CX069619

Overview
NameCX069619
Unique NameCX069619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:633..1191. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 3.627e-57
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 327
            FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN+KAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKAL SFRSNP+N
Sbjct:  170 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALASFRSNPTN 278          
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 8.933e-56
Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 327
            FVLVYTVFSATDPKRSARDSHVP+LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN  + WDDHWIFWVGPFVGALAAAAYHQY+LRAAAIKALGSFRSNP+N
Sbjct:  174 FVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIKALGSFRSNPTN 282          
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 1.524e-55
Identity = 103/109 (94.50%), Postives = 105/109 (96.33%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 327
            FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN  KAWDDHWIFW GPF+GALAAAAYHQYILRAAAIKALGSFRSNPSN
Sbjct:  174 FVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSFRSNPSN 282          
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 3.394e-55
Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 327
            FVLVYTVFSATDPKRSARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN+KAWDD WIFWVGPF+GALAAAAYHQYILRA+AIKALGSFRSN +N
Sbjct:  172 FVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKALGSFRSNATN 280          
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.743e-51
Identity = 95/106 (89.62%), Postives = 100/106 (94.34%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 318
            FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSFG AVI+NNDKAWDD WI+WVGPFVGA  AA YHQYILR +AIKALGSFRSN
Sbjct:  181 FVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKALGSFRSN 286          
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 2.974e-51
Identity = 96/106 (90.57%), Postives = 98/106 (92.45%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 318
            FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAVIYN DK WDDHWIFWVGP VGA  AA YHQYILRA AIKALGSFRSN
Sbjct:  184 FVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALGSFRSN 289          
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.072e-51
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 318
            FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVI+NN+KAW +HWIFWVGPFVGA  AA YHQYILRA AIKALGSFRSN
Sbjct:  184 FVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSN 289          
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 6.625e-51
Identity = 96/105 (91.43%), Postives = 100/105 (95.24%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRS 315
            FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN+KAWDD WIFWVGP +GA AAA YHQ+ILRAAAIKALGSF S
Sbjct:  179 FVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALGSFGS 283          
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 8.652e-51
Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 318
            FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+YN DK WDDHWIFWVGP +GA  AA YHQYILRA AIKALGSFRSN
Sbjct:  186 FVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALGSFRSN 291          
BLAST of CX069619 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.130e-50
Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 1
Query:    1 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNP 321
            FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN DKAWD HWIFWVGPF GA  AA YHQ++LRA AIKALGSFRS P
Sbjct:  178 FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALGSFRSQP 284          
The following BLAST results are available for this feature:
BLAST of CX069619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PIP28_ARATH3.627e-5797.25Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP1_ATRCA8.933e-5693.58Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP26_ORYSJ1.524e-5594.50Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP27_ARATH3.394e-5593.58Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP27_MAIZE1.743e-5189.62Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP21_MAIZE2.974e-5190.57Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP21_ORYSJ5.072e-5190.57Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP24_ARATH6.625e-5191.43Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP22_MAIZE8.652e-5188.68Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP25_ARATH1.130e-5087.85Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11G03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11G03-N5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069619 ID=CX069619; Name=CX069619; organism=Citrus sinensis; type=EST; length=548bp
TTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGC
TCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTG
TGTTCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAAC
CCTGCTAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTG
GGATGACCATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTG
CAGCGGCATACCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTG
GGATCATTCCGCAGCAACCCTTCAAACTAAGAAAGCAAATTATGATGAAT
ATGAACCACCAACCAGAATAGCTTTTTCCTTTCTCTCTTTCTGTTATTTG
TTCGCTTGTGTCTATTATGAGATGATGTTTGCTATGATAATTATGACCCT
TCTCTTTATTTTTCCATTTCATATTTTGATTGAGTAGCTATAGCTTTGTC
TCCGTGAATCATTGTTAATGAGTAGTGGTGATGTTTGTTTTTTCCTAA
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