VPSRIFRPHGTAPEGG-WPCFLWFHGGGW--VLGNINTENSFATHMCEQAKCVVVNVDYRLAPEDPFPACIDDGWEALLYCYENADTLGINP--------NKIAVGGSSAGGNIAAVLSHKVAASPANFPPLVLQLLVVPVCDNT 217 The following BLAST results are available for this feature:
BLAST of CX069806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069806 ID=CX069806; Name=CX069806; organism=Citrus sinensis; type=EST; length=768bpback to top |